RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Eif2b2Q99LD9 351 aa17.41■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Fam219aQ9D772 157 aa17.41■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Eif3fQ9DCH4 361 aa17.41■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Timm9Q9WV98 89 aaKnown RBP17.41■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Trav7n-5A0A075B604 112 aa17.4■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Tcrg-C4A0A075B6C7 190 aa17.4■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Ly6g6fB2RXM6 300 aa17.4■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Bpifa2P07743 235 aa17.4■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Mcpt8P43430 247 aa17.4■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Ap2s1P62743 142 aa17.4■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 SlbpP97440 275 aaKnown RBP17.4■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Mindy2Q6PDI6 601 aa17.4■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Ifna13Q80SU4 189 aa17.4■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Cd300eQ8K249 196 aa17.4■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Olfr523Q8VFE7 317 aa17.4■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 St3gal6Q8VIB3 329 aa17.4■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Slc25a10Q9QZD8 287 aa17.4■□□□□ 0.38
Ccdc88a-202ENSMUST00000109477 Olfr267A2AM35 313 aa17.39■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Msl3l2G3X992 371 aa17.39■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Defb2P82020 71 aa17.39■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Q0VG49 157 aa17.39■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Stoml3Q6PE84 287 aa17.39■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Thoc7Q7TMY4 204 aaKnown RBP17.39■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Rnf170Q8CBG9 286 aa17.39■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Ms4a8Q99N10 290 aa17.39■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Olfr661Q99NH4 319 aa17.39■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Mrpl42Q9CPV3 142 aa17.39■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Trav18A0A075B656 109 aa17.38■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Cldn34dA2AGU5 210 aa17.38■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Arl16B1ATY8 173 aa17.38■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Cdkn1aP39689 159 aa17.38■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Lsm5P62322 91 aa17.38■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Rbp4Q00724 201 aa17.38■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Npy4rQ61041 375 aa17.38■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Guk1Q64520 198 aa17.38■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Dctn4Q8CBY8 467 aa17.38■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Rpp21Q8R040 150 aa17.38■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Olfr135Q8VEY4 312 aa17.38■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Olfr736Q8VFT6 312 aa17.38■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Olfr46Q8VGJ4 318 aa17.38■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 HpxQ91X72 460 aa17.38■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Ap1s2Q9DB50 160 aa17.38■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 C2cd3Q52KB6 2323 aa17.38■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Bahcc1Q3UHR0 2643 aa17.38■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Ighv5-2A0A0A6YVX8 117 aa17.38■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Gm6526G3X9Q9 198 aa17.38■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 E030018B13RikJ3QMS9 113 aa17.38■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 PipP02816 146 aa17.38■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Ifna6P07350 189 aa17.38■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Fgf8P37237 268 aa17.38■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Slc25a4P48962 298 aaKnown RBP17.38■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Gabra1P62812 455 aa17.38■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 SgcaP82350 387 aa17.38■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Gpr119Q7TQP3 335 aa17.38■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Rab39bQ8BHC1 213 aa17.38■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Rhbdd2Q8VEK2 361 aa17.38■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Znhit3Q9CQK1 151 aa17.38■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Olfr716Q9EPG6 314 aa17.38■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Ighv1-37A0A0A6YW32 117 aa17.37■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Gm20821J3QPJ2 227 aa17.37■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Olfr117L7N1Z1 317 aa17.37■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Col8a1Q00780 744 aa17.37■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Taar5Q5QD14 337 aa17.37■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 SlaQ60898 281 aa17.37■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Olfr1168Q7TR25 312 aa17.37■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Olfr827Q8VEV5 322 aa17.37■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Olfr130Q8VFC1 317 aa17.37■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Olfr344Q8VFP9 309 aa17.37■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Olfr1154L7MU57 310 aa17.36■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Olfr1053L7MU59 313 aa17.36■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Hist1h1eP43274 219 aaKnown RBP17.36■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Dlx6P70397 175 aa17.36■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Fam220aQ3ZN08 260 aa17.36■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Ltc4sQ60860 150 aa17.36■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Zic4Q61467 341 aa17.36■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Zfp420Q7TMN8 578 aa17.36■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Olfr1341Q7TQV4 312 aa17.36■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Igfbpl1Q80W15 270 aa17.36■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Ankrd55Q8BLD6 626 aa17.36■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Hnf4gQ9WUU6 408 aa17.36■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 St6galnac3Q9WUV2 305 aa17.36■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Olfr573-ps1A0A1B0GRU2 297 aa17.35■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Gm20877J3QPZ4 227 aa17.35■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Sult2a5K7N6K9 285 aa17.35■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Lyplal1Q3UFF7 239 aa17.35■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Reep5Q60870 185 aa17.35■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 St8sia3Q64689 380 aa17.35■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Olfr1474Q7TQQ8 314 aa17.35■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Fbxw26Q8BI58 466 aa17.35■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Znf146Q8BQN6 292 aa17.35■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Harbi1Q8BR93 349 aa17.35■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Olfr133Q8VG94 312 aa17.35■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Sval1Q9D2X6 151 aa17.35■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Olfr943Q9EQ92 314 aa17.35■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 DysfQ9ESD7 2090 aa17.35■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Cep192E9Q4Y4 2514 aaKnown RBP17.35■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Gm14692A2BH01 229 aa17.35■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 4931422A03RikA2BHN9 113 aa17.35■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 Vmn1r229Q8R2A9 306 aa17.35■□□□□ 0.37
Ccdc88a-202ENSMUST00000109477 PbkQ9JJ78 330 aa17.35■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 35.9 ms