Protein–RNA interactions for Protein: Q8BGD2

A730061H03Rik, RIKEN cDNA A730061H03 gene (Fragment), mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A730061H03RikQ8BGD2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
A730061H03RikQ8BGD2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.31■■■□□ 2.44
A730061H03RikQ8BGD2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
A730061H03RikQ8BGD2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
A730061H03RikQ8BGD2 Psd-208ENSMUST00000224556 2034 ntBASIC29.71■■■□□ 2.35
A730061H03RikQ8BGD2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
A730061H03RikQ8BGD2 Gm25239-201ENSMUST00000174915 86 ntBASIC29.01■■■□□ 2.23
A730061H03RikQ8BGD2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
A730061H03RikQ8BGD2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
A730061H03RikQ8BGD2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
A730061H03RikQ8BGD2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
A730061H03RikQ8BGD2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
A730061H03RikQ8BGD2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
A730061H03RikQ8BGD2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
A730061H03RikQ8BGD2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
A730061H03RikQ8BGD2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
A730061H03RikQ8BGD2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
A730061H03RikQ8BGD2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
A730061H03RikQ8BGD2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27.31■■□□□ 1.96
A730061H03RikQ8BGD2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
A730061H03RikQ8BGD2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
A730061H03RikQ8BGD2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
A730061H03RikQ8BGD2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
A730061H03RikQ8BGD2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
A730061H03RikQ8BGD2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
A730061H03RikQ8BGD2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.9■■□□□ 1.9
A730061H03RikQ8BGD2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
A730061H03RikQ8BGD2 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.86■■□□□ 1.89
A730061H03RikQ8BGD2 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
A730061H03RikQ8BGD2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.83■■□□□ 1.89
A730061H03RikQ8BGD2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.86
A730061H03RikQ8BGD2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
A730061H03RikQ8BGD2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
A730061H03RikQ8BGD2 Gm15042-201ENSMUST00000120212 883 ntBASIC26.52■■□□□ 1.84
A730061H03RikQ8BGD2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
A730061H03RikQ8BGD2 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
A730061H03RikQ8BGD2 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.44■■□□□ 1.82
A730061H03RikQ8BGD2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
A730061H03RikQ8BGD2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.37■■□□□ 1.81
A730061H03RikQ8BGD2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26.34■■□□□ 1.81
A730061H03RikQ8BGD2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
A730061H03RikQ8BGD2 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
A730061H03RikQ8BGD2 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
A730061H03RikQ8BGD2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
A730061H03RikQ8BGD2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
A730061H03RikQ8BGD2 Gm15045-201ENSMUST00000117359 883 ntBASIC26.19■■□□□ 1.78
A730061H03RikQ8BGD2 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.18■■□□□ 1.78
A730061H03RikQ8BGD2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
A730061H03RikQ8BGD2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
A730061H03RikQ8BGD2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
A730061H03RikQ8BGD2 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
A730061H03RikQ8BGD2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
A730061H03RikQ8BGD2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.9■■□□□ 1.74
A730061H03RikQ8BGD2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
A730061H03RikQ8BGD2 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
A730061H03RikQ8BGD2 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
A730061H03RikQ8BGD2 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
A730061H03RikQ8BGD2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
A730061H03RikQ8BGD2 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
A730061H03RikQ8BGD2 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
A730061H03RikQ8BGD2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
A730061H03RikQ8BGD2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
A730061H03RikQ8BGD2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
A730061H03RikQ8BGD2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.69
A730061H03RikQ8BGD2 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
A730061H03RikQ8BGD2 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
A730061H03RikQ8BGD2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
A730061H03RikQ8BGD2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
A730061H03RikQ8BGD2 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
A730061H03RikQ8BGD2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.46■■□□□ 1.67
A730061H03RikQ8BGD2 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
A730061H03RikQ8BGD2 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
A730061H03RikQ8BGD2 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.39■■□□□ 1.66
A730061H03RikQ8BGD2 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
A730061H03RikQ8BGD2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
A730061H03RikQ8BGD2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC25.25■■□□□ 1.63
A730061H03RikQ8BGD2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
A730061H03RikQ8BGD2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
A730061H03RikQ8BGD2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
A730061H03RikQ8BGD2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
A730061H03RikQ8BGD2 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
A730061H03RikQ8BGD2 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
A730061H03RikQ8BGD2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.16■■□□□ 1.62
A730061H03RikQ8BGD2 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
A730061H03RikQ8BGD2 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
A730061H03RikQ8BGD2 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
A730061H03RikQ8BGD2 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
A730061H03RikQ8BGD2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
A730061H03RikQ8BGD2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
A730061H03RikQ8BGD2 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
A730061H03RikQ8BGD2 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
A730061H03RikQ8BGD2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
A730061H03RikQ8BGD2 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24.89■■□□□ 1.57
A730061H03RikQ8BGD2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
A730061H03RikQ8BGD2 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
A730061H03RikQ8BGD2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
A730061H03RikQ8BGD2 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
A730061H03RikQ8BGD2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
A730061H03RikQ8BGD2 Gm24109-201ENSMUST00000175489 103 ntBASIC24.65■■□□□ 1.54
A730061H03RikQ8BGD2 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Retrieved 100 of 76,532 protein–RNA pairs in 9.8 ms