RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 FAM169BQ8N8A8 192 aa8.53□□□□□ -1.04
PRPF4B-206ENST00000481109 UCN2Q96RP3 112 aa8.53□□□□□ -1.04
PRPF4B-206ENST00000481109 FOXQ1Q9C009 403 aa8.53□□□□□ -1.04
PRPF4B-206ENST00000481109 TMEM160Q9NX00 188 aa8.53□□□□□ -1.04
PRPF4B-206ENST00000481109 RNF186Q9NXI6 227 aa8.53□□□□□ -1.04
PRPF4B-206ENST00000481109 C19orf25Q9UFG5 118 aaPredicted RBP8.53□□□□□ -1.04
PRPF4B-206ENST00000481109 COL4A2P08572 1712 aa8.52□□□□□ -1.05
PRPF4B-206ENST00000481109 ZNF816-ZNF321PA0A0X1KG74 233 aa8.52□□□□□ -1.05
PRPF4B-206ENST00000481109 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.52□□□□□ -1.05
PRPF4B-206ENST00000481109 PRR19A6NJB7 356 aa8.52□□□□□ -1.05
PRPF4B-206ENST00000481109 SH2D7A6NKC9 451 aaPredicted RBP8.52□□□□□ -1.05
PRPF4B-206ENST00000481109 C17orf51A8MQB3 221 aa8.52□□□□□ -1.05
PRPF4B-206ENST00000481109 C4orf51C9J302 202 aa8.52□□□□□ -1.05
PRPF4B-206ENST00000481109 NKX2-2O95096 273 aa8.52□□□□□ -1.05
PRPF4B-206ENST00000481109 NXPH3O95157 252 aa8.52□□□□□ -1.05
PRPF4B-206ENST00000481109 TNFAIP6P98066 277 aaPredicted RBP8.52□□□□□ -1.05
PRPF4B-206ENST00000481109 COL9A2Q14055 689 aaPredicted RBP8.52□□□□□ -1.05
PRPF4B-206ENST00000481109 SPRNQ5BIV9 151 aa8.52□□□□□ -1.05
PRPF4B-206ENST00000481109 Q6P435 159 aa8.52□□□□□ -1.05
PRPF4B-206ENST00000481109 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.52□□□□□ -1.05
PRPF4B-206ENST00000481109 NUP35Q8NFH5 326 aa8.52□□□□□ -1.05
PRPF4B-206ENST00000481109 OR51H1Q8NH63 302 aa8.52□□□□□ -1.05
PRPF4B-206ENST00000481109 FAM131CQ96AQ9 280 aa8.52□□□□□ -1.05
PRPF4B-206ENST00000481109 LINC00479Q96M42 142 aa8.52□□□□□ -1.05
PRPF4B-206ENST00000481109 KIR2DL4Q99706 377 aa8.52□□□□□ -1.05
PRPF4B-206ENST00000481109 RASL11BQ9BPW5 248 aa8.52□□□□□ -1.05
PRPF4B-206ENST00000481109 YTHDF2Q9Y5A9 579 aaKnown RBP8.52□□□□□ -1.05
PRPF4B-206ENST00000481109 TNFSF11O14788 317 aa8.51□□□□□ -1.05
PRPF4B-206ENST00000481109 C8orf88P0DMB2 117 aa8.51□□□□□ -1.05
PRPF4B-206ENST00000481109 ZNF823P16415 610 aa8.51□□□□□ -1.05
PRPF4B-206ENST00000481109 GCSHP23434 173 aa8.51□□□□□ -1.05
PRPF4B-206ENST00000481109 SMCPP49901 116 aaPredicted RBP8.51□□□□□ -1.05
PRPF4B-206ENST00000481109 KISS1Q15726 138 aa8.51□□□□□ -1.05
PRPF4B-206ENST00000481109 OR1L8Q8NGR8 309 aa8.51□□□□□ -1.05
PRPF4B-206ENST00000481109 HSD17B10Q99714 261 aaKnown RBP8.51□□□□□ -1.05
PRPF4B-206ENST00000481109 PRADC1Q9BSG0 188 aa8.51□□□□□ -1.05
PRPF4B-206ENST00000481109 FGF22Q9HCT0 170 aa8.51□□□□□ -1.05
PRPF4B-206ENST00000481109 A0A1W2PPV9 198 aa8.51□□□□□ -1.05
PRPF4B-206ENST00000481109 IGHG1P01857 330 aa8.51□□□□□ -1.05
PRPF4B-206ENST00000481109 CTLA4P16410 223 aa8.51□□□□□ -1.05
PRPF4B-206ENST00000481109 COL9A1P20849 921 aa8.51□□□□□ -1.05
PRPF4B-206ENST00000481109 DAP3P51398 398 aaKnown RBP8.51□□□□□ -1.05
PRPF4B-206ENST00000481109 RRN3P1Q2M238 152 aa8.51□□□□□ -1.05
PRPF4B-206ENST00000481109 LGALS9BQ3B8N2 356 aa8.51□□□□□ -1.05
PRPF4B-206ENST00000481109 LGALS9CQ6DKI2 356 aa8.51□□□□□ -1.05
PRPF4B-206ENST00000481109 CRIP3Q6Q6R5 217 aa8.51□□□□□ -1.05
PRPF4B-206ENST00000481109 TMEM219Q86XT9 240 aa8.51□□□□□ -1.05
PRPF4B-206ENST00000481109 SCAMP4Q969E2 229 aa8.51□□□□□ -1.05
PRPF4B-206ENST00000481109 AJUBAQ96IF1 538 aa8.51□□□□□ -1.05
PRPF4B-206ENST00000481109 CARD19Q96LW7 228 aa8.51□□□□□ -1.05
PRPF4B-206ENST00000481109 PHF3Q92576 2039 aaKnown RBP8.51□□□□□ -1.05
PRPF4B-206ENST00000481109 CACNA1CQ13936 2221 aa8.51□□□□□ -1.05
PRPF4B-206ENST00000481109 A0A0G2JRQ6 117 aa8.5□□□□□ -1.05
PRPF4B-206ENST00000481109 TCRBV4S1A1TA0A5B7 111 aa8.5□□□□□ -1.05
PRPF4B-206ENST00000481109 NPFFO15130 113 aa8.5□□□□□ -1.05
PRPF4B-206ENST00000481109 IGHMP01871 453 aa8.5□□□□□ -1.05
PRPF4B-206ENST00000481109 CISD3P0C7P0 127 aa8.5□□□□□ -1.05
PRPF4B-206ENST00000481109 TAL2Q16559 108 aa8.5□□□□□ -1.05
PRPF4B-206ENST00000481109 UTF1Q5T230 341 aa8.5□□□□□ -1.05
PRPF4B-206ENST00000481109 GDF5OSQ5U4N7 250 aa8.5□□□□□ -1.05
PRPF4B-206ENST00000481109 CFHR4Q92496 578 aa8.5□□□□□ -1.05
PRPF4B-206ENST00000481109 PIGCQ92535 297 aa8.5□□□□□ -1.05
PRPF4B-206ENST00000481109 FBXL15Q9H469 300 aa8.5□□□□□ -1.05
PRPF4B-206ENST00000481109 IAPPP10997 89 aa8.5□□□□□ -1.05
PRPF4B-206ENST00000481109 CD27P26842 260 aa8.5□□□□□ -1.05
PRPF4B-206ENST00000481109 DSCR4P56555 118 aaPredicted RBP8.5□□□□□ -1.05
PRPF4B-206ENST00000481109 RPS18P62269 152 aaKnown RBP8.5□□□□□ -1.05
PRPF4B-206ENST00000481109 RHBDD2Q6NTF9 364 aa8.5□□□□□ -1.05
PRPF4B-206ENST00000481109 PQLC2Q6ZP29 291 aa8.5□□□□□ -1.05
PRPF4B-206ENST00000481109 ZNF747Q9BV97 191 aa8.5□□□□□ -1.05
PRPF4B-206ENST00000481109 KLF16Q9BXK1 252 aaPredicted RBP8.5□□□□□ -1.05
PRPF4B-206ENST00000481109 KLF12Q9Y4X4 402 aa8.5□□□□□ -1.05
PRPF4B-206ENST00000481109 SCN3AQ9NY46 2000 aa8.5□□□□□ -1.05
PRPF4B-206ENST00000481109 IGKV1-9A0A0C4DH69 117 aa8.49□□□□□ -1.05
PRPF4B-206ENST00000481109 LOC107984640A0A0U1RRK4 108 aa8.49□□□□□ -1.05
PRPF4B-206ENST00000481109 CXorf51AA0A1B0GTR3 108 aa8.49□□□□□ -1.05
PRPF4B-206ENST00000481109 K7ERJ3 54 aa8.49□□□□□ -1.05
PRPF4B-206ENST00000481109 DNPH1O43598 174 aa8.49□□□□□ -1.05
PRPF4B-206ENST00000481109 BNIP3LO60238 219 aa8.49□□□□□ -1.05
PRPF4B-206ENST00000481109 PRKNO60260 465 aaPredicted RBP8.49□□□□□ -1.05
PRPF4B-206ENST00000481109 P04436 131 aa8.49□□□□□ -1.05
PRPF4B-206ENST00000481109 CENPWQ5EE01 88 aa8.49□□□□□ -1.05
PRPF4B-206ENST00000481109 TREML4Q6UXN2 200 aa8.49□□□□□ -1.05
PRPF4B-206ENST00000481109 CEND1Q8N111 149 aa8.49□□□□□ -1.05
PRPF4B-206ENST00000481109 DUX3Q96PT4 197 aa8.49□□□□□ -1.05
PRPF4B-206ENST00000481109 SPANXDQ9BXN6 97 aa8.49□□□□□ -1.05
PRPF4B-206ENST00000481109 A0A1B0GXF2 115 aa8.49□□□□□ -1.05
PRPF4B-206ENST00000481109 CSN1S1P47710 185 aa8.49□□□□□ -1.05
PRPF4B-206ENST00000481109 MFAP2P55001 183 aa8.49□□□□□ -1.05
PRPF4B-206ENST00000481109 NCOA6Q14686 2063 aaPredicted RBP8.49□□□□□ -1.05
PRPF4B-206ENST00000481109 SPANXN5Q5MJ07 72 aa8.49□□□□□ -1.05
PRPF4B-206ENST00000481109 AMTNQ6UX39 209 aa8.49□□□□□ -1.05
PRPF4B-206ENST00000481109 ZNF818PQ6ZRF7 136 aa8.49□□□□□ -1.05
PRPF4B-206ENST00000481109 SBSPONQ8IVN8 264 aa8.49□□□□□ -1.05
PRPF4B-206ENST00000481109 ATG2BQ96BY7 2078 aa8.49□□□□□ -1.05
PRPF4B-206ENST00000481109 TM4SF19Q96DZ7 209 aa8.49□□□□□ -1.05
PRPF4B-206ENST00000481109 RNASE7Q9H1E1 156 aaKnown RBP8.49□□□□□ -1.05
PRPF4B-206ENST00000481109 C5orf42Q9H799 3197 aa8.49□□□□□ -1.05
PRPF4B-206ENST00000481109 NHP2Q9NX24 153 aaKnown RBP8.49□□□□□ -1.05
PRPF4B-206ENST00000481109 TDRD6O60522 2096 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms