RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Fbxw26Q8BI58 466 aa13.54□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Olfr1448Q8VFX1 314 aa13.54□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Slc25a2Q99ML6 265 aa13.54□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 SelenofQ9ERR7 162 aa13.54□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Esp23A8R0V5 104 aa13.54□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Olfr218E9PWV2 313 aa13.54□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Nudt10P0C027 164 aa13.54□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Nudt11P0C028 164 aa13.54□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Defb46Q4QY34 57 aa13.54□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Zfp954Q7TNU5 416 aa13.54□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 1700008P02RikQ9DAJ8 175 aa13.54□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Cacna1bO55017 2327 aa13.53□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Ctxnd2A0A1B0GQX3 59 aa13.53□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Olfr978E9Q985 311 aa13.53□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Gm15292L7N231 93 aa13.53□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Gfra3O35118 397 aa13.53□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Fgf12P61329 243 aa13.53□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Depp1Q8K2F3 205 aa13.53□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Rab1bQ9D1G1 201 aa13.53□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Tp53bp1P70399 1969 aa13.53□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Tex38A2A8T7 201 aa13.53□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Samt3A2ARK7 233 aa13.53□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Vmn1r194J3JS27 296 aa13.53□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Gosr1O88630 250 aa13.53□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Meox1P32442 253 aa13.53□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Lbx1P52955 282 aa13.53□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 GgnQ80WJ1 673 aa13.53□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Znf385aQ8VD12 386 aaKnown RBP13.53□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Chst5Q9QUP4 395 aa13.53□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Igkv1-131A0A140T8M8 120 aa13.53□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Hoxa6P09092 232 aa13.53□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 CebpeQ6PZD9 281 aa13.53□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Olfr93Q6UAH1 312 aa13.53□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Olfr922Q8VG50 311 aa13.53□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Rbbp6P97868 1790 aaKnown RBP13.53□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Trav5-4A0A075B652 114 aa13.53□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Gm20816Q5FWD4 227 aa13.53□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Pafah1b2Q61206 229 aa13.53□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Ppp1r3cQ7TMB3 317 aa13.53□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Pgam5Q8BX10 288 aa13.53□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Lrrc3bQ8VCH9 259 aa13.53□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Cyb5r3Q9DCN2 301 aaKnown RBP13.53□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Ighv5-12A0A075B5Q4 117 aa13.52□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Zfp2P08043 459 aa13.52□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Spatc1Q148B6 480 aa13.52□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Zfp386Q1WWJ5 626 aa13.52□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Tctn2Q2MV57 700 aa13.52□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Oxgr1Q6IYF8 337 aa13.52□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Olfr959Q9EQ86 311 aa13.52□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 1810011H11RikE9PVZ2 95 aa13.52□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 F2rl1P55086 399 aa13.52□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Spata22Q5SV06 358 aa13.52□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Ms4a3Q920C4 213 aa13.52□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Mrpl13Q9D1P0 178 aaKnown RBP13.52□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Mad2l1bpQ9DCX1 276 aa13.52□□□□□ -0.24
Pcdha9-201ENSMUST00000115659 Mex3aG3UYU0 520 aaKnown RBP13.52□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 Gabrg3P27681 467 aa13.52□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 Zfp941Q3URY5 674 aa13.52□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 Dmrta1Q8CFG4 490 aa13.52□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 Olfr1243Q8VGM7 305 aa13.52□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 Tmem196V9GX04 182 aa13.52□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 Kiaa0100Q5SYL3 2234 aa13.52□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 Col9a3A2ACT7 680 aa13.52□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 Prr32A2AFE9 284 aa13.52□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 Gm2026A2ART4 498 aa13.52□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 Adamtsl5D3Z689 485 aa13.52□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 Rtp3Q5QGU6 474 aa13.52□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 ParlQ5XJY4 377 aa13.52□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 Rgp1Q8BHT7 391 aa13.52□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 AdtrpQ8C138 230 aa13.52□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 CroccQ8CJ40 2009 aa13.52□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 Gltpd2Q8K0R6 321 aa13.51□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 RpeQ8VEE0 228 aa13.51□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 Defb7Q91V70 71 aa13.51□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 Elovl1Q9JLJ5 279 aa13.51□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 Gm13083A2AGW5 501 aa13.51□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 OsmP53347 263 aa13.51□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 Cited1P97769 203 aa13.51□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 Rhbdd2Q8VEK2 361 aa13.51□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 Marf1Q8BJ34 1730 aaKnown RBP13.51□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 FAM186AQ9D9R9 1790 aa13.51□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 Olfr715bE9Q725 315 aa13.51□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 P06323 132 aa13.51□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 GlulP15105 373 aa13.51□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 Zdhhc23Q5Y5T3 425 aa13.51□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 Gm10277Q6R5C6 214 aa13.51□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 Olfr355Q8VFP6 310 aa13.51□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 GpnmbQ99P91 574 aa13.51□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 Gng10Q9CXP8 68 aa13.51□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 Mbnl1Q9JKP5 341 aaKnown RBP13.51□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 Ceacam15A0A0B4J1L0 234 aa13.51□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 P18529 117 aa13.51□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 Cldn18P56857 264 aa13.51□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 Trat1Q3UU67 187 aa13.51□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 Rln3Q8CHK2 141 aa13.51□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 Ighv1-54A0A075B5W5 117 aa13.5□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 Gm6993A0A1W2P738 69 aa13.5□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 SptbP15508 2128 aa13.5□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 Gimap1P70224 277 aa13.5□□□□□ -0.25
Pcdha9-201ENSMUST00000115659 Tspan7Q62283 249 aa13.5□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 53.3 ms