RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 A0A1W2PR77 199 aa7.46□□□□□ -1.22
BRCA1-205ENST00000461221 ZNF831Q5JPB2 1677 aa7.45□□□□□ -1.22
BRCA1-205ENST00000461221 D6R8Y8 96 aa7.45□□□□□ -1.22
BRCA1-205ENST00000461221 H3BMM0 161 aa7.45□□□□□ -1.22
BRCA1-205ENST00000461221 TIMM23O14925 209 aa7.45□□□□□ -1.22
BRCA1-205ENST00000461221 CD33P20138 364 aa7.45□□□□□ -1.22
BRCA1-205ENST00000461221 GAGE2AQ6NT46 116 aa7.45□□□□□ -1.22
BRCA1-205ENST00000461221 HEPN1Q6WQI6 88 aa7.45□□□□□ -1.22
BRCA1-205ENST00000461221 MRPL52Q86TS9 123 aaKnown RBP7.45□□□□□ -1.22
BRCA1-205ENST00000461221 LURAP1LQ8IV03 231 aa7.45□□□□□ -1.22
BRCA1-205ENST00000461221 RNF126Q9BV68 326 aa7.45□□□□□ -1.22
BRCA1-205ENST00000461221 MBNL3Q9NUK0 354 aaKnown RBP7.45□□□□□ -1.22
BRCA1-205ENST00000461221 SMCHD1A6NHR9 2005 aa7.45□□□□□ -1.22
BRCA1-205ENST00000461221 CCDC88CQ9P219 2028 aa7.45□□□□□ -1.22
BRCA1-205ENST00000461221 TRBV24-1A0A075B6N3 115 aa7.45□□□□□ -1.22
BRCA1-205ENST00000461221 HIST1H2BLQ99880 126 aa7.45□□□□□ -1.22
BRCA1-205ENST00000461221 SCN1AP35498 2009 aa7.45□□□□□ -1.22
BRCA1-205ENST00000461221 TRGV1A0A0A0MS02 117 aa7.45□□□□□ -1.22
BRCA1-205ENST00000461221 MPZP25189 248 aa7.45□□□□□ -1.22
BRCA1-205ENST00000461221 DUTP33316 252 aaKnown RBP7.45□□□□□ -1.22
BRCA1-205ENST00000461221 TIMP3P35625 211 aa7.45□□□□□ -1.22
BRCA1-205ENST00000461221 SRSF7Q16629 238 aaKnown RBP eCLIP7.45□□□□□ -1.22
BRCA1-205ENST00000461221 OR10W1Q8NGF6 305 aa7.45□□□□□ -1.22
BRCA1-205ENST00000461221 LINC00477Q96M19 166 aa7.45□□□□□ -1.22
BRCA1-205ENST00000461221 OOSP1A8MZH6 123 aa7.45□□□□□ -1.22
BRCA1-205ENST00000461221 LTBRP36941 435 aa7.45□□□□□ -1.22
BRCA1-205ENST00000461221 ZNF138P52744 262 aa7.45□□□□□ -1.22
BRCA1-205ENST00000461221 ID3Q02535 119 aa7.45□□□□□ -1.22
BRCA1-205ENST00000461221 RNF5Q99942 180 aa7.45□□□□□ -1.22
BRCA1-205ENST00000461221 COLQQ9Y215 455 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-205ENST00000461221 LSM4Q9Y4Z0 139 aaKnown RBP7.45□□□□□ -1.22
BRCA1-205ENST00000461221 IGKV2-40A0A087WW87 121 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-205ENST00000461221 TRAV8-3A0A0A6YYJ7 113 aa7.45□□□□□ -1.22
BRCA1-205ENST00000461221 IGKV1D-43A0A0B4J1Z2 117 aa7.45□□□□□ -1.22
BRCA1-205ENST00000461221 IGKV1D-13A0A0B4J2D9 117 aa7.45□□□□□ -1.22
BRCA1-205ENST00000461221 FGF16O43320 207 aa7.45□□□□□ -1.22
BRCA1-205ENST00000461221 TIAF1O95411 115 aa7.45□□□□□ -1.22
BRCA1-205ENST00000461221 IGKV2D-40P01614 121 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-205ENST00000461221 IGKV1-13P0DP09 117 aa7.45□□□□□ -1.22
BRCA1-205ENST00000461221 C9orf106Q8NAJ2 232 aa7.45□□□□□ -1.22
BRCA1-205ENST00000461221 WBP1Q96G27 269 aa7.45□□□□□ -1.22
BRCA1-205ENST00000461221 DEPPQ9NTK1 212 aa7.45□□□□□ -1.22
BRCA1-205ENST00000461221 COX11Q9Y6N1 276 aa7.45□□□□□ -1.22
BRCA1-205ENST00000461221 BRWD1Q9NSI6 2320 aa7.44□□□□□ -1.22
BRCA1-205ENST00000461221 ASCC3Q8N3C0 2202 aaKnown RBP7.44□□□□□ -1.22
BRCA1-205ENST00000461221 GUSBP1Q15486 140 aa7.44□□□□□ -1.22
BRCA1-205ENST00000461221 TIMM21Q9BVV7 248 aa7.44□□□□□ -1.22
BRCA1-205ENST00000461221 ZFC3H1O60293 1989 aaKnown RBP7.44□□□□□ -1.22
BRCA1-205ENST00000461221 RAMP3O60896 148 aa7.44□□□□□ -1.22
BRCA1-205ENST00000461221 CTSBP07858 339 aa7.44□□□□□ -1.22
BRCA1-205ENST00000461221 CEACAM1P13688 526 aa7.44□□□□□ -1.22
BRCA1-205ENST00000461221 HIST3H2BBQ8N257 126 aa7.44□□□□□ -1.22
BRCA1-205ENST00000461221 MIA3Q5JRA6 1907 aa7.44□□□□□ -1.22
BRCA1-205ENST00000461221 ARID1AO14497 2285 aa7.44□□□□□ -1.22
BRCA1-205ENST00000461221 RGPD4Q7Z3J3 1758 aa7.44□□□□□ -1.22
BRCA1-205ENST00000461221 ZNF124Q15973 351 aa7.44□□□□□ -1.22
BRCA1-205ENST00000461221 ATRAIDQ6UW56 229 aa7.44□□□□□ -1.22
BRCA1-205ENST00000461221 NEGR1Q7Z3B1 354 aa7.44□□□□□ -1.22
BRCA1-205ENST00000461221 TRBV7-1A0A0A6YYK4 115 aa7.44□□□□□ -1.22
BRCA1-205ENST00000461221 A0A1B0GW64 132 aa7.44□□□□□ -1.22
BRCA1-205ENST00000461221 CELA3BP08861 270 aa7.44□□□□□ -1.22
BRCA1-205ENST00000461221 RSPO4Q2I0M5 234 aaPredicted RBP7.44□□□□□ -1.22
BRCA1-205ENST00000461221 LYZL1Q6UWQ5 148 aa7.44□□□□□ -1.22
BRCA1-205ENST00000461221 TRGV9Q99603 122 aa7.44□□□□□ -1.22
BRCA1-205ENST00000461221 LY96Q9Y6Y9 160 aa7.44□□□□□ -1.22
BRCA1-205ENST00000461221 TRIP11Q15643 1979 aa7.44□□□□□ -1.22
BRCA1-205ENST00000461221 ARAP2Q8WZ64 1704 aa7.44□□□□□ -1.22
BRCA1-205ENST00000461221 TRAV40A0A0B4J280 105 aa7.43□□□□□ -1.22
BRCA1-205ENST00000461221 SOCS3O14543 225 aa7.43□□□□□ -1.22
BRCA1-205ENST00000461221 NCR2O95944 276 aa7.43□□□□□ -1.22
BRCA1-205ENST00000461221 INAFM2P0DMQ5 153 aa7.43□□□□□ -1.22
BRCA1-205ENST00000461221 C1orf194Q5T5A4 169 aa7.43□□□□□ -1.22
BRCA1-205ENST00000461221 MINOS1Q5TGZ0 78 aa7.43□□□□□ -1.22
BRCA1-205ENST00000461221 LHFPL4Q7Z7J7 247 aa7.43□□□□□ -1.22
BRCA1-205ENST00000461221 LY6G5BQ8NDX9 201 aa7.43□□□□□ -1.22
BRCA1-205ENST00000461221 CHAC1Q9BUX1 264 aa7.43□□□□□ -1.22
BRCA1-205ENST00000461221 SNHG12Q9BXW3 62 aa7.43□□□□□ -1.22
BRCA1-205ENST00000461221 MINOS1-NBL1R4GNA1 71 aa7.43□□□□□ -1.22
BRCA1-205ENST00000461221 CD55P08174 381 aa7.43□□□□□ -1.22
BRCA1-205ENST00000461221 ZNF638Q14966 1978 aaKnown RBP7.43□□□□□ -1.22
BRCA1-205ENST00000461221 A0A1B0GWJ7 208 aa7.43□□□□□ -1.22
BRCA1-205ENST00000461221 SRD5A1P18405 259 aa7.43□□□□□ -1.22
BRCA1-205ENST00000461221 LINC00114Q6XXX2 140 aa7.43□□□□□ -1.22
BRCA1-205ENST00000461221 SHISA3A0PJX4 238 aa7.43□□□□□ -1.22
BRCA1-205ENST00000461221 PRIMA1Q86XR5 153 aa7.43□□□□□ -1.22
BRCA1-205ENST00000461221 WFDC12Q8WWY7 111 aa7.43□□□□□ -1.22
BRCA1-205ENST00000461221 SLC25A28Q96A46 364 aa7.43□□□□□ -1.22
BRCA1-205ENST00000461221 CSTL1Q9H114 145 aa7.43□□□□□ -1.22
BRCA1-205ENST00000461221 NEUROG3Q9Y4Z2 214 aa7.43□□□□□ -1.22
BRCA1-205ENST00000461221 IGHV3-73A0A0B4J1V6 119 aa7.43□□□□□ -1.22
BRCA1-205ENST00000461221 A6NNC1 897 aa7.43□□□□□ -1.22
BRCA1-205ENST00000461221 C9orf153Q5TBE3 101 aa7.43□□□□□ -1.22
BRCA1-205ENST00000461221 LAIR2Q6ISS4 152 aa7.43□□□□□ -1.22
BRCA1-205ENST00000461221 TREML4Q6UXN2 200 aa7.43□□□□□ -1.22
BRCA1-205ENST00000461221 C1orf159Q96HA4 380 aa7.43□□□□□ -1.22
BRCA1-205ENST00000461221 ZNF625Q96I27 306 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-205ENST00000461221 SRRM4A7MD48 611 aaKnown RBP7.42□□□□□ -1.22
BRCA1-205ENST00000461221 SH2D1AO60880 128 aa7.42□□□□□ -1.22
BRCA1-205ENST00000461221 AMBPP02760 352 aa7.42□□□□□ -1.22
BRCA1-205ENST00000461221 TCRAP04437 139 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms