RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 BAGE3Q86Y29 109 aa4.14□□□□□ -1.75
SMAD4-202ENST00000398417 BAGE2Q86Y30 109 aa4.14□□□□□ -1.75
SMAD4-202ENST00000398417 MEGF10Q96KG7 1140 aa4.14□□□□□ -1.75
SMAD4-202ENST00000398417 CIB3Q96Q77 187 aaPredicted RBP4.14□□□□□ -1.75
SMAD4-202ENST00000398417 GAL3ST2Q9H3Q3 398 aa4.14□□□□□ -1.75
SMAD4-202ENST00000398417 ZMAT4Q9H898 229 aa4.14□□□□□ -1.75
SMAD4-202ENST00000398417 TRAPPC1Q9Y5R8 145 aa4.14□□□□□ -1.75
SMAD4-202ENST00000398417 SELENOKQ9Y6D0 94 aa4.14□□□□□ -1.75
SMAD4-202ENST00000398417 CSMD2Q7Z408 3487 aa4.14□□□□□ -1.75
SMAD4-202ENST00000398417 LNP1A1A4G5 178 aa4.14□□□□□ -1.75
SMAD4-202ENST00000398417 CLDN14O95500 239 aa4.14□□□□□ -1.75
SMAD4-202ENST00000398417 OR9G9P0C7N8 305 aa4.14□□□□□ -1.75
SMAD4-202ENST00000398417 S100A7P31151 101 aa4.14□□□□□ -1.75
SMAD4-202ENST00000398417 TAS2R60P59551 318 aa4.14□□□□□ -1.75
SMAD4-202ENST00000398417 TNFRSF9Q07011 255 aa4.14□□□□□ -1.75
SMAD4-202ENST00000398417 KLRB1Q12918 225 aa4.14□□□□□ -1.75
SMAD4-202ENST00000398417 DMRTA1Q5VZB9 504 aa4.14□□□□□ -1.75
SMAD4-202ENST00000398417 UNQ5815/PRO19632Q6UWF5 114 aa4.14□□□□□ -1.75
SMAD4-202ENST00000398417 C11orf42Q8N5U0 333 aa4.14□□□□□ -1.75
SMAD4-202ENST00000398417 LSM10Q969L4 123 aaKnown RBP4.14□□□□□ -1.75
SMAD4-202ENST00000398417 MRAP2Q96G30 205 aa4.14□□□□□ -1.75
SMAD4-202ENST00000398417 PACRGQ96M98 296 aaPredicted RBP4.14□□□□□ -1.75
SMAD4-202ENST00000398417 RNASE1P07998 156 aaKnown RBP4.14□□□□□ -1.75
SMAD4-202ENST00000398417 HTN1P15515 57 aa4.14□□□□□ -1.75
SMAD4-202ENST00000398417 TAS2R45P59539 299 aa4.14□□□□□ -1.75
SMAD4-202ENST00000398417 GFI1BQ5VTD9 330 aa4.14□□□□□ -1.75
SMAD4-202ENST00000398417 OR4P4Q8NGL7 312 aa4.14□□□□□ -1.75
SMAD4-202ENST00000398417 NCBP2LA6PVI3 153 aaKnown RBP4.14□□□□□ -1.75
SMAD4-202ENST00000398417 GALR2O43603 387 aaPredicted RBP4.14□□□□□ -1.75
SMAD4-202ENST00000398417 BTF3P20290 206 aaKnown RBP4.14□□□□□ -1.75
SMAD4-202ENST00000398417 SMAGPQ0VAQ4 97 aa4.14□□□□□ -1.75
SMAD4-202ENST00000398417 KRTAP27-1Q3LI81 207 aa4.14□□□□□ -1.75
SMAD4-202ENST00000398417 VKORC1L1Q8N0U8 176 aa4.14□□□□□ -1.75
SMAD4-202ENST00000398417 NDUFS6O75380 124 aaKnown RBP4.13□□□□□ -1.75
SMAD4-202ENST00000398417 PTTG1IPP53801 180 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 SSX8Q7RTT4 187 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 OR10A7Q8NGE5 316 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 TRAV17A0A0B4J275 112 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 XKRY2A2RUG3 117 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 C1QTNF9BB2RNN3 333 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 SPATA31B1PQ5VZV4 182 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 DMRTC2Q8IXT2 367 aaPredicted RBP4.13□□□□□ -1.75
SMAD4-202ENST00000398417 RAX2Q96IS3 184 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 SNX22Q96L94 193 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 TUBA4BQ9H853 241 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 HES4Q9HCC6 221 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 WASHC3Q9Y3C0 194 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 ANAPC1Q9H1A4 1944 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 NKX6-3A6NJ46 265 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 ZNF729A6NN14 1252 aaPredicted RBP4.13□□□□□ -1.75
SMAD4-202ENST00000398417 SLC17A3O00476 420 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 ELOBQ15370 118 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 TMEM249Q2WGJ8 235 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 FAM90A2PQ658T7 463 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 SCGB1D4Q6XE38 83 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 A0A1B0GV90 55 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 C22orf46C9J442 243 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 C11orf94C9JXX5 98 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 MPDU1O75352 247 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 COQ2Q96H96 371 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 RNF7Q9UBF6 113 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 NDUFB4O95168 129 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 IL6RP08887 468 aaPredicted RBP4.13□□□□□ -1.75
SMAD4-202ENST00000398417 CECR9P0C854 216 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 GABRA6Q16445 453 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 CD177Q8N6Q3 437 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 ACY3Q96HD9 319 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 UBE2CO00762 179 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 ERVFRD-1P60508 538 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 RPL23P62829 140 aaKnown RBP4.13□□□□□ -1.75
SMAD4-202ENST00000398417 TNFAIP6P98066 277 aaPredicted RBP4.13□□□□□ -1.75
SMAD4-202ENST00000398417 SMIM21Q3B7S5 101 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 ACP7Q6ZNF0 438 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 TCF23Q7RTU1 214 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 GGACTQ9BVM4 153 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 MALRD1Q5VYJ5 2156 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 A0A1W2PNU3 283 aaPredicted RBP4.13□□□□□ -1.75
SMAD4-202ENST00000398417 PGPEP1LA6NFU8 196 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 RHODO00212 210 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 RNF224P0DH78 156 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 SELLP14151 372 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 PMS2P11Q13670 270 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 KDF1Q8NAX2 398 aaPredicted RBP4.13□□□□□ -1.75
SMAD4-202ENST00000398417 MDS2Q8NDY4 140 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 LOXL4Q96JB6 756 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 OR6C3Q9NZP0 311 aa4.13□□□□□ -1.75
SMAD4-202ENST00000398417 TRAV3A0A0B4J244 114 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 A6NNC1 897 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 IQCF6A8MYZ5 107 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 KBTBD11O94819 623 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 HPRT1P00492 218 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 CD99P14209 185 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 HEPN1Q6WQI6 88 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 MGST3O14880 152 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 GOSR1O95249 250 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 CA2P00918 260 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 C1QTNF9P0C862 333 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 REG1BP48304 166 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 FOXF2Q12947 444 aa4.12□□□□□ -1.75
SMAD4-202ENST00000398417 S100A7AQ86SG5 101 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms