RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Mob4Q6PEB6 225 aa9.64□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Olfr1357Q7TQU7 313 aa9.64□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Olfr876Q7TRE4 310 aa9.64□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Sec22aQ8BH47 307 aa9.64□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 A830031A19RikQ8BNT5 113 aa9.64□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Smim4Q8C1Q6 80 aa9.64□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Olfr113Q8VEU4 312 aa9.64□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Olfr472Q8VG43 310 aa9.64□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Eaf1Q9D4C5 268 aa9.64□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Tex101Q9JMI7 250 aa9.64□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Bcl3Q9Z2F6 448 aa9.64□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Trav23A0A0G2JG17 115 aa9.63□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Olfr102B2RT33 308 aa9.63□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Gm8281L7N235 204 aa9.63□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 PrkacaP05132 351 aaKnown RBP9.63□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Rpl5P47962 297 aaKnown RBP9.63□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Srp9P49962 86 aa9.63□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Ppp1ccP63087 323 aa9.63□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Gm5150Q1AN92 299 aa9.63□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Zfp7Q3TFZ4 685 aa9.63□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 MidnQ3TPJ7 465 aa9.63□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Clec4a1Q80UI7 245 aa9.63□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Slc16a12Q8BGC3 486 aa9.63□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 A730061H03RikQ8BGD2 154 aa9.63□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Cept1Q8BGS7 416 aa9.63□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Cacul1Q8R0X2 377 aa9.63□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Nabp2Q8R2Y9 212 aa9.63□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Olfr518Q8VEW1 333 aa9.63□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Olfr1370Q8VFG4 316 aa9.63□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Olfr1448Q8VFX1 314 aa9.63□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Ifitm3Q9CQW9 137 aa9.63□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Q9CWB7 115 aa9.63□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Hcfc1r1Q9CYQ5 120 aa9.63□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Tinf2Q9QXG9 341 aa9.63□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Slc35a2Q9R0M8 390 aa9.63□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Notch3Q61982 2318 aa9.63□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Trbv23A0A0A6YWQ1 115 aa9.62□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 FggyA2AJL3 552 aa9.62□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Rhox2fA2ANE0 191 aa9.62□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Arxes1C0HK79 180 aa9.62□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Arxes2C0HK80 180 aa9.62□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Gm9972E9Q053 102 aa9.62□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Gm16506F7ANP4 213 aa9.62□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 G530012D18RikJ3QK25 139 aa9.62□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Lin7cO88952 197 aaKnown RBP9.62□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Myod1P10085 318 aa9.62□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Mfge8P21956 463 aaKnown RBP9.62□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Adrb3P25962 400 aa9.62□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 PtgirP43252 415 aa9.62□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Sult4a1P63046 284 aa9.62□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Plk3Q60806 631 aa9.62□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 AdoQ6PDY2 256 aa9.62□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Scgb2b24Q7M747 112 aa9.62□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Olfr1283Q7TQY4 305 aa9.62□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Olfr1031Q7TR87 336 aa9.62□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Olfr559Q8VH14 318 aa9.62□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 St3gal6Q8VIB3 329 aa9.62□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 QprtQ91X91 299 aa9.62□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 GmfbQ9CQI3 142 aa9.62□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Ap1s2Q9DB50 160 aa9.62□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 GabarapQ9DCD6 117 aa9.62□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Sectm1bQ9JL59 212 aa9.62□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Trav5-4A0A075B652 114 aa9.61□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Ighv1-47A0A0A6YY41 117 aa9.61□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Olfr1150-ps1A0A1L1STL1 316 aa9.61□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Spink14B9EJP9 96 aa9.61□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Olfr1511E9PWU0 318 aa9.61□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Gm3512L7N206 146 aa9.61□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 BC117090L7N257 96 aa9.61□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Ascl4M0QW46 144 aa9.61□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Ptpn20O55082 426 aa9.61□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Amy1P00687 511 aa9.61□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Ccl2P10148 148 aa9.61□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 DcnP28654 354 aa9.61□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Nat2P50295 290 aa9.61□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Stx4P70452 298 aa9.61□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Zfp772Q3UQL6 416 aa9.61□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Gm5464Q3UY29 175 aa9.61□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Slc38a8Q5HZH7 432 aa9.61□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Olfr147Q60886 317 aa9.61□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Ifna15Q61718 190 aa9.61□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Lrrc75aQ7TSF4 339 aa9.61□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Fam212bQ80VY2 300 aa9.61□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Ankrd33Q8BXP5 385 aa9.61□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 CdnfQ8CC36 187 aa9.61□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 GhitmQ91VC9 346 aa9.61□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Mrpl28Q9D1B9 257 aa9.61□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Btbd17Q9DB72 478 aa9.61□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Rcl1Q9JJT0 373 aaKnown RBP9.61□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Muc6Q80T03 2850 aa9.6□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Rpl7a-ps5A0A140T8L3 268 aa9.6□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 4930467E23RikD3Z1P8 350 aa9.6□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Gm15319E9Q637 350 aa9.6□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Vmn1r129E9QA94 307 aa9.6□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Gm21732J3QM79 361 aa9.6□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Btbd35f30J3QML3 498 aa9.6□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Gm16434J3QN10 205 aa9.6□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Btbd35f22J3QN64 498 aa9.6□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 Gm8720K9J7F4 307 aa9.6□□□□□ -0.87
Ccdc28a-202ENSMUST00000080860 4930555G01RikL7N253 205 aa9.6□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 55.9 ms