Protein–RNA interactions for Protein: L7N257

BC117090, cDNA sequence BC1179090, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC117090L7N257 Gm25239-201ENSMUST00000174915 86 ntBASIC29.79■■■□□ 2.36
BC117090L7N257 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
BC117090L7N257 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.04
BC117090L7N257 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
BC117090L7N257 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
BC117090L7N257 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
BC117090L7N257 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
BC117090L7N257 Psd-208ENSMUST00000224556 2034 ntBASIC27.12■■□□□ 1.93
BC117090L7N257 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
BC117090L7N257 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
BC117090L7N257 Gm15042-201ENSMUST00000120212 883 ntBASIC26.22■■□□□ 1.79
BC117090L7N257 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
BC117090L7N257 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
BC117090L7N257 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
BC117090L7N257 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
BC117090L7N257 Gm24109-201ENSMUST00000175489 103 ntBASIC25.69■■□□□ 1.7
BC117090L7N257 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
BC117090L7N257 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
BC117090L7N257 Gm15045-201ENSMUST00000117359 883 ntBASIC25.56■■□□□ 1.68
BC117090L7N257 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
BC117090L7N257 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
BC117090L7N257 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
BC117090L7N257 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25.32■■□□□ 1.64
BC117090L7N257 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
BC117090L7N257 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
BC117090L7N257 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
BC117090L7N257 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
BC117090L7N257 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
BC117090L7N257 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
BC117090L7N257 Gm23366-201ENSMUST00000175022 89 ntBASIC24.99■■□□□ 1.59
BC117090L7N257 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
BC117090L7N257 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
BC117090L7N257 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
BC117090L7N257 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
BC117090L7N257 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
BC117090L7N257 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC24.64■■□□□ 1.53
BC117090L7N257 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24.6■■□□□ 1.53
BC117090L7N257 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
BC117090L7N257 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
BC117090L7N257 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
BC117090L7N257 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
BC117090L7N257 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
BC117090L7N257 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24.41■■□□□ 1.5
BC117090L7N257 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24.4■■□□□ 1.5
BC117090L7N257 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
BC117090L7N257 Gm42596-201ENSMUST00000196305 1958 ntBASIC24.36■■□□□ 1.49
BC117090L7N257 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
BC117090L7N257 Gm10524-201ENSMUST00000181931 1893 ntBASIC24.32■■□□□ 1.48
BC117090L7N257 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
BC117090L7N257 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
BC117090L7N257 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
BC117090L7N257 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
BC117090L7N257 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.2■■□□□ 1.47
BC117090L7N257 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
BC117090L7N257 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
BC117090L7N257 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
BC117090L7N257 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
BC117090L7N257 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
BC117090L7N257 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
BC117090L7N257 AC153911.1-202ENSMUST00000218534 1034 ntBASIC24.04■■□□□ 1.44
BC117090L7N257 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
BC117090L7N257 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
BC117090L7N257 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
BC117090L7N257 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23.95■■□□□ 1.43
BC117090L7N257 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
BC117090L7N257 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.85■■□□□ 1.41
BC117090L7N257 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
BC117090L7N257 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC23.75■■□□□ 1.39
BC117090L7N257 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
BC117090L7N257 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC23.72■■□□□ 1.39
BC117090L7N257 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
BC117090L7N257 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
BC117090L7N257 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
BC117090L7N257 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
BC117090L7N257 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
BC117090L7N257 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC23.56■■□□□ 1.36
BC117090L7N257 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
BC117090L7N257 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23.55■■□□□ 1.36
BC117090L7N257 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
BC117090L7N257 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
BC117090L7N257 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
BC117090L7N257 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
BC117090L7N257 Gm25238-201ENSMUST00000174914 89 ntBASIC23.41■■□□□ 1.34
BC117090L7N257 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
BC117090L7N257 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
BC117090L7N257 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.39■■□□□ 1.34
BC117090L7N257 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
BC117090L7N257 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
BC117090L7N257 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
BC117090L7N257 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
BC117090L7N257 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
BC117090L7N257 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
BC117090L7N257 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
BC117090L7N257 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
BC117090L7N257 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
BC117090L7N257 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
BC117090L7N257 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
BC117090L7N257 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
BC117090L7N257 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
BC117090L7N257 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms