RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Olfr194L7N1Y8 306 aa9.4□□□□□ -0.9
Msh3-201ENSMUST00000022220 Olfr203L7N205 307 aa9.4□□□□□ -0.9
Msh3-201ENSMUST00000022220 CideaO70302 217 aa9.4□□□□□ -0.9
Msh3-201ENSMUST00000022220 Dpagt1P42867 410 aa9.4□□□□□ -0.9
Msh3-201ENSMUST00000022220 Ccr8P56484 353 aa9.4□□□□□ -0.9
Msh3-201ENSMUST00000022220 Rnd3P61588 244 aa9.4□□□□□ -0.9
Msh3-201ENSMUST00000022220 NmsQ5H8A1 153 aa9.4□□□□□ -0.9
Msh3-201ENSMUST00000022220 Gm5771Q792Y9 245 aa9.4□□□□□ -0.9
Msh3-201ENSMUST00000022220 Pitpnc1Q8K4R4 332 aa9.4□□□□□ -0.9
Msh3-201ENSMUST00000022220 Eny2Q9JIX0 101 aaKnown RBP9.4□□□□□ -0.9
Msh3-201ENSMUST00000022220 Cspg4Q8VHY0 2327 aa9.4□□□□□ -0.9
Msh3-201ENSMUST00000022220 Scgb1b12A0A087WP21 93 aa9.4□□□□□ -0.91
Msh3-201ENSMUST00000022220 Mettl8A2AUU0 281 aa9.4□□□□□ -0.91
Msh3-201ENSMUST00000022220 Gm43517E9PYS1 339 aa9.4□□□□□ -0.91
Msh3-201ENSMUST00000022220 Smr2O09133 150 aa9.4□□□□□ -0.91
Msh3-201ENSMUST00000022220 Agr2O88312 175 aa9.4□□□□□ -0.91
Msh3-201ENSMUST00000022220 H2-Ab1P01921 265 aa9.4□□□□□ -0.91
Msh3-201ENSMUST00000022220 Cryba1P02525 198 aa9.4□□□□□ -0.91
Msh3-201ENSMUST00000022220 P06344 263 aa9.4□□□□□ -0.91
Msh3-201ENSMUST00000022220 Gabra6P16305 453 aa9.4□□□□□ -0.91
Msh3-201ENSMUST00000022220 S100a3P62818 101 aa9.4□□□□□ -0.91
Msh3-201ENSMUST00000022220 Mesp1P97309 243 aa9.4□□□□□ -0.91
Msh3-201ENSMUST00000022220 Olfr141Q60880 325 aa9.4□□□□□ -0.91
Msh3-201ENSMUST00000022220 Olfr1386Q7TQT0 309 aa9.4□□□□□ -0.91
Msh3-201ENSMUST00000022220 Coro2aQ8C0P5 524 aa9.4□□□□□ -0.91
Msh3-201ENSMUST00000022220 Gm9837Q8C607 126 aa9.4□□□□□ -0.91
Msh3-201ENSMUST00000022220 Reg4Q9D8G5 157 aa9.4□□□□□ -0.91
Msh3-201ENSMUST00000022220 Fbxl17Q9QZN1 701 aa9.4□□□□□ -0.91
Msh3-201ENSMUST00000022220 Pkd1l2Q7TN88 2461 aa9.4□□□□□ -0.91
Msh3-201ENSMUST00000022220 Vmn1r194J3JS27 296 aa9.39□□□□□ -0.91
Msh3-201ENSMUST00000022220 P01638 115 aa9.39□□□□□ -0.91
Msh3-201ENSMUST00000022220 Igsf11P0C673 428 aa9.39□□□□□ -0.91
Msh3-201ENSMUST00000022220 Trp53rkaQ5U452 244 aa9.39□□□□□ -0.91
Msh3-201ENSMUST00000022220 Ceacam10Q61400 265 aa9.39□□□□□ -0.91
Msh3-201ENSMUST00000022220 Tbpl2Q6SJ95 350 aa9.39□□□□□ -0.91
Msh3-201ENSMUST00000022220 Olfr890Q7TRD9 314 aa9.39□□□□□ -0.91
Msh3-201ENSMUST00000022220 Olfr504Q7TRU7 318 aa9.39□□□□□ -0.91
Msh3-201ENSMUST00000022220 Vash1Q8C1W1 375 aa9.39□□□□□ -0.91
Msh3-201ENSMUST00000022220 Cmc2Q8K199 79 aa9.39□□□□□ -0.91
Msh3-201ENSMUST00000022220 Olfr1394Q8VET2 312 aa9.39□□□□□ -0.91
Msh3-201ENSMUST00000022220 S1pr5Q91X56 400 aa9.39□□□□□ -0.91
Msh3-201ENSMUST00000022220 Tp53rkQ99PW4 244 aa9.39□□□□□ -0.91
Msh3-201ENSMUST00000022220 Tmbim7Q9D592 302 aa9.39□□□□□ -0.91
Msh3-201ENSMUST00000022220 Tmem54Q9D7S1 219 aa9.39□□□□□ -0.91
Msh3-201ENSMUST00000022220 1700025F22RikQ9D9Y7 111 aa9.39□□□□□ -0.91
Msh3-201ENSMUST00000022220 Zfp334A2A4U6 679 aa9.39□□□□□ -0.91
Msh3-201ENSMUST00000022220 Gm5239D3YYZ2 122 aa9.39□□□□□ -0.91
Msh3-201ENSMUST00000022220 1700003H04RikE9PXM2 192 aa9.39□□□□□ -0.91
Msh3-201ENSMUST00000022220 Gm14288E9Q9W0 88 aa9.39□□□□□ -0.91
Msh3-201ENSMUST00000022220 RbpjP31266 526 aa9.39□□□□□ -0.91
Msh3-201ENSMUST00000022220 Fgf8P37237 268 aa9.39□□□□□ -0.91
Msh3-201ENSMUST00000022220 Vax1Q2NKI2 338 aa9.39□□□□□ -0.91
Msh3-201ENSMUST00000022220 Lrrc30Q3UV48 300 aa9.39□□□□□ -0.91
Msh3-201ENSMUST00000022220 LiphQ8CIV3 451 aa9.39□□□□□ -0.91
Msh3-201ENSMUST00000022220 Degs2Q8R2F2 323 aa9.39□□□□□ -0.91
Msh3-201ENSMUST00000022220 Rnps1Q99M28 305 aaKnown RBP9.39□□□□□ -0.91
Msh3-201ENSMUST00000022220 Rpp14Q9CQH8 122 aa9.39□□□□□ -0.91
Msh3-201ENSMUST00000022220 Sgms2Q9D4B1 365 aa9.39□□□□□ -0.91
Msh3-201ENSMUST00000022220 Cldn14Q9Z0S3 239 aa9.39□□□□□ -0.91
Msh3-201ENSMUST00000022220 Med12lQ8BQM9 2157 aa9.39□□□□□ -0.91
Msh3-201ENSMUST00000022220 Fut9O88819 359 aa9.39□□□□□ -0.91
Msh3-201ENSMUST00000022220 Sftpa1P35242 248 aa9.39□□□□□ -0.91
Msh3-201ENSMUST00000022220 Zfp7Q3TFZ4 685 aa9.39□□□□□ -0.91
Msh3-201ENSMUST00000022220 Paqr8Q80ZE5 354 aa9.39□□□□□ -0.91
Msh3-201ENSMUST00000022220 Lhfpl2Q8BGA2 222 aa9.39□□□□□ -0.91
Msh3-201ENSMUST00000022220 Vmn1r178Q8R2B6 304 aa9.39□□□□□ -0.91
Msh3-201ENSMUST00000022220 MrgprdQ91ZB8 321 aa9.39□□□□□ -0.91
Msh3-201ENSMUST00000022220 Osr2Q91ZD1 312 aa9.39□□□□□ -0.91
Msh3-201ENSMUST00000022220 Prss28Q924N9 274 aa9.39□□□□□ -0.91
Msh3-201ENSMUST00000022220 Spsb1Q9D5L7 273 aa9.39□□□□□ -0.91
Msh3-201ENSMUST00000022220 Olfr573-ps1A0A1B0GRU2 297 aa9.38□□□□□ -0.91
Msh3-201ENSMUST00000022220 Kdf1A2A9F4 397 aa9.38□□□□□ -0.91
Msh3-201ENSMUST00000022220 Casp16-psI6L890 176 aa9.38□□□□□ -0.91
Msh3-201ENSMUST00000022220 SdcbpO08992 299 aa9.38□□□□□ -0.91
Msh3-201ENSMUST00000022220 Q504N7 393 aa9.38□□□□□ -0.91
Msh3-201ENSMUST00000022220 Olfr1290Q7TQX8 312 aa9.38□□□□□ -0.91
Msh3-201ENSMUST00000022220 Upk3bQ80YF6 275 aa9.38□□□□□ -0.91
Msh3-201ENSMUST00000022220 Hist3h2bbQ8CGP0 126 aa9.38□□□□□ -0.91
Msh3-201ENSMUST00000022220 Olfr736Q8VFT6 312 aa9.38□□□□□ -0.91
Msh3-201ENSMUST00000022220 Ppp1r27Q9D119 154 aa9.38□□□□□ -0.91
Msh3-201ENSMUST00000022220 Hist3h2baQ9D2U9 126 aa9.38□□□□□ -0.91
Msh3-201ENSMUST00000022220 Tex101Q9JMI7 250 aa9.38□□□□□ -0.91
Msh3-201ENSMUST00000022220 Angpt4Q9WVH6 509 aa9.38□□□□□ -0.91
Msh3-201ENSMUST00000022220 MylkQ6PDN3 1941 aaKnown RBP9.38□□□□□ -0.91
Msh3-201ENSMUST00000022220 Olfr556E9Q549 324 aa9.38□□□□□ -0.91
Msh3-201ENSMUST00000022220 Tnfrsf1aP25118 454 aa9.38□□□□□ -0.91
Msh3-201ENSMUST00000022220 CamlgP49070 294 aa9.38□□□□□ -0.91
Msh3-201ENSMUST00000022220 Olfr923Q7TRB9 317 aa9.38□□□□□ -0.91
Msh3-201ENSMUST00000022220 Olfr559Q8VH14 318 aa9.38□□□□□ -0.91
Msh3-201ENSMUST00000022220 Sf3b5Q923D4 86 aaKnown RBP9.38□□□□□ -0.91
Msh3-201ENSMUST00000022220 Mrpl3Q99N95 348 aa9.38□□□□□ -0.91
Msh3-201ENSMUST00000022220 Eaf1Q9D4C5 268 aa9.38□□□□□ -0.91
Msh3-201ENSMUST00000022220 Olfr934Q9EQ87 310 aa9.38□□□□□ -0.91
Msh3-201ENSMUST00000022220 Ighv5-12A0A075B5Q4 117 aa9.38□□□□□ -0.91
Msh3-201ENSMUST00000022220 Trbv5A0A0B4J1G9 113 aa9.38□□□□□ -0.91
Msh3-201ENSMUST00000022220 Ankrd65F6YK91 380 aa9.38□□□□□ -0.91
Msh3-201ENSMUST00000022220 Gm8677K9J7G9 307 aa9.38□□□□□ -0.91
Msh3-201ENSMUST00000022220 Gpr27O54897 379 aa9.38□□□□□ -0.91
Msh3-201ENSMUST00000022220 Gng3P63216 75 aa9.38□□□□□ -0.91
Msh3-201ENSMUST00000022220 IslrQ6GU68 428 aa9.38□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 25.2 ms