Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Gm25239-201ENSMUST00000174915 86 ntBASIC40.19■■■■■ 4.02
Lbx1P52955 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.72■■■■□ 3.63
Lbx1P52955 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.06■■■■□ 3.52
Lbx1P52955 Gm24109-201ENSMUST00000175489 103 ntBASIC35.5■■■■□ 3.27
Lbx1P52955 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.27■■■■□ 3.08
Lbx1P52955 Gm15042-201ENSMUST00000120212 883 ntBASIC34.04■■■■□ 3.04
Lbx1P52955 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34■■■■□ 3.03
Lbx1P52955 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.91■■■■□ 3.02
Lbx1P52955 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
Lbx1P52955 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.46■■■□□ 2.95
Lbx1P52955 Gm23366-201ENSMUST00000175022 89 ntBASIC33.44■■■□□ 2.94
Lbx1P52955 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
Lbx1P52955 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33.23■■■□□ 2.91
Lbx1P52955 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
Lbx1P52955 Gm15045-201ENSMUST00000117359 883 ntBASIC33.04■■■□□ 2.88
Lbx1P52955 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.9■■■□□ 2.86
Lbx1P52955 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Lbx1P52955 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.23■■■□□ 2.75
Lbx1P52955 Gm25238-201ENSMUST00000174914 89 ntBASIC32.07■■■□□ 2.72
Lbx1P52955 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Lbx1P52955 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Lbx1P52955 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.67■■■□□ 2.66
Lbx1P52955 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31.5■■■□□ 2.63
Lbx1P52955 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Lbx1P52955 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.35■■■□□ 2.61
Lbx1P52955 Gm25262-201ENSMUST00000174934 133 ntBASIC31.33■■■□□ 2.61
Lbx1P52955 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
Lbx1P52955 Gm26115-201ENSMUST00000175605 87 ntBASIC31.03■■■□□ 2.56
Lbx1P52955 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.96■■■□□ 2.55
Lbx1P52955 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.91■■■□□ 2.54
Lbx1P52955 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.83■■■□□ 2.53
Lbx1P52955 Gm8109-201ENSMUST00000194076 746 ntBASIC30.71■■■□□ 2.51
Lbx1P52955 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Lbx1P52955 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
Lbx1P52955 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.55■■■□□ 2.48
Lbx1P52955 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Lbx1P52955 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.34■■■□□ 2.45
Lbx1P52955 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC30.17■■■□□ 2.42
Lbx1P52955 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Lbx1P52955 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Lbx1P52955 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
Lbx1P52955 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.9■■■□□ 2.38
Lbx1P52955 Rab21-202ENSMUST00000218831 843 ntBASIC29.81■■■□□ 2.36
Lbx1P52955 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
Lbx1P52955 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Lbx1P52955 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Lbx1P52955 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Lbx1P52955 Gm27325-201ENSMUST00000175467 74 ntBASIC29.59■■■□□ 2.33
Lbx1P52955 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29.59■■■□□ 2.33
Lbx1P52955 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Lbx1P52955 Gm24804-201ENSMUST00000174982 85 ntBASIC29.52■■■□□ 2.32
Lbx1P52955 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Lbx1P52955 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.41■■■□□ 2.3
Lbx1P52955 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC29.34■■■□□ 2.29
Lbx1P52955 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Lbx1P52955 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.3■■■□□ 2.28
Lbx1P52955 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC29.25■■■□□ 2.27
Lbx1P52955 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
Lbx1P52955 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Lbx1P52955 Zfp131-205ENSMUST00000223812 663 ntBASIC29.16■■■□□ 2.26
Lbx1P52955 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.15■■■□□ 2.26
Lbx1P52955 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Lbx1P52955 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Lbx1P52955 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC29.05■■■□□ 2.24
Lbx1P52955 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC29.03■■■□□ 2.24
Lbx1P52955 Gm17082-201ENSMUST00000166043 1091 ntBASIC29.03■■■□□ 2.24
Lbx1P52955 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.03■■■□□ 2.24
Lbx1P52955 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC29■■■□□ 2.23
Lbx1P52955 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC28.94■■■□□ 2.22
Lbx1P52955 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
Lbx1P52955 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Lbx1P52955 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.9■■■□□ 2.22
Lbx1P52955 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Lbx1P52955 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
Lbx1P52955 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Lbx1P52955 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC28.76■■■□□ 2.19
Lbx1P52955 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
Lbx1P52955 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.72■■■□□ 2.19
Lbx1P52955 Gm27322-201ENSMUST00000184007 104 ntBASIC28.7■■■□□ 2.18
Lbx1P52955 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Lbx1P52955 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Lbx1P52955 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Lbx1P52955 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC28.65■■■□□ 2.18
Lbx1P52955 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Lbx1P52955 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.61■■■□□ 2.17
Lbx1P52955 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Lbx1P52955 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC28.53■■■□□ 2.16
Lbx1P52955 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Lbx1P52955 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Lbx1P52955 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Lbx1P52955 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Lbx1P52955 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
Lbx1P52955 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.46■■■□□ 2.15
Lbx1P52955 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC28.45■■■□□ 2.14
Lbx1P52955 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC28.43■■■□□ 2.14
Lbx1P52955 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC28.39■■■□□ 2.14
Lbx1P52955 Gm5987-201ENSMUST00000196433 1151 ntBASIC28.31■■■□□ 2.12
Lbx1P52955 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.29■■■□□ 2.12
Lbx1P52955 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Lbx1P52955 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC28.24■■■□□ 2.11
Retrieved 100 of 76,532 protein–RNA pairs in 98.2 ms