RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 KrasP32883 189 aa6.5□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Resp18P47939 175 aa6.5□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Wfdc18P62810 74 aa6.5□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Gnb1P62874 340 aa6.5□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Cln5Q3UMW8 341 aa6.5□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Vdac1Q60932 296 aaKnown RBP6.5□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Znf574Q8BY46 900 aa6.5□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Mbnl2Q8C181 373 aaKnown RBP6.5□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Klhdc3Q8VEM9 382 aa6.5□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Olfr1202Q8VF98 309 aa6.5□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Ms4a4cQ9D3F6 226 aa6.5□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Tnfrsf22Q9ER62 198 aa6.5□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Plce1Q8K4S1 2282 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Trav16A0A075B653 116 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Scgb1b11A0A087WQJ0 93 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Gm28845A0A087WR76 214 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Olfr1328B1ARV2 313 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Gm5225J3QPL3 108 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 IfnabL7MTU6 190 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Wnt2P21552 360 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Ypel3P61237 119 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Sfrp2P97299 295 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 AY761185Q5ERI8 94 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Prss3Q792Z0 246 aaKnown RBP6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Ifna13Q80SU4 189 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Nmes1Q810Q5 83 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Q8C3M9 231 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Olfr362Q8VGV7 317 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Ddit4lQ8VHZ5 193 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Derl1Q99J56 251 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 PacrgQ9DAK2 241 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Gm28729A0A1B0GSW2 409 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Gm13030A2APQ6 143 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Mmp23O88676 391 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 P01728 117 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 P01896 185 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Ifna15Q61718 190 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Wdr90Q6ZPG2 1874 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Gpr4Q8BUD0 365 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Olfr355Q8VFP6 310 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Olfr262Q8VFV8 312 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Olfr922Q8VG50 311 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 UmodQ91X17 642 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Gm10306Q9CUK2 115 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Ociad2Q9D8W7 154 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Phf7Q9DAG9 307 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Vmn1r50Q9EP51 310 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Mki67E9PVX6 3177 aaKnown RBP6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Olfr1369-ps1A0A140T8K7 317 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Ctxnd1A0A1B0GST9 59 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 1810011H11RikE9PVZ2 95 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Ascl5M0QWB7 188 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 P06323 132 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 GzmaP11032 260 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Upk2P38575 184 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Klf16P58334 251 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Otx2P80206 289 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 PtafrQ62035 341 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Olfr263Q7TQT8 317 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Olfr917Q7TRC3 309 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Defa22Q8C1N8 93 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Samd7Q8C8Y5 445 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Neurl3Q8CJC5 254 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Rab40cQ8VHQ4 281 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Defb7Q91V70 71 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Ppp1r35Q9D8C8 260 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 PyyQ9EPS2 98 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Chst5Q9QUP4 395 aa6.49□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Trbv29A0A0G2LB96 114 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Trav12-1A0N8R1 115 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Gm4884E9PVP9 694 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Gm14408E9Q6B9 136 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Vipr2P41588 437 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Bpifa1P97361 278 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Znf329Q6GQR8 522 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 IslrQ6GU68 428 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Ammecr1lQ8JZZ6 310 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Vstm2aQ8R0A6 236 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Vmn1r4Q8R2D3 297 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Olfr1457Q8VFK3 317 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Olfr1447Q8VFX3 309 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Scgb3a2Q920H1 91 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Cln8Q9QUK3 288 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 SvilQ8K4L3 2170 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Igkv1-135A0A0B4J1H7 120 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Cdc34bA0A140T8I4 237 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Gm20815J3KMI0 227 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Gm20914J3QME2 227 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Gm20918J3QN17 227 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 BatfO35284 125 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 P01803 113 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Ccr8P56484 353 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 SeleQ00690 612 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Gm21292Q78EE2 227 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 YbeyQ8CAV0 164 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Tmem70Q921N7 253 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Tnfrsf13cQ9D8D0 175 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Gtsf1Q9DAN6 167 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Tbx21Q9JKD8 530 aa6.48□□□□□ -1.37
Bdnf-209ENSMUST00000111050 Cldn14Q9Z0S3 239 aa6.48□□□□□ -1.37
Retrieved 100 of 22,080 RNA–protein pairs in 44.4 ms