RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 GDPD1Q8N9F7 314 aa6.23□□□□□ -1.41
SMG1-216ENST00000569122 TCTEX1D2Q8WW35 142 aa6.23□□□□□ -1.41
SMG1-216ENST00000569122 SLC7A6OSQ96CW6 309 aaPredicted RBP6.23□□□□□ -1.41
SMG1-216ENST00000569122 OR10C1Q96KK4 312 aa6.23□□□□□ -1.41
SMG1-216ENST00000569122 TMEM231Q9H6L2 316 aa6.23□□□□□ -1.41
SMG1-216ENST00000569122 PLGRKTQ9HBL7 147 aa6.23□□□□□ -1.41
SMG1-216ENST00000569122 HRASLSQ9HDD0 168 aa6.23□□□□□ -1.41
SMG1-216ENST00000569122 RBMX2Q9Y388 322 aaKnown RBP6.23□□□□□ -1.41
SMG1-216ENST00000569122 X6R8D5 127 aa6.23□□□□□ -1.41
SMG1-216ENST00000569122 PNMA8CA0A1B0GUJ8 204 aa6.22□□□□□ -1.41
SMG1-216ENST00000569122 FOXI3A8MTJ6 420 aaPredicted RBP6.22□□□□□ -1.41
SMG1-216ENST00000569122 ATP8B1O43520 1251 aa6.22□□□□□ -1.41
SMG1-216ENST00000569122 CD37P11049 281 aa6.22□□□□□ -1.41
SMG1-216ENST00000569122 GADD45AP24522 165 aa6.22□□□□□ -1.41
SMG1-216ENST00000569122 RASSF2P50749 326 aa6.22□□□□□ -1.41
SMG1-216ENST00000569122 RPL11P62913 178 aaKnown RBP6.22□□□□□ -1.41
SMG1-216ENST00000569122 ACSM3Q53FZ2 586 aa6.22□□□□□ -1.41
SMG1-216ENST00000569122 Q56UQ5 140 aa6.22□□□□□ -1.41
SMG1-216ENST00000569122 OR2B11Q5JQS5 317 aa6.22□□□□□ -1.41
SMG1-216ENST00000569122 LEMD1Q68G75 181 aa6.22□□□□□ -1.41
SMG1-216ENST00000569122 ZNF66Q6ZN08 573 aa6.22□□□□□ -1.41
SMG1-216ENST00000569122 Q6ZS49 121 aa6.22□□□□□ -1.41
SMG1-216ENST00000569122 TCF24Q7RTU0 167 aa6.22□□□□□ -1.41
SMG1-216ENST00000569122 LRRTM1Q86UE6 522 aa6.22□□□□□ -1.41
SMG1-216ENST00000569122 UBAC2Q8NBM4 344 aa6.22□□□□□ -1.41
SMG1-216ENST00000569122 RAB3CQ96E17 227 aa6.22□□□□□ -1.41
SMG1-216ENST00000569122 QTRT1Q9BXR0 403 aaKnown RBP6.22□□□□□ -1.41
SMG1-216ENST00000569122 MS4A6AQ9H2W1 248 aa6.22□□□□□ -1.41
SMG1-216ENST00000569122 CLEC2DQ9UHP7 191 aa6.22□□□□□ -1.41
SMG1-216ENST00000569122 OR2W1Q9Y3N9 320 aa6.22□□□□□ -1.41
SMG1-216ENST00000569122 IGHV3OR16-8A0A075B7F1 116 aa6.21□□□□□ -1.42
SMG1-216ENST00000569122 IGLC7A0M8Q6 106 aa6.21□□□□□ -1.42
SMG1-216ENST00000569122 EFCAB10A6NFE3 127 aa6.21□□□□□ -1.42
SMG1-216ENST00000569122 RAB27BO00194 218 aa6.21□□□□□ -1.42
SMG1-216ENST00000569122 ST8SIA3O43173 380 aa6.21□□□□□ -1.42
SMG1-216ENST00000569122 HLA-DQB1P01920 261 aa6.21□□□□□ -1.42
SMG1-216ENST00000569122 SERPINE2P07093 398 aa6.21□□□□□ -1.42
SMG1-216ENST00000569122 GIG44P09565 113 aaPredicted RBP6.21□□□□□ -1.42
SMG1-216ENST00000569122 ARL6IP1Q15041 203 aa6.21□□□□□ -1.42
SMG1-216ENST00000569122 HSD17B12Q53GQ0 312 aa6.21□□□□□ -1.42
SMG1-216ENST00000569122 PLAC9Q5JTB6 97 aa6.21□□□□□ -1.42
SMG1-216ENST00000569122 TRPT1Q86TN4 253 aaKnown RBP6.21□□□□□ -1.42
SMG1-216ENST00000569122 MFSD4AQ8N468 514 aa6.21□□□□□ -1.42
SMG1-216ENST00000569122 CBR4Q8N4T8 237 aa6.21□□□□□ -1.42
SMG1-216ENST00000569122 ZNF485Q8NCK3 441 aa6.21□□□□□ -1.42
SMG1-216ENST00000569122 ZNF555Q8NEP9 628 aa6.21□□□□□ -1.42
SMG1-216ENST00000569122 SCARB1Q8WTV0 552 aa6.21□□□□□ -1.42
SMG1-216ENST00000569122 APH1BQ8WW43 257 aa6.21□□□□□ -1.42
SMG1-216ENST00000569122 GRAMD2BQ96HH9 432 aa6.21□□□□□ -1.42
SMG1-216ENST00000569122 TXN2Q99757 166 aa6.21□□□□□ -1.42
SMG1-216ENST00000569122 ATG101Q9BSB4 218 aa6.21□□□□□ -1.42
SMG1-216ENST00000569122 PTTG2Q9NZH5 202 aa6.21□□□□□ -1.42
SMG1-216ENST00000569122 RAB22AQ9UL26 194 aa6.21□□□□□ -1.42
SMG1-216ENST00000569122 CELA1Q9UNI1 258 aa6.21□□□□□ -1.42
SMG1-216ENST00000569122 A0A1W2PS18 150 aa6.2□□□□□ -1.42
SMG1-216ENST00000569122 SMIM9A6NGZ8 99 aa6.2□□□□□ -1.42
SMG1-216ENST00000569122 F8W735 103 aaPredicted RBP6.2□□□□□ -1.42
SMG1-216ENST00000569122 SLC17A2O00624 439 aa6.2□□□□□ -1.42
SMG1-216ENST00000569122 MYL12BO14950 172 aa6.2□□□□□ -1.42
SMG1-216ENST00000569122 RBFOX2O43251 390 aaKnown RBP eCLIP6.2□□□□□ -1.42
SMG1-216ENST00000569122 DENRO43583 198 aaKnown RBP6.2□□□□□ -1.42
SMG1-216ENST00000569122 CTSGP08311 255 aa6.2□□□□□ -1.42
SMG1-216ENST00000569122 TRAPPC2P0DI81 140 aa6.2□□□□□ -1.42
SMG1-216ENST00000569122 TRAPPC2BP0DI82 140 aa6.2□□□□□ -1.42
SMG1-216ENST00000569122 OR13C7P0DN81 318 aa6.2□□□□□ -1.42
SMG1-216ENST00000569122 NQO2P16083 231 aa6.2□□□□□ -1.42
SMG1-216ENST00000569122 FGF9P31371 208 aaPredicted RBP6.2□□□□□ -1.42
SMG1-216ENST00000569122 MFAP4P55083 255 aa6.2□□□□□ -1.42
SMG1-216ENST00000569122 WNT4P56705 351 aa6.2□□□□□ -1.42
SMG1-216ENST00000569122 TAS2R31P59538 309 aa6.2□□□□□ -1.42
SMG1-216ENST00000569122 RPL30P62888 115 aaKnown RBP6.2□□□□□ -1.42
SMG1-216ENST00000569122 RCN1Q15293 331 aa6.2□□□□□ -1.42
SMG1-216ENST00000569122 RAB11BQ15907 218 aa6.2□□□□□ -1.42
SMG1-216ENST00000569122 SMN1Q16637 294 aaKnown RBP6.2□□□□□ -1.42
SMG1-216ENST00000569122 TIMM50Q3ZCQ8 353 aa6.2□□□□□ -1.42
SMG1-216ENST00000569122 ZNF773Q6PK81 442 aa6.2□□□□□ -1.42
SMG1-216ENST00000569122 ZNF767PQ75MW2 155 aa6.2□□□□□ -1.42
SMG1-216ENST00000569122 SPATA12Q7Z6I5 190 aa6.2□□□□□ -1.42
SMG1-216ENST00000569122 C15orf53Q8NAA6 179 aa6.2□□□□□ -1.42
SMG1-216ENST00000569122 ZNF414Q96IQ9 312 aa6.2□□□□□ -1.42
SMG1-216ENST00000569122 C9orf16Q9BUW7 83 aa6.2□□□□□ -1.42
SMG1-216ENST00000569122 RABAC1Q9UI14 185 aa6.2□□□□□ -1.42
SMG1-216ENST00000569122 SPATA2Q9UM82 520 aa6.2□□□□□ -1.42
SMG1-216ENST00000569122 F11RQ9Y624 299 aaKnown RBP6.2□□□□□ -1.42
SMG1-216ENST00000569122 DNAH5Q8TE73 4624 aa6.2□□□□□ -1.42
SMG1-216ENST00000569122 APOBP04114 4563 aaKnown RBP6.19□□□□□ -1.42
SMG1-216ENST00000569122 NBDYA0A0U1RRE5 68 aa6.19□□□□□ -1.42
SMG1-216ENST00000569122 CGB1A6NKQ9 187 aa6.19□□□□□ -1.42
SMG1-216ENST00000569122 J3QRK9 145 aa6.19□□□□□ -1.42
SMG1-216ENST00000569122 UPK2O00526 184 aa6.19□□□□□ -1.42
SMG1-216ENST00000569122 WBP4O75554 376 aaKnown RBP6.19□□□□□ -1.42
SMG1-216ENST00000569122 CIB2O75838 187 aa6.19□□□□□ -1.42
SMG1-216ENST00000569122 HPRT1P00492 218 aa6.19□□□□□ -1.42
SMG1-216ENST00000569122 DTYMKP23919 212 aa6.19□□□□□ -1.42
SMG1-216ENST00000569122 EIF2B2P49770 351 aaKnown RBP6.19□□□□□ -1.42
SMG1-216ENST00000569122 ARPC4P59998 168 aa6.19□□□□□ -1.42
SMG1-216ENST00000569122 ST3GAL4Q11206 333 aa6.19□□□□□ -1.42
SMG1-216ENST00000569122 OXA1LQ15070 435 aa6.19□□□□□ -1.42
SMG1-216ENST00000569122 KCTD21Q4G0X4 260 aa6.19□□□□□ -1.42
SMG1-216ENST00000569122 UBE2UQ5VVX9 321 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms