RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 TMEM204Q9BSN7 226 aa7.26□□□□□ -1.25
LINC00558-201ENST00000569422 ZNF430Q9H8G1 570 aaPredicted RBP7.26□□□□□ -1.25
LINC00558-201ENST00000569422 IFNL4K9M1U5 179 aa7.25□□□□□ -1.25
LINC00558-201ENST00000569422 FOLR2P14207 255 aa7.25□□□□□ -1.25
LINC00558-201ENST00000569422 ARF6P62330 175 aa7.25□□□□□ -1.25
LINC00558-201ENST00000569422 SERF2P84101 59 aa7.25□□□□□ -1.25
LINC00558-201ENST00000569422 ELOBQ15370 118 aa7.25□□□□□ -1.25
LINC00558-201ENST00000569422 HEPN1Q6WQI6 88 aa7.25□□□□□ -1.25
LINC00558-201ENST00000569422 C1orf229Q6ZS94 237 aaPredicted RBP7.25□□□□□ -1.25
LINC00558-201ENST00000569422 WFDC8Q8IUA0 241 aa7.25□□□□□ -1.25
LINC00558-201ENST00000569422 LYG1Q8N1E2 194 aa7.25□□□□□ -1.25
LINC00558-201ENST00000569422 RNF2Q99496 336 aa7.25□□□□□ -1.25
LINC00558-201ENST00000569422 HSD17B10Q99714 261 aaKnown RBP7.25□□□□□ -1.25
LINC00558-201ENST00000569422 SMIM7Q9BQ49 75 aa7.25□□□□□ -1.25
LINC00558-201ENST00000569422 TMEM147Q9BVK8 224 aa7.25□□□□□ -1.25
LINC00558-201ENST00000569422 TUBA4BQ9H853 241 aa7.25□□□□□ -1.25
LINC00558-201ENST00000569422 KALRNO60229 2985 aa7.25□□□□□ -1.25
LINC00558-201ENST00000569422 RAB29O14966 203 aa7.25□□□□□ -1.25
LINC00558-201ENST00000569422 TRGC2P03986 189 aa7.25□□□□□ -1.25
LINC00558-201ENST00000569422 GZMHP20718 246 aa7.25□□□□□ -1.25
LINC00558-201ENST00000569422 S100A7P31151 101 aa7.25□□□□□ -1.25
LINC00558-201ENST00000569422 CDKN1AP38936 164 aa7.25□□□□□ -1.25
LINC00558-201ENST00000569422 COMPP49747 757 aaPredicted RBP7.25□□□□□ -1.25
LINC00558-201ENST00000569422 TNFAIP6P98066 277 aaPredicted RBP7.25□□□□□ -1.25
LINC00558-201ENST00000569422 WDR25Q64LD2 544 aaPredicted RBP7.25□□□□□ -1.25
LINC00558-201ENST00000569422 FAM216BQ8N7L0 139 aa7.25□□□□□ -1.25
LINC00558-201ENST00000569422 OR2D3Q8NGH3 330 aa7.25□□□□□ -1.25
LINC00558-201ENST00000569422 S1PR3Q99500 378 aa7.25□□□□□ -1.25
LINC00558-201ENST00000569422 PSMG3Q9BT73 122 aaPredicted RBP7.25□□□□□ -1.25
LINC00558-201ENST00000569422 SMDT1Q9H4I9 107 aa7.25□□□□□ -1.25
LINC00558-201ENST00000569422 MBD3L4A6NDZ8 208 aaPredicted RBP7.24□□□□□ -1.25
LINC00558-201ENST00000569422 MBD3L3A6NE82 208 aaPredicted RBP7.24□□□□□ -1.25
LINC00558-201ENST00000569422 MBD3L5A6NJ08 208 aaPredicted RBP7.24□□□□□ -1.25
LINC00558-201ENST00000569422 MGST3O14880 152 aa7.24□□□□□ -1.25
LINC00558-201ENST00000569422 PAGE4O60829 102 aa7.24□□□□□ -1.25
LINC00558-201ENST00000569422 ADH4P08319 380 aa7.24□□□□□ -1.25
LINC00558-201ENST00000569422 MAS1LP35410 378 aa7.24□□□□□ -1.25
LINC00558-201ENST00000569422 RTP5Q14D33 572 aa7.24□□□□□ -1.25
LINC00558-201ENST00000569422 CST9LP1Q5W188 147 aa7.24□□□□□ -1.25
LINC00558-201ENST00000569422 DPPA3Q6W0C5 159 aa7.24□□□□□ -1.25
LINC00558-201ENST00000569422 CISD2Q8N5K1 135 aaKnown RBP7.24□□□□□ -1.25
LINC00558-201ENST00000569422 MBD3L2Q8NHZ7 208 aaPredicted RBP7.24□□□□□ -1.25
LINC00558-201ENST00000569422 FAM110AQ9BQ89 295 aa7.24□□□□□ -1.25
LINC00558-201ENST00000569422 NPCDR1Q9BY65 106 aa7.24□□□□□ -1.25
LINC00558-201ENST00000569422 CALYQ9NYX4 217 aa7.24□□□□□ -1.25
LINC00558-201ENST00000569422 CISD1Q9NZ45 108 aaKnown RBP7.24□□□□□ -1.25
LINC00558-201ENST00000569422 VAX2Q9UIW0 290 aa7.24□□□□□ -1.25
LINC00558-201ENST00000569422 FAM90A26D6RGX4 464 aa7.24□□□□□ -1.25
LINC00558-201ENST00000569422 RRHO14718 337 aa7.24□□□□□ -1.25
LINC00558-201ENST00000569422 PF4P02776 101 aa7.24□□□□□ -1.25
LINC00558-201ENST00000569422 NPSP0C0P6 89 aa7.24□□□□□ -1.25
LINC00558-201ENST00000569422 OR8U8P0C7N1 319 aa7.24□□□□□ -1.25
LINC00558-201ENST00000569422 ID1P41134 155 aa7.24□□□□□ -1.25
LINC00558-201ENST00000569422 ERVK-16P61578 105 aa7.24□□□□□ -1.25
LINC00558-201ENST00000569422 EIF4EBP1Q13541 118 aaPredicted RBP7.24□□□□□ -1.25
LINC00558-201ENST00000569422 TIMM23BQ5SRD1 257 aa7.24□□□□□ -1.25
LINC00558-201ENST00000569422 ZNF66Q6ZN08 573 aa7.24□□□□□ -1.25
LINC00558-201ENST00000569422 MRGPRGQ86SM5 289 aa7.24□□□□□ -1.25
LINC00558-201ENST00000569422 Q8TCH9 128 aa7.24□□□□□ -1.25
LINC00558-201ENST00000569422 SSMEM1Q8WWF3 244 aa7.24□□□□□ -1.25
LINC00558-201ENST00000569422 PINX1Q96BK5 328 aaKnown RBP7.24□□□□□ -1.25
LINC00558-201ENST00000569422 SNX22Q96L94 193 aa7.24□□□□□ -1.25
LINC00558-201ENST00000569422 GGACTQ9BVM4 153 aa7.24□□□□□ -1.25
LINC00558-201ENST00000569422 RAB1BQ9H0U4 201 aa7.24□□□□□ -1.25
LINC00558-201ENST00000569422 FBLL1A6NHQ2 334 aaKnown RBP7.24□□□□□ -1.25
LINC00558-201ENST00000569422 C1QTNF9BB2RNN3 333 aa7.24□□□□□ -1.25
LINC00558-201ENST00000569422 TMPRSS2O15393 492 aa7.24□□□□□ -1.25
LINC00558-201ENST00000569422 PPIHO43447 177 aaKnown RBP7.24□□□□□ -1.25
LINC00558-201ENST00000569422 IFNA1P01562 189 aa7.24□□□□□ -1.25
LINC00558-201ENST00000569422 PSMB3P49720 205 aa7.24□□□□□ -1.25
LINC00558-201ENST00000569422 ATP5IP56385 69 aaPredicted RBP7.24□□□□□ -1.25
LINC00558-201ENST00000569422 MZT1Q08AG7 82 aa7.24□□□□□ -1.25
LINC00558-201ENST00000569422 RBMXL3Q8N7X1 1067 aaKnown RBP7.24□□□□□ -1.25
LINC00558-201ENST00000569422 MBD3L1Q8WWY6 194 aa7.24□□□□□ -1.25
LINC00558-201ENST00000569422 RND1Q92730 232 aa7.24□□□□□ -1.25
LINC00558-201ENST00000569422 GEMIN7Q9H840 131 aaKnown RBP7.24□□□□□ -1.25
LINC00558-201ENST00000569422 OR6C3Q9NZP0 311 aa7.24□□□□□ -1.25
LINC00558-201ENST00000569422 PMS2P5A8MQ11 134 aa7.23□□□□□ -1.25
LINC00558-201ENST00000569422 AP4M1O00189 453 aa7.23□□□□□ -1.25
LINC00558-201ENST00000569422 MMP23AO75900 390 aa7.23□□□□□ -1.25
LINC00558-201ENST00000569422 ZNF25P17030 456 aaPredicted RBP7.23□□□□□ -1.25
LINC00558-201ENST00000569422 GLRXP35754 106 aa7.23□□□□□ -1.25
LINC00558-201ENST00000569422 CD81P60033 236 aa7.23□□□□□ -1.25
LINC00558-201ENST00000569422 MEF2BQ02080 365 aaPredicted RBP7.23□□□□□ -1.25
LINC00558-201ENST00000569422 FAM90A1Q86YD7 464 aa7.23□□□□□ -1.25
LINC00558-201ENST00000569422 ALKBH7Q9BT30 221 aaPredicted RBP7.23□□□□□ -1.25
LINC00558-201ENST00000569422 C15orf62A8K5M9 175 aa7.23□□□□□ -1.25
LINC00558-201ENST00000569422 P0C879 139 aa7.23□□□□□ -1.25
LINC00558-201ENST00000569422 PAX6P26367 422 aa7.23□□□□□ -1.25
LINC00558-201ENST00000569422 GFI1BQ5VTD9 330 aa7.23□□□□□ -1.25
LINC00558-201ENST00000569422 SP5Q6BEB4 398 aaPredicted RBP7.23□□□□□ -1.25
LINC00558-201ENST00000569422 SLC35E3Q7Z769 313 aa7.23□□□□□ -1.25
LINC00558-201ENST00000569422 OR51G1Q8NGK1 321 aa7.23□□□□□ -1.25
LINC00558-201ENST00000569422 CIB3Q96Q77 187 aaPredicted RBP7.23□□□□□ -1.25
LINC00558-201ENST00000569422 TMEM208Q9BTX3 173 aa7.23□□□□□ -1.25
LINC00558-201ENST00000569422 ACTR3CQ9C0K3 210 aaPredicted RBP7.23□□□□□ -1.25
LINC00558-201ENST00000569422 GCM1Q9NP62 436 aa7.23□□□□□ -1.25
LINC00558-201ENST00000569422 GFOD1Q9NXC2 390 aa7.23□□□□□ -1.25
LINC00558-201ENST00000569422 TRAV1-1A0A0B4J248 108 aa7.22□□□□□ -1.25
LINC00558-201ENST00000569422 K7EQM0 130 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms