Protein–RNA interactions for Protein: Q8BH47

Sec22a, Vesicle-trafficking protein SEC22a, mousemouse

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec22aQ8BH47 Gm25239-201ENSMUST00000174915 86 ntBASIC29.35■■■□□ 2.29
Sec22aQ8BH47 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Sec22aQ8BH47 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC27.97■■■□□ 2.07
Sec22aQ8BH47 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Sec22aQ8BH47 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Sec22aQ8BH47 Psd-208ENSMUST00000224556 2034 ntBASIC27.37■■□□□ 1.97
Sec22aQ8BH47 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Sec22aQ8BH47 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Sec22aQ8BH47 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Sec22aQ8BH47 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Sec22aQ8BH47 Gm15042-201ENSMUST00000120212 883 ntBASIC26.3■■□□□ 1.8
Sec22aQ8BH47 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Sec22aQ8BH47 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Sec22aQ8BH47 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Sec22aQ8BH47 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Sec22aQ8BH47 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Sec22aQ8BH47 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.73
Sec22aQ8BH47 Gm15045-201ENSMUST00000117359 883 ntBASIC25.86■■□□□ 1.73
Sec22aQ8BH47 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25.85■■□□□ 1.73
Sec22aQ8BH47 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Sec22aQ8BH47 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Sec22aQ8BH47 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
Sec22aQ8BH47 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Sec22aQ8BH47 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Sec22aQ8BH47 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Sec22aQ8BH47 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Sec22aQ8BH47 Gm24109-201ENSMUST00000175489 103 ntBASIC25.16■■□□□ 1.62
Sec22aQ8BH47 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Sec22aQ8BH47 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Sec22aQ8BH47 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
Sec22aQ8BH47 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.11■■□□□ 1.61
Sec22aQ8BH47 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
Sec22aQ8BH47 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Sec22aQ8BH47 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Sec22aQ8BH47 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Sec22aQ8BH47 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Sec22aQ8BH47 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24.93■■□□□ 1.58
Sec22aQ8BH47 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Sec22aQ8BH47 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24.83■■□□□ 1.56
Sec22aQ8BH47 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24.82■■□□□ 1.56
Sec22aQ8BH47 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Sec22aQ8BH47 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Sec22aQ8BH47 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Sec22aQ8BH47 Gm42596-201ENSMUST00000196305 1958 ntBASIC24.7■■□□□ 1.54
Sec22aQ8BH47 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Sec22aQ8BH47 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Sec22aQ8BH47 Gm23366-201ENSMUST00000175022 89 ntBASIC24.6■■□□□ 1.53
Sec22aQ8BH47 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Sec22aQ8BH47 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.49■■□□□ 1.51
Sec22aQ8BH47 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Sec22aQ8BH47 Gm10524-201ENSMUST00000181931 1893 ntBASIC24.47■■□□□ 1.51
Sec22aQ8BH47 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Sec22aQ8BH47 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Sec22aQ8BH47 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Sec22aQ8BH47 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Sec22aQ8BH47 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Sec22aQ8BH47 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Sec22aQ8BH47 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
Sec22aQ8BH47 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Sec22aQ8BH47 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.15■■□□□ 1.46
Sec22aQ8BH47 AC153911.1-202ENSMUST00000218534 1034 ntBASIC24.15■■□□□ 1.46
Sec22aQ8BH47 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
Sec22aQ8BH47 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Sec22aQ8BH47 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Sec22aQ8BH47 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Sec22aQ8BH47 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Sec22aQ8BH47 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Sec22aQ8BH47 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Sec22aQ8BH47 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23.84■■□□□ 1.41
Sec22aQ8BH47 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Sec22aQ8BH47 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Sec22aQ8BH47 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Sec22aQ8BH47 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Sec22aQ8BH47 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Sec22aQ8BH47 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Sec22aQ8BH47 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Sec22aQ8BH47 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Sec22aQ8BH47 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.67■■□□□ 1.38
Sec22aQ8BH47 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Sec22aQ8BH47 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Sec22aQ8BH47 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23.58■■□□□ 1.36
Sec22aQ8BH47 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Sec22aQ8BH47 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Sec22aQ8BH47 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23.53■■□□□ 1.36
Sec22aQ8BH47 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Sec22aQ8BH47 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
Sec22aQ8BH47 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
Sec22aQ8BH47 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
Sec22aQ8BH47 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Sec22aQ8BH47 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Sec22aQ8BH47 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.36■■□□□ 1.33
Sec22aQ8BH47 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.34■■□□□ 1.33
Sec22aQ8BH47 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Sec22aQ8BH47 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Sec22aQ8BH47 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Sec22aQ8BH47 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23.3■■□□□ 1.32
Sec22aQ8BH47 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sec22aQ8BH47 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sec22aQ8BH47 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sec22aQ8BH47 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms