RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 IGHV1-69P01742 117 aa7.53□□□□□ -1.2
SF3B1-211ENST00000487698 PRH1P02810 166 aa7.53□□□□□ -1.2
SF3B1-211ENST00000487698 SNCAP37840 140 aa7.53□□□□□ -1.2
SF3B1-211ENST00000487698 RPL27AP46776 148 aaKnown RBP7.53□□□□□ -1.2
SF3B1-211ENST00000487698 ERHP84090 104 aaKnown RBP7.53□□□□□ -1.2
SF3B1-211ENST00000487698 LOXL1Q08397 574 aaPredicted RBP7.53□□□□□ -1.2
SF3B1-211ENST00000487698 TOR2AQ5JU69 321 aa7.53□□□□□ -1.2
SF3B1-211ENST00000487698 PVRIGQ6DKI7 326 aa7.53□□□□□ -1.2
SF3B1-211ENST00000487698 TREML4Q6UXN2 200 aa7.53□□□□□ -1.2
SF3B1-211ENST00000487698 IL34Q6ZMJ4 242 aa7.53□□□□□ -1.2
SF3B1-211ENST00000487698 ZNF114Q8NC26 417 aa7.53□□□□□ -1.2
SF3B1-211ENST00000487698 MARC2Q969Z3 335 aa7.53□□□□□ -1.2
SF3B1-211ENST00000487698 HRH4Q9H3N8 390 aa7.53□□□□□ -1.2
SF3B1-211ENST00000487698 LSM4Q9Y4Z0 139 aaKnown RBP7.53□□□□□ -1.2
SF3B1-211ENST00000487698 ABCA1O95477 2261 aa7.53□□□□□ -1.2
SF3B1-211ENST00000487698 TRAV20A0A0B4J274 112 aa7.52□□□□□ -1.2
SF3B1-211ENST00000487698 TRAV40A0A0B4J280 105 aa7.52□□□□□ -1.2
SF3B1-211ENST00000487698 TEX22C9J3V5 150 aa7.52□□□□□ -1.2
SF3B1-211ENST00000487698 FCN1O00602 326 aa7.52□□□□□ -1.2
SF3B1-211ENST00000487698 MPDU1O75352 247 aa7.52□□□□□ -1.2
SF3B1-211ENST00000487698 ACTL6BO94805 426 aa7.52□□□□□ -1.2
SF3B1-211ENST00000487698 OR13C7P0DN81 318 aa7.52□□□□□ -1.2
SF3B1-211ENST00000487698 GATA3P23771 443 aa7.52□□□□□ -1.2
SF3B1-211ENST00000487698 ZNF616Q08AN1 781 aa7.52□□□□□ -1.2
SF3B1-211ENST00000487698 HNF4GQ14541 408 aa7.52□□□□□ -1.2
SF3B1-211ENST00000487698 C5orf64Q2M2E5 130 aa7.52□□□□□ -1.2
SF3B1-211ENST00000487698 AKR1C8PQ5T2L2 129 aa7.52□□□□□ -1.2
SF3B1-211ENST00000487698 KRTAP1-3Q8IUG1 177 aa7.52□□□□□ -1.2
SF3B1-211ENST00000487698 FAM213BQ8TBF2 198 aa7.52□□□□□ -1.2
SF3B1-211ENST00000487698 PRRC2AP48634 2157 aaKnown RBP7.52□□□□□ -1.21
SF3B1-211ENST00000487698 ZANQ9Y493 2812 aa7.52□□□□□ -1.21
SF3B1-211ENST00000487698 UNC79Q9P2D8 2635 aa7.52□□□□□ -1.21
SF3B1-211ENST00000487698 I3L521 148 aa7.52□□□□□ -1.21
SF3B1-211ENST00000487698 HES1Q14469 280 aa7.52□□□□□ -1.21
SF3B1-211ENST00000487698 Q5PR19 223 aa7.52□□□□□ -1.21
SF3B1-211ENST00000487698 RUSC1-AS1Q66K80 236 aa7.52□□□□□ -1.21
SF3B1-211ENST00000487698 HIST2H2BCQ6DN03 193 aa7.52□□□□□ -1.21
SF3B1-211ENST00000487698 ACSM6Q6P461 480 aa7.52□□□□□ -1.21
SF3B1-211ENST00000487698 UQCC3Q6UW78 93 aa7.52□□□□□ -1.21
SF3B1-211ENST00000487698 LINC01356Q8N9X3 169 aa7.52□□□□□ -1.21
SF3B1-211ENST00000487698 SRSF12Q8WXF0 261 aaKnown RBP7.52□□□□□ -1.21
SF3B1-211ENST00000487698 P2RX4Q99571 388 aa7.52□□□□□ -1.21
SF3B1-211ENST00000487698 VSIRQ9H7M9 311 aa7.52□□□□□ -1.21
SF3B1-211ENST00000487698 RPRMQ9NS64 109 aa7.52□□□□□ -1.21
SF3B1-211ENST00000487698 HIF1ANQ9NWT6 349 aa7.52□□□□□ -1.21
SF3B1-211ENST00000487698 KIAA1456Q9P272 454 aa7.52□□□□□ -1.21
SF3B1-211ENST00000487698 IGHV4-38-2P0DP08 117 aa7.51□□□□□ -1.21
SF3B1-211ENST00000487698 AREGP15514 252 aa7.51□□□□□ -1.21
SF3B1-211ENST00000487698 TMEM11P17152 192 aa7.51□□□□□ -1.21
SF3B1-211ENST00000487698 BRS3P32247 399 aa7.51□□□□□ -1.21
SF3B1-211ENST00000487698 GNB1P62873 340 aa7.51□□□□□ -1.21
SF3B1-211ENST00000487698 PLGLAQ15195 96 aa7.51□□□□□ -1.21
SF3B1-211ENST00000487698 TMEM41BQ5BJD5 291 aa7.51□□□□□ -1.21
SF3B1-211ENST00000487698 FAM120AOSQ5T036 256 aa7.51□□□□□ -1.21
SF3B1-211ENST00000487698 PRSS57Q6UWY2 283 aa7.51□□□□□ -1.21
SF3B1-211ENST00000487698 MRPL41Q8IXM3 137 aaKnown RBP7.51□□□□□ -1.21
SF3B1-211ENST00000487698 MGST2Q99735 147 aa7.51□□□□□ -1.21
SF3B1-211ENST00000487698 SRSF8Q9BRL6 282 aaKnown RBP7.51□□□□□ -1.21
SF3B1-211ENST00000487698 C7orf69Q9H7B7 122 aa7.51□□□□□ -1.21
SF3B1-211ENST00000487698 CSPG4Q6UVK1 2322 aa7.51□□□□□ -1.21
SF3B1-211ENST00000487698 SMCO3A2RU48 225 aa7.51□□□□□ -1.21
SF3B1-211ENST00000487698 C17orf112F2Z3M2 114 aa7.51□□□□□ -1.21
SF3B1-211ENST00000487698 FAM106CPP0CH98 169 aa7.51□□□□□ -1.21
SF3B1-211ENST00000487698 CD69Q07108 199 aa7.51□□□□□ -1.21
SF3B1-211ENST00000487698 ZNF726P1Q15940 193 aa7.51□□□□□ -1.21
SF3B1-211ENST00000487698 SPSB3Q6PJ21 355 aa7.51□□□□□ -1.21
SF3B1-211ENST00000487698 COMMD1Q8N668 190 aa7.51□□□□□ -1.21
SF3B1-211ENST00000487698 RNASEH2CQ8TDP1 164 aaKnown RBP7.51□□□□□ -1.21
SF3B1-211ENST00000487698 GGTLC1Q9BX51 225 aa7.51□□□□□ -1.21
SF3B1-211ENST00000487698 NPVFQ9HCQ7 196 aa7.51□□□□□ -1.21
SF3B1-211ENST00000487698 ITPR3Q14573 2671 aa7.5□□□□□ -1.21
SF3B1-211ENST00000487698 CELSR1Q9NYQ6 3014 aa7.5□□□□□ -1.21
SF3B1-211ENST00000487698 IGHV3OR16-10A0A075B7F0 116 aa7.5□□□□□ -1.21
SF3B1-211ENST00000487698 TRAV1-1A0A0B4J248 108 aa7.5□□□□□ -1.21
SF3B1-211ENST00000487698 RNF223E7ERA6 249 aa7.5□□□□□ -1.21
SF3B1-211ENST00000487698 SOX15O60248 233 aa7.5□□□□□ -1.21
SF3B1-211ENST00000487698 TSPAN15O95858 294 aa7.5□□□□□ -1.21
SF3B1-211ENST00000487698 AVPP01185 164 aa7.5□□□□□ -1.21
SF3B1-211ENST00000487698 REG1AP05451 166 aa7.5□□□□□ -1.21
SF3B1-211ENST00000487698 GPX4P36969 197 aaPredicted RBP7.5□□□□□ -1.21
SF3B1-211ENST00000487698 OPRK1P41145 380 aa7.5□□□□□ -1.21
SF3B1-211ENST00000487698 SUB1P53999 127 aaKnown RBP eCLIP7.5□□□□□ -1.21
SF3B1-211ENST00000487698 MFAP2P55001 183 aa7.5□□□□□ -1.21
SF3B1-211ENST00000487698 ELLP55199 621 aaPredicted RBP7.5□□□□□ -1.21
SF3B1-211ENST00000487698 RAB2AP61019 212 aa7.5□□□□□ -1.21
SF3B1-211ENST00000487698 SRSF3P84103 164 aaKnown RBP7.5□□□□□ -1.21
SF3B1-211ENST00000487698 GAMTQ14353 236 aa7.5□□□□□ -1.21
SF3B1-211ENST00000487698 KLF17Q5JT82 389 aaPredicted RBP7.5□□□□□ -1.21
SF3B1-211ENST00000487698 TEPPQ6URK8 271 aa7.5□□□□□ -1.21
SF3B1-211ENST00000487698 BRD3OSQ6XYD6 125 aa7.5□□□□□ -1.21
SF3B1-211ENST00000487698 CACNG8Q8WXS5 425 aa7.5□□□□□ -1.21
SF3B1-211ENST00000487698 RCC1LQ96I51 464 aaKnown RBP7.5□□□□□ -1.21
SF3B1-211ENST00000487698 SCRT1Q9BWW7 348 aa7.5□□□□□ -1.21
SF3B1-211ENST00000487698 FNDC4Q9H6D8 234 aaPredicted RBP7.5□□□□□ -1.21
SF3B1-211ENST00000487698 PDZD2O15018 2839 aa7.5□□□□□ -1.21
SF3B1-211ENST00000487698 IGKV1OR2-108A0A075B7D4 117 aa7.49□□□□□ -1.21
SF3B1-211ENST00000487698 A0A0U1RQK1 487 aa7.49□□□□□ -1.21
SF3B1-211ENST00000487698 H2AFB1P0C5Y9 115 aa7.49□□□□□ -1.21
SF3B1-211ENST00000487698 ZP3P21754 424 aa7.49□□□□□ -1.21
SF3B1-211ENST00000487698 AKR1C1Q04828 323 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms