RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 SelenohQ3UQA7 116 aa20.42■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Nkain2Q4PNJ2 208 aa20.42■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Rpusd1Q8VCZ8 306 aa20.42■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Olfr1454Q8VFW2 307 aa20.42■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Olfr1448Q8VFX1 314 aa20.42■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Olfr1272Q8VGN8 308 aa20.42■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Sf3b5Q923D4 86 aaKnown RBP20.42■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Herpud1Q9JJK5 391 aa20.42■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Mpdu1Q9R0Q9 247 aa20.42■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Dmrta1Q8CFG4 490 aa20.42■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Cox20Q9D7J4 117 aa20.42■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Tnks1bp1P58871 1720 aa20.42■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Prr22F6TNE3 422 aa20.42■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Cd7P50283 210 aa20.42■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Znf629Q6A085 867 aa20.42■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Vmn1r50Q9EP51 310 aa20.42■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Srsf10Q9R0U0 262 aaKnown RBP20.42■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Tex52Q3TTI8 308 aa20.41■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Prss38Q3UKY7 322 aa20.41■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Ido2Q8R0V5 405 aa20.41■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Olfr822Q8VFU1 312 aa20.41■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Olfr1383Q7TQT2 311 aa20.41■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Erv3Q9DAX3 200 aa20.41■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 LexmA2AVQ5 414 aa20.41■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Defa13P50711 93 aa20.41■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Znf511Q6P0X2 227 aa20.41■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Bles03Q8VD62 251 aa20.41■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 NtmQ99PJ0 344 aa20.41■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Cyb5r3Q9DCN2 301 aaKnown RBP20.41■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Ccl1P10146 92 aa20.41■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Igfbp3P47878 292 aa20.41■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Lbx1P52955 282 aa20.41■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Cxxc4Q6NXI8 198 aa20.41■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Ubr2Q6WKZ8 1755 aa20.41■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Ighv1-43A0A0A6YXN5 117 aa20.4■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Vmn1r149E9PWL6 307 aa20.4■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Vmn1r101E9Q365 307 aa20.4■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Defa30E9QPZ2 93 aa20.4■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Vmn1r158G3UY92 307 aa20.4■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Lgals9O08573 353 aaKnown RBP20.4■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Foxr2Q3UM89 302 aa20.4■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Olfr1330Q8VEY6 315 aa20.4■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Adam8Q05910 826 aa20.4■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Znf235Q61116 645 aa20.4■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Olfr1184Q8VG86 311 aa20.4■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Gpr34Q9R1K6 375 aa20.4■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Nlgn4lB0F2B4 945 aa20.4■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Nudt10P0C027 164 aa20.4■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Nudt11P0C028 164 aa20.4■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 ShbQ6PD21 503 aa20.4■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Rbpms2Q8VC52 206 aaKnown RBP20.4■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Olfr1440Q8VFV4 315 aa20.4■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Tbx19Q99ME7 446 aa20.4■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Ppp1r1aQ9ERT9 171 aa20.4■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Gm10358A0A1D5RLD8 333 aa20.4■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Ren1P06281 402 aa20.4■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 GapdhP16858 333 aaKnown RBP20.4■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 F2rl1P55086 399 aa20.4■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Prss48Q14B25 312 aa20.4■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Otud1Q9CUB6 454 aa20.4■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 1700008P02RikQ9DAJ8 175 aa20.4■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Gm3839S4R1W1 333 aa20.4■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Mgst2A2RST1 147 aa20.4■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 ShbgP97497 403 aa20.4■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Olfr16Q62007 309 aa20.4■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Sirt7Q8BKJ9 402 aa20.4■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Lsm11Q8BUV6 361 aa20.4■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Slc6a8Q8VBW1 640 aa20.4■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Asb10Q91ZT7 467 aa20.4■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Slc25a10Q9QZD8 287 aa20.4■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Mfap5Q9QZJ6 164 aa20.4■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 BC025446A0A087WQT1 134 aa20.39■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Syngr2O55101 224 aa20.39■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Dhrs2Q149L0 282 aa20.39■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Pam16Q9CQV1 125 aa20.39■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Tceal8Q9CZY2 117 aa20.39■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Josd1Q9DBJ6 202 aa20.39■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Sh2d2aQ9QXK9 374 aa20.39■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Tmem50bQ9D1X9 158 aa20.39■□□□□ 0.85
Sh3rf1-201ENSMUST00000034060 Ammecr1Q9JHT5 344 aaKnown RBP20.39■□□□□ 0.85
Sh3rf1-201ENSMUST00000034060 Gab2Q9Z1S8 665 aa20.39■□□□□ 0.85
Sh3rf1-201ENSMUST00000034060 Vmn1r61W4VSP5 300 aa20.39■□□□□ 0.85
Sh3rf1-201ENSMUST00000034060 Aqp7O54794 303 aa20.39■□□□□ 0.85
Sh3rf1-201ENSMUST00000034060 Q497N7 227 aa20.39■□□□□ 0.85
Sh3rf1-201ENSMUST00000034060 Tmem38bQ9DAV9 292 aa20.39■□□□□ 0.85
Sh3rf1-201ENSMUST00000034060 Mmp16Q9WTR0 607 aa20.39■□□□□ 0.85
Sh3rf1-201ENSMUST00000034060 Olfr467L7N455 308 aa20.39■□□□□ 0.85
Sh3rf1-201ENSMUST00000034060 B2mP01887 119 aa20.39■□□□□ 0.85
Sh3rf1-201ENSMUST00000034060 Hoxa3P02831 443 aa20.39■□□□□ 0.85
Sh3rf1-201ENSMUST00000034060 Klf16P58334 251 aa20.39■□□□□ 0.85
Sh3rf1-201ENSMUST00000034060 Nudt22Q9DD16 308 aa20.39■□□□□ 0.85
Sh3rf1-201ENSMUST00000034060 Sssca1P56873 199 aa20.38■□□□□ 0.85
Sh3rf1-201ENSMUST00000034060 Trat1Q3UU67 187 aa20.38■□□□□ 0.85
Sh3rf1-201ENSMUST00000034060 Scgb2b24Q7M747 112 aa20.38■□□□□ 0.85
Sh3rf1-201ENSMUST00000034060 SinhcafQ8C8M1 221 aaKnown RBP20.38■□□□□ 0.85
Sh3rf1-201ENSMUST00000034060 Utp23Q9CX11 249 aaKnown RBP20.38■□□□□ 0.85
Sh3rf1-201ENSMUST00000034060 Q9CX63 252 aa20.38■□□□□ 0.85
Sh3rf1-201ENSMUST00000034060 Olfr1024A2ASU7 327 aa20.38■□□□□ 0.85
Sh3rf1-201ENSMUST00000034060 P01803 113 aa20.38■□□□□ 0.85
Sh3rf1-201ENSMUST00000034060 Olfr824Q8VFU4 315 aa20.38■□□□□ 0.85
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms