RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 TMEM116Q8NCL8 245 aa8.79□□□□□ -1
SVIP-205ENST00000533774 VSTM2AQ8TAG5 236 aa8.79□□□□□ -1
SVIP-205ENST00000533774 PHYHIPQ92561 330 aa8.79□□□□□ -1
SVIP-205ENST00000533774 BSCL2Q96G97 398 aaPredicted RBP8.79□□□□□ -1
SVIP-205ENST00000533774 GINS4Q9BRT9 223 aa8.79□□□□□ -1
SVIP-205ENST00000533774 CLEC5AQ9NY25 188 aa8.79□□□□□ -1
SVIP-205ENST00000533774 RBMX2Q9Y388 322 aaKnown RBP8.79□□□□□ -1
SVIP-205ENST00000533774 C15orf62A8K5M9 175 aa8.78□□□□□ -1
SVIP-205ENST00000533774 CLDN12P56749 244 aa8.78□□□□□ -1
SVIP-205ENST00000533774 TAS2R43P59537 309 aa8.78□□□□□ -1
SVIP-205ENST00000533774 TRPT1Q86TN4 253 aaKnown RBP8.78□□□□□ -1
SVIP-205ENST00000533774 UBE2DNLQ8IWF7 75 aa8.78□□□□□ -1
SVIP-205ENST00000533774 CSNK1G2-AS1Q8NCQ2 148 aa8.78□□□□□ -1
SVIP-205ENST00000533774 OR4S2Q8NH73 311 aa8.78□□□□□ -1
SVIP-205ENST00000533774 GIMAP1Q8WWP7 306 aa8.78□□□□□ -1
SVIP-205ENST00000533774 MRPS7Q9Y2R9 242 aaKnown RBP8.78□□□□□ -1
SVIP-205ENST00000533774 PRELID3BQ9Y3B1 194 aa8.78□□□□□ -1
SVIP-205ENST00000533774 SLC17A2O00624 439 aa8.77□□□□□ -1.01
SVIP-205ENST00000533774 CTSGP08311 255 aa8.77□□□□□ -1.01
SVIP-205ENST00000533774 ST3GAL4Q11206 333 aa8.77□□□□□ -1.01
SVIP-205ENST00000533774 TIMM50Q3ZCQ8 353 aa8.77□□□□□ -1.01
SVIP-205ENST00000533774 SPSB3Q6PJ21 355 aa8.77□□□□□ -1.01
SVIP-205ENST00000533774 SCARB1Q8WTV0 552 aa8.77□□□□□ -1.01
SVIP-205ENST00000533774 TCTEX1D2Q8WW35 142 aa8.77□□□□□ -1.01
SVIP-205ENST00000533774 ELF5Q9UKW6 265 aaPredicted RBP8.77□□□□□ -1.01
SVIP-205ENST00000533774 UBR4Q5T4S7 5183 aa8.76□□□□□ -1.01
SVIP-205ENST00000533774 IRGMA1A4Y4 181 aa8.76□□□□□ -1.01
SVIP-205ENST00000533774 EFCAB10A6NFE3 127 aa8.76□□□□□ -1.01
SVIP-205ENST00000533774 K7EIM0 57 aa8.76□□□□□ -1.01
SVIP-205ENST00000533774 NUPL2O15504 423 aaKnown RBP8.76□□□□□ -1.01
SVIP-205ENST00000533774 IFNA21P01568 189 aa8.76□□□□□ -1.01
SVIP-205ENST00000533774 IFNA17P01571 189 aa8.76□□□□□ -1.01
SVIP-205ENST00000533774 HLA-DQB1P01920 261 aa8.76□□□□□ -1.01
SVIP-205ENST00000533774 APOHP02749 345 aaPredicted RBP8.76□□□□□ -1.01
SVIP-205ENST00000533774 GNB3P16520 340 aa8.76□□□□□ -1.01
SVIP-205ENST00000533774 NFYAP23511 347 aaPredicted RBP8.76□□□□□ -1.01
SVIP-205ENST00000533774 WT1-ASQ06250 92 aa8.76□□□□□ -1.01
SVIP-205ENST00000533774 SLC25A24Q6NUK1 477 aa8.76□□□□□ -1.01
SVIP-205ENST00000533774 TCF24Q7RTU0 167 aa8.76□□□□□ -1.01
SVIP-205ENST00000533774 OR56B1Q8NGI3 324 aa8.76□□□□□ -1.01
SVIP-205ENST00000533774 OR10C1Q96KK4 312 aa8.76□□□□□ -1.01
SVIP-205ENST00000533774 MS4A6AQ9H2W1 248 aa8.76□□□□□ -1.01
SVIP-205ENST00000533774 BET1LQ9NYM9 111 aa8.76□□□□□ -1.01
SVIP-205ENST00000533774 SPATA2Q9UM82 520 aa8.76□□□□□ -1.01
SVIP-205ENST00000533774 TMEM272A0A1B0GTI8 110 aa8.75□□□□□ -1.01
SVIP-205ENST00000533774 KNCNA6PVL3 124 aa8.75□□□□□ -1.01
SVIP-205ENST00000533774 MFNGO00587 321 aa8.75□□□□□ -1.01
SVIP-205ENST00000533774 UCHL1P09936 223 aa8.75□□□□□ -1.01
SVIP-205ENST00000533774 WNT4P56705 351 aa8.75□□□□□ -1.01
SVIP-205ENST00000533774 C2orf76Q3KRA6 126 aa8.75□□□□□ -1.01
SVIP-205ENST00000533774 HSD17B12Q53GQ0 312 aa8.75□□□□□ -1.01
SVIP-205ENST00000533774 CDPF1Q6NVV7 123 aa8.75□□□□□ -1.01
SVIP-205ENST00000533774 STHQ8IWL8 128 aa8.75□□□□□ -1.01
SVIP-205ENST00000533774 MFSD4AQ8N468 514 aa8.75□□□□□ -1.01
SVIP-205ENST00000533774 GDPD1Q8N9F7 314 aa8.75□□□□□ -1.01
SVIP-205ENST00000533774 UBAC2Q8NBM4 344 aa8.75□□□□□ -1.01
SVIP-205ENST00000533774 ST8SIA2Q92186 375 aa8.75□□□□□ -1.01
SVIP-205ENST00000533774 PLGRKTQ9HBL7 147 aa8.75□□□□□ -1.01
SVIP-205ENST00000533774 C21orf62Q9NYP8 219 aa8.75□□□□□ -1.01
SVIP-205ENST00000533774 TAS2R8Q9NYW2 309 aa8.75□□□□□ -1.01
SVIP-205ENST00000533774 THYN1Q9P016 225 aa8.75□□□□□ -1.01
SVIP-205ENST00000533774 TBC1D24Q9ULP9 559 aa8.75□□□□□ -1.01
SVIP-205ENST00000533774 AK6Q9Y3D8 172 aaKnown RBP8.75□□□□□ -1.01
SVIP-205ENST00000533774 OR2W1Q9Y3N9 320 aa8.75□□□□□ -1.01
SVIP-205ENST00000533774 A0A075B6Q4 140 aa8.74□□□□□ -1.01
SVIP-205ENST00000533774 UPK2O00526 184 aa8.74□□□□□ -1.01
SVIP-205ENST00000533774 ATP8B1O43520 1251 aa8.74□□□□□ -1.01
SVIP-205ENST00000533774 DENRO43583 198 aaKnown RBP8.74□□□□□ -1.01
SVIP-205ENST00000533774 DFFBO76075 338 aa8.74□□□□□ -1.01
SVIP-205ENST00000533774 SERPINE2P07093 398 aa8.74□□□□□ -1.01
SVIP-205ENST00000533774 H2AFB1P0C5Y9 115 aa8.74□□□□□ -1.01
SVIP-205ENST00000533774 H2AFB2P0C5Z0 115 aa8.74□□□□□ -1.01
SVIP-205ENST00000533774 INAFM2P0DMQ5 153 aa8.74□□□□□ -1.01
SVIP-205ENST00000533774 OR13C7P0DN81 318 aa8.74□□□□□ -1.01
SVIP-205ENST00000533774 RAB11BQ15907 218 aa8.74□□□□□ -1.01
SVIP-205ENST00000533774 RNF212Q495C1 297 aa8.74□□□□□ -1.01
SVIP-205ENST00000533774 LAIR2Q6ISS4 152 aa8.74□□□□□ -1.01
SVIP-205ENST00000533774 MORN3Q6PF18 240 aaPredicted RBP8.74□□□□□ -1.01
SVIP-205ENST00000533774 Q6ZS49 121 aa8.74□□□□□ -1.01
SVIP-205ENST00000533774 CENPSQ8N2Z9 138 aa8.74□□□□□ -1.01
SVIP-205ENST00000533774 NANOGP1Q8N7R0 232 aa8.74□□□□□ -1.01
SVIP-205ENST00000533774 FAM3DQ96BQ1 224 aa8.74□□□□□ -1.01
SVIP-205ENST00000533774 DGCR14Q96DF8 476 aaKnown RBP8.74□□□□□ -1.01
SVIP-205ENST00000533774 RAB3CQ96E17 227 aa8.74□□□□□ -1.01
SVIP-205ENST00000533774 HRASLSQ9HDD0 168 aa8.74□□□□□ -1.01
SVIP-205ENST00000533774 SRRM2Q9UQ35 2752 aaKnown RBP8.74□□□□□ -1.01
SVIP-205ENST00000533774 IGHV3-66A0A0C4DH42 116 aa8.73□□□□□ -1.01
SVIP-205ENST00000533774 HRASP01112 189 aa8.73□□□□□ -1.01
SVIP-205ENST00000533774 CD36P16671 472 aa8.73□□□□□ -1.01
SVIP-205ENST00000533774 RAB6AP20340 208 aa8.73□□□□□ -1.01
SVIP-205ENST00000533774 MRPS15P82914 257 aaKnown RBP8.73□□□□□ -1.01
SVIP-205ENST00000533774 Q56UQ5 140 aa8.73□□□□□ -1.01
SVIP-205ENST00000533774 ZNF773Q6PK81 442 aa8.73□□□□□ -1.01
SVIP-205ENST00000533774 ZNF367Q7RTV3 350 aa8.73□□□□□ -1.01
SVIP-205ENST00000533774 SPATA12Q7Z6I5 190 aa8.73□□□□□ -1.01
SVIP-205ENST00000533774 ATP6V0BQ99437 205 aa8.73□□□□□ -1.01
SVIP-205ENST00000533774 HSD17B10Q99714 261 aaKnown RBP8.73□□□□□ -1.01
SVIP-205ENST00000533774 C9orf16Q9BUW7 83 aa8.73□□□□□ -1.01
SVIP-205ENST00000533774 QTRT1Q9BXR0 403 aaKnown RBP8.73□□□□□ -1.01
SVIP-205ENST00000533774 VSIRQ9H7M9 311 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms