RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 SRMP19623 302 aa4.94□□□□□ -1.62
VCAN-207ENST00000507162 RPL30P62888 115 aaKnown RBP4.94□□□□□ -1.62
VCAN-207ENST00000507162 MRPL28Q13084 256 aaKnown RBP4.94□□□□□ -1.62
VCAN-207ENST00000507162 RCN1Q15293 331 aa4.94□□□□□ -1.62
VCAN-207ENST00000507162 RRN3P1Q2M238 152 aa4.94□□□□□ -1.62
VCAN-207ENST00000507162 TOMM20LQ6UXN7 152 aa4.94□□□□□ -1.62
VCAN-207ENST00000507162 ARHGAP24Q8N264 748 aa4.94□□□□□ -1.62
VCAN-207ENST00000507162 GDPD1Q8N9F7 314 aa4.94□□□□□ -1.62
VCAN-207ENST00000507162 FCGR1BQ92637 280 aa4.94□□□□□ -1.62
VCAN-207ENST00000507162 LGALS12Q96DT0 336 aa4.94□□□□□ -1.62
VCAN-207ENST00000507162 Q96MT0 163 aa4.94□□□□□ -1.62
VCAN-207ENST00000507162 CMSS1Q9BQ75 279 aaKnown RBP4.94□□□□□ -1.62
VCAN-207ENST00000507162 GINS4Q9BRT9 223 aa4.94□□□□□ -1.62
VCAN-207ENST00000507162 TMEM59Q9BXS4 323 aa4.94□□□□□ -1.62
VCAN-207ENST00000507162 MRPL18Q9H0U6 180 aaKnown RBP4.94□□□□□ -1.62
VCAN-207ENST00000507162 GOLT1BQ9Y3E0 138 aa4.94□□□□□ -1.62
VCAN-207ENST00000507162 A0A1W2PS18 150 aa4.93□□□□□ -1.62
VCAN-207ENST00000507162 HELTA6NFD8 242 aa4.93□□□□□ -1.62
VCAN-207ENST00000507162 K7EIM0 57 aa4.93□□□□□ -1.62
VCAN-207ENST00000507162 SOCS1O15524 211 aa4.93□□□□□ -1.62
VCAN-207ENST00000507162 FABP7O15540 132 aa4.93□□□□□ -1.62
VCAN-207ENST00000507162 HRASP01112 189 aa4.93□□□□□ -1.62
VCAN-207ENST00000507162 IGHV3-48P01763 117 aa4.93□□□□□ -1.62
VCAN-207ENST00000507162 PRM2P04554 102 aa4.93□□□□□ -1.62
VCAN-207ENST00000507162 ATP5G1P05496 136 aa4.93□□□□□ -1.62
VCAN-207ENST00000507162 SERPINE2P07093 398 aa4.93□□□□□ -1.62
VCAN-207ENST00000507162 RAB6AP20340 208 aa4.93□□□□□ -1.62
VCAN-207ENST00000507162 NPPCP23582 126 aa4.93□□□□□ -1.62
VCAN-207ENST00000507162 ATP5G3P48201 142 aa4.93□□□□□ -1.62
VCAN-207ENST00000507162 ALDH3B2P48448 385 aa4.93□□□□□ -1.62
VCAN-207ENST00000507162 MFAP4P55083 255 aa4.93□□□□□ -1.62
VCAN-207ENST00000507162 OR5I1Q13606 314 aa4.93□□□□□ -1.62
VCAN-207ENST00000507162 TTC23Q5W5X9 447 aa4.93□□□□□ -1.62
VCAN-207ENST00000507162 XAF1Q6GPH4 301 aa4.93□□□□□ -1.62
VCAN-207ENST00000507162 RPL22L1Q6P5R6 122 aaKnown RBP4.93□□□□□ -1.62
VCAN-207ENST00000507162 KCTD9Q7L273 389 aa4.93□□□□□ -1.62
VCAN-207ENST00000507162 OR4A4PQ8NGN8 299 aa4.93□□□□□ -1.62
VCAN-207ENST00000507162 OR4S2Q8NH73 311 aa4.93□□□□□ -1.62
VCAN-207ENST00000507162 TCTEX1D2Q8WW35 142 aa4.93□□□□□ -1.62
VCAN-207ENST00000507162 SLC25A46Q96AG3 418 aa4.93□□□□□ -1.62
VCAN-207ENST00000507162 MOB3AQ96BX8 217 aa4.93□□□□□ -1.62
VCAN-207ENST00000507162 GNPNAT1Q96EK6 184 aaPredicted RBP4.93□□□□□ -1.62
VCAN-207ENST00000507162 NRBF2Q96F24 287 aa4.93□□□□□ -1.62
VCAN-207ENST00000507162 ATP6V0BQ99437 205 aa4.93□□□□□ -1.62
VCAN-207ENST00000507162 UPK3BQ9BT76 320 aa4.93□□□□□ -1.62
VCAN-207ENST00000507162 HINT2Q9BX68 163 aa4.93□□□□□ -1.62
VCAN-207ENST00000507162 COMMD5Q9GZQ3 224 aa4.93□□□□□ -1.62
VCAN-207ENST00000507162 NXF2Q9GZY0 626 aaKnown RBP4.93□□□□□ -1.62
VCAN-207ENST00000507162 CDIP1Q9H305 208 aa4.93□□□□□ -1.62
VCAN-207ENST00000507162 KCNK15Q9H427 330 aa4.93□□□□□ -1.62
VCAN-207ENST00000507162 TMEM231Q9H6L2 316 aa4.93□□□□□ -1.62
VCAN-207ENST00000507162 ERVK13-1Q9NX77 482 aa4.93□□□□□ -1.62
VCAN-207ENST00000507162 SPATA2Q9UM82 520 aa4.93□□□□□ -1.62
VCAN-207ENST00000507162 DNAH8Q96JB1 4490 aa4.93□□□□□ -1.62
VCAN-207ENST00000507162 A0A0A6YYD4 124 aa4.92□□□□□ -1.62
VCAN-207ENST00000507162 TRAV3A0A0B4J244 114 aa4.92□□□□□ -1.62
VCAN-207ENST00000507162 A0A0J9YY99 117 aa4.92□□□□□ -1.62
VCAN-207ENST00000507162 ZNF561-AS1K7EIQ3 104 aa4.92□□□□□ -1.62
VCAN-207ENST00000507162 ATP8B1O43520 1251 aa4.92□□□□□ -1.62
VCAN-207ENST00000507162 CD37P11049 281 aa4.92□□□□□ -1.62
VCAN-207ENST00000507162 CELP19835 753 aa4.92□□□□□ -1.62
VCAN-207ENST00000507162 TAS2R43P59537 309 aa4.92□□□□□ -1.62
VCAN-207ENST00000507162 YIF1BQ5BJH7 314 aa4.92□□□□□ -1.62
VCAN-207ENST00000507162 OGFRL1Q5TC84 451 aaPredicted RBP4.92□□□□□ -1.62
VCAN-207ENST00000507162 NFE4Q86UQ8 179 aa4.92□□□□□ -1.62
VCAN-207ENST00000507162 CDH26Q8IXH8 852 aa4.92□□□□□ -1.62
VCAN-207ENST00000507162 DCANP1Q8TF63 244 aa4.92□□□□□ -1.62
VCAN-207ENST00000507162 GLMPQ8WWB7 406 aa4.92□□□□□ -1.62
VCAN-207ENST00000507162 MAFIPQ8WZ33 124 aa4.92□□□□□ -1.62
VCAN-207ENST00000507162 CCDC124Q96CT7 223 aaKnown RBP4.92□□□□□ -1.62
VCAN-207ENST00000507162 TMEM208Q9BTX3 173 aa4.92□□□□□ -1.62
VCAN-207ENST00000507162 QTRT1Q9BXR0 403 aaKnown RBP4.92□□□□□ -1.62
VCAN-207ENST00000507162 C12orf4Q9NQ89 552 aa4.92□□□□□ -1.62
VCAN-207ENST00000507162 MRPS16Q9Y3D3 137 aaKnown RBP4.92□□□□□ -1.62
VCAN-207ENST00000507162 TRAV26-1A0A087WT03 109 aa4.91□□□□□ -1.62
VCAN-207ENST00000507162 TRBV6-7A0A0A0MS04 114 aa4.91□□□□□ -1.62
VCAN-207ENST00000507162 TRBV5-5A0A0J9YX44 114 aa4.91□□□□□ -1.62
VCAN-207ENST00000507162 LYRM9A8MSI8 78 aa4.91□□□□□ -1.62
VCAN-207ENST00000507162 ZNF705GA8MUZ8 300 aaPredicted RBP4.91□□□□□ -1.62
VCAN-207ENST00000507162 G3V2T6 193 aa4.91□□□□□ -1.62
VCAN-207ENST00000507162 M0QYG6 137 aa4.91□□□□□ -1.62
VCAN-207ENST00000507162 GNG7O60262 68 aa4.91□□□□□ -1.62
VCAN-207ENST00000507162 FKBP6O75344 327 aa4.91□□□□□ -1.62
VCAN-207ENST00000507162 UBBP0CG47 229 aa4.91□□□□□ -1.62
VCAN-207ENST00000507162 TRAPPC2P0DI81 140 aa4.91□□□□□ -1.62
VCAN-207ENST00000507162 TRAPPC2BP0DI82 140 aa4.91□□□□□ -1.62
VCAN-207ENST00000507162 DCKP27707 260 aa4.91□□□□□ -1.62
VCAN-207ENST00000507162 P2RY1P47900 373 aa4.91□□□□□ -1.62
VCAN-207ENST00000507162 DEFB1P60022 68 aa4.91□□□□□ -1.62
VCAN-207ENST00000507162 SNRPD3P62318 126 aaKnown RBP4.91□□□□□ -1.62
VCAN-207ENST00000507162 MRPS15P82914 257 aaKnown RBP4.91□□□□□ -1.62
VCAN-207ENST00000507162 WT1-ASQ06250 92 aa4.91□□□□□ -1.62
VCAN-207ENST00000507162 Q499Y3 187 aa4.91□□□□□ -1.62
VCAN-207ENST00000507162 HSP90B2PQ58FF3 399 aa4.91□□□□□ -1.62
VCAN-207ENST00000507162 ZNF773Q6PK81 442 aa4.91□□□□□ -1.62
VCAN-207ENST00000507162 C1orf158Q8N1D5 194 aa4.91□□□□□ -1.62
VCAN-207ENST00000507162 ZBTB34Q8NCN2 500 aa4.91□□□□□ -1.62
VCAN-207ENST00000507162 OR4B1Q8NGF8 309 aa4.91□□□□□ -1.62
VCAN-207ENST00000507162 MISP3Q96FF7 219 aa4.91□□□□□ -1.62
VCAN-207ENST00000507162 UQCC2Q9BRT2 126 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms