RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 OOSP1A8MZH6 123 aa20.55■□□□□ 0.88
CPNE1-205ENST00000401607 INS-IGF2F8WCM5 200 aa20.55■□□□□ 0.88
CPNE1-205ENST00000401607 MDKP21741 143 aaPredicted RBP20.55■□□□□ 0.88
CPNE1-205ENST00000401607 PRSS8Q16651 343 aa20.55■□□□□ 0.88
CPNE1-205ENST00000401607 BSXQ3C1V8 233 aa20.55■□□□□ 0.88
CPNE1-205ENST00000401607 LYPD6BQ8NI32 183 aa20.55■□□□□ 0.88
CPNE1-205ENST00000401607 MARC2Q969Z3 335 aa20.55■□□□□ 0.88
CPNE1-205ENST00000401607 TBL2Q9Y4P3 447 aaKnown RBP20.55■□□□□ 0.88
CPNE1-205ENST00000401607 FBN2P35556 2912 aa20.55■□□□□ 0.88
CPNE1-205ENST00000401607 ABCA2Q9BZC7 2435 aa20.55■□□□□ 0.88
CPNE1-205ENST00000401607 LGALS4P56470 323 aa20.54■□□□□ 0.88
CPNE1-205ENST00000401607 CLEC12BQ2HXU8 276 aa20.54■□□□□ 0.88
CPNE1-205ENST00000401607 METTL1Q9UBP6 276 aaKnown RBP20.54■□□□□ 0.88
CPNE1-205ENST00000401607 IFNA4P05014 189 aa20.54■□□□□ 0.88
CPNE1-205ENST00000401607 F2RL1P55085 397 aa20.54■□□□□ 0.88
CPNE1-205ENST00000401607 FBLN7Q53RD9 439 aa20.54■□□□□ 0.88
CPNE1-205ENST00000401607 CCDC144NLQ6NUI1 221 aa20.54■□□□□ 0.88
CPNE1-205ENST00000401607 MMD2Q8IY49 270 aa20.54■□□□□ 0.88
CPNE1-205ENST00000401607 FAM213BQ8TBF2 198 aa20.54■□□□□ 0.88
CPNE1-205ENST00000401607 AJUBAQ96IF1 538 aa20.54■□□□□ 0.88
CPNE1-205ENST00000401607 TACC2O95359 2948 aa20.53■□□□□ 0.88
CPNE1-205ENST00000401607 MED13LQ71F56 2210 aa20.53■□□□□ 0.88
CPNE1-205ENST00000401607 IGKV1D-33P01593 117 aa20.53■□□□□ 0.88
CPNE1-205ENST00000401607 IGKV1-33P01594 117 aa20.53■□□□□ 0.88
CPNE1-205ENST00000401607 ZNF616Q08AN1 781 aa20.53■□□□□ 0.88
CPNE1-205ENST00000401607 GGACTQ9BVM4 153 aa20.53■□□□□ 0.88
CPNE1-205ENST00000401607 RNASE2P10153 161 aaKnown RBP20.52■□□□□ 0.88
CPNE1-205ENST00000401607 FGF7P21781 194 aa20.52■□□□□ 0.88
CPNE1-205ENST00000401607 CD24P25063 80 aa20.52■□□□□ 0.88
CPNE1-205ENST00000401607 DLK1P80370 383 aa20.52■□□□□ 0.88
CPNE1-205ENST00000401607 AKR1C8PQ5T2L2 129 aa20.52■□□□□ 0.88
CPNE1-205ENST00000401607 CENPVQ7Z7K6 275 aaPredicted RBP20.52■□□□□ 0.88
CPNE1-205ENST00000401607 FBXL15Q9H469 300 aa20.52■□□□□ 0.88
CPNE1-205ENST00000401607 TIMM9Q9Y5J7 89 aa20.52■□□□□ 0.88
CPNE1-205ENST00000401607 CRYBG3Q68DQ2 2970 aa20.52■□□□□ 0.88
CPNE1-205ENST00000401607 A0A1W2PN81 502 aa20.51■□□□□ 0.87
CPNE1-205ENST00000401607 RAB19A4D1S5 217 aa20.51■□□□□ 0.87
CPNE1-205ENST00000401607 CHRNA7P36544 502 aa20.51■□□□□ 0.87
CPNE1-205ENST00000401607 WT1-ASQ06250 92 aa20.51■□□□□ 0.87
CPNE1-205ENST00000401607 TUSC1Q2TAM9 212 aa20.51■□□□□ 0.87
CPNE1-205ENST00000401607 C2orf83Q53S99 150 aa20.51■□□□□ 0.87
CPNE1-205ENST00000401607 IL34Q6ZMJ4 242 aa20.51■□□□□ 0.87
CPNE1-205ENST00000401607 PPP1R27Q86WC6 154 aa20.51■□□□□ 0.87
CPNE1-205ENST00000401607 EAF1Q96JC9 268 aaPredicted RBP20.51■□□□□ 0.87
CPNE1-205ENST00000401607 ASH1LQ9NR48 2969 aaKnown RBP20.51■□□□□ 0.87
CPNE1-205ENST00000401607 WDR83OSQ9Y284 106 aa20.51■□□□□ 0.87
CPNE1-205ENST00000401607 CHD6Q8TD26 2715 aa20.51■□□□□ 0.87
CPNE1-205ENST00000401607 NUDT19A8MXV4 375 aa20.51■□□□□ 0.87
CPNE1-205ENST00000401607 MOSP00540 346 aa20.51■□□□□ 0.87
CPNE1-205ENST00000401607 SLC25A16P16260 332 aa20.51■□□□□ 0.87
CPNE1-205ENST00000401607 HNF4GQ14541 408 aa20.51■□□□□ 0.87
CPNE1-205ENST00000401607 FAM210AQ96ND0 272 aa20.51■□□□□ 0.87
CPNE1-205ENST00000401607 SNRNP70P08621 437 aaKnown RBP20.5■□□□□ 0.87
CPNE1-205ENST00000401607 SAA4P35542 130 aa20.5■□□□□ 0.87
CPNE1-205ENST00000401607 ATP5IP56385 69 aaPredicted RBP20.5■□□□□ 0.87
CPNE1-205ENST00000401607 TNXAQ16473 311 aa20.5■□□□□ 0.87
CPNE1-205ENST00000401607 VSIRQ9H7M9 311 aa20.5■□□□□ 0.87
CPNE1-205ENST00000401607 CENPVL3A0A0U1RRI6 287 aa20.49■□□□□ 0.87
CPNE1-205ENST00000401607 MAS1LP35410 378 aa20.49■□□□□ 0.87
CPNE1-205ENST00000401607 SSBP2P81877 361 aaPredicted RBP20.49■□□□□ 0.87
CPNE1-205ENST00000401607 ERHP84090 104 aaKnown RBP20.49■□□□□ 0.87
CPNE1-205ENST00000401607 SERF2P84101 59 aa20.49■□□□□ 0.87
CPNE1-205ENST00000401607 MMDQ15546 238 aa20.49■□□□□ 0.87
CPNE1-205ENST00000401607 MALSU1Q96EH3 234 aa20.49■□□□□ 0.87
CPNE1-205ENST00000401607 NPCDR1Q9BY65 106 aa20.49■□□□□ 0.87
CPNE1-205ENST00000401607 SPG11Q96JI7 2443 aa20.49■□□□□ 0.87
CPNE1-205ENST00000401607 WNK2Q9Y3S1 2297 aa20.49■□□□□ 0.87
CPNE1-205ENST00000401607 A0A096LNT2 108 aa20.49■□□□□ 0.87
CPNE1-205ENST00000401607 RPL27AP46776 148 aaKnown RBP20.49■□□□□ 0.87
CPNE1-205ENST00000401607 COMPP49747 757 aaPredicted RBP20.49■□□□□ 0.87
CPNE1-205ENST00000401607 ARSJQ5FYB0 599 aaPredicted RBP20.49■□□□□ 0.87
CPNE1-205ENST00000401607 TREML4Q6UXN2 200 aa20.49■□□□□ 0.87
CPNE1-205ENST00000401607 NPBQ8NG41 125 aa20.49■□□□□ 0.87
CPNE1-205ENST00000401607 NPFFO15130 113 aa20.48■□□□□ 0.87
CPNE1-205ENST00000401607 NBR2O15453 112 aa20.48■□□□□ 0.87
CPNE1-205ENST00000401607 NDUFA3O95167 84 aa20.48■□□□□ 0.87
CPNE1-205ENST00000401607 MSMBP08118 114 aa20.48■□□□□ 0.87
CPNE1-205ENST00000401607 SNCAP37840 140 aa20.48■□□□□ 0.87
CPNE1-205ENST00000401607 DPPA3Q6W0C5 159 aa20.48■□□□□ 0.87
CPNE1-205ENST00000401607 PIP4P2Q8N4L2 257 aa20.48■□□□□ 0.87
CPNE1-205ENST00000401607 OR2T10Q8NGZ9 312 aa20.48■□□□□ 0.87
CPNE1-205ENST00000401607 RPRMQ9NS64 109 aa20.48■□□□□ 0.87
CPNE1-205ENST00000401607 SMCO3A2RU48 225 aa20.47■□□□□ 0.87
CPNE1-205ENST00000401607 FCN1O00602 326 aa20.47■□□□□ 0.87
CPNE1-205ENST00000401607 ACTL6BO94805 426 aa20.47■□□□□ 0.87
CPNE1-205ENST00000401607 EBI3Q14213 229 aa20.47■□□□□ 0.87
CPNE1-205ENST00000401607 HES1Q14469 280 aa20.47■□□□□ 0.87
CPNE1-205ENST00000401607 Q8N6K4 173 aa20.47■□□□□ 0.87
CPNE1-205ENST00000401607 LINC00052Q96N35 136 aa20.47■□□□□ 0.87
CPNE1-205ENST00000401607 BEX4Q9NWD9 120 aaPredicted RBP20.47■□□□□ 0.87
CPNE1-205ENST00000401607 IGLC7A0M8Q6 106 aa20.46■□□□□ 0.87
CPNE1-205ENST00000401607 TSPAN15O95858 294 aa20.46■□□□□ 0.87
CPNE1-205ENST00000401607 SRSF3P84103 164 aaKnown RBP20.46■□□□□ 0.87
CPNE1-205ENST00000401607 UQCC3Q6UW78 93 aa20.46■□□□□ 0.87
CPNE1-205ENST00000401607 C1orf159Q96HA4 380 aa20.46■□□□□ 0.87
CPNE1-205ENST00000401607 AGPAT2O15120 278 aa20.46■□□□□ 0.87
CPNE1-205ENST00000401607 OR13C7P0DN81 318 aa20.46■□□□□ 0.87
CPNE1-205ENST00000401607 ELLP55199 621 aaPredicted RBP20.46■□□□□ 0.87
CPNE1-205ENST00000401607 GNB1P62873 340 aa20.46■□□□□ 0.87
CPNE1-205ENST00000401607 DEFB113Q30KQ7 82 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms