Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Gm25239-201ENSMUST00000174915 86 ntBASIC44.96■■■■■ 4.79
ShbQ6PD21 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC41.86■■■■■ 4.29
ShbQ6PD21 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC41.18■■■■■ 4.18
ShbQ6PD21 Gm24109-201ENSMUST00000175489 103 ntBASIC39.26■■■■□ 3.88
ShbQ6PD21 Gm15042-201ENSMUST00000120212 883 ntBASIC38.67■■■■□ 3.78
ShbQ6PD21 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC38.02■■■■□ 3.68
ShbQ6PD21 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC37.89■■■■□ 3.66
ShbQ6PD21 Gm15045-201ENSMUST00000117359 883 ntBASIC37.75■■■■□ 3.63
ShbQ6PD21 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC37.73■■■■□ 3.63
ShbQ6PD21 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC37.56■■■■□ 3.6
ShbQ6PD21 Gm23366-201ENSMUST00000175022 89 ntBASIC37.44■■■■□ 3.58
ShbQ6PD21 AC153911.1-202ENSMUST00000218534 1034 ntBASIC36.84■■■■□ 3.49
ShbQ6PD21 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC36.48■■■■□ 3.43
ShbQ6PD21 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC36.46■■■■□ 3.43
ShbQ6PD21 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC36.44■■■■□ 3.42
ShbQ6PD21 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC36.28■■■■□ 3.4
ShbQ6PD21 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC36.2■■■■□ 3.39
ShbQ6PD21 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC35.88■■■■□ 3.33
ShbQ6PD21 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC35.87■■■■□ 3.33
ShbQ6PD21 Gm25238-201ENSMUST00000174914 89 ntBASIC35.72■■■■□ 3.31
ShbQ6PD21 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC35.71■■■■□ 3.31
ShbQ6PD21 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.31
ShbQ6PD21 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
ShbQ6PD21 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
ShbQ6PD21 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC34.95■■■■□ 3.19
ShbQ6PD21 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.92■■■■□ 3.18
ShbQ6PD21 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
ShbQ6PD21 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC34.74■■■■□ 3.15
ShbQ6PD21 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
ShbQ6PD21 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
ShbQ6PD21 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC34.47■■■■□ 3.11
ShbQ6PD21 Gm25262-201ENSMUST00000174934 133 ntBASIC34.46■■■■□ 3.11
ShbQ6PD21 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC34.4■■■■□ 3.1
ShbQ6PD21 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.38■■■■□ 3.09
ShbQ6PD21 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.18■■■■□ 3.06
ShbQ6PD21 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC34.18■■■■□ 3.06
ShbQ6PD21 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC34.15■■■■□ 3.06
ShbQ6PD21 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
ShbQ6PD21 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC34.04■■■■□ 3.04
ShbQ6PD21 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC34.03■■■■□ 3.04
ShbQ6PD21 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3.03
ShbQ6PD21 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.9■■■■□ 3.02
ShbQ6PD21 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC33.89■■■■□ 3.02
ShbQ6PD21 Gm26115-201ENSMUST00000175605 87 ntBASIC33.86■■■■□ 3.01
ShbQ6PD21 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC33.84■■■■□ 3.01
ShbQ6PD21 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC33.82■■■■□ 3
ShbQ6PD21 Gm27325-201ENSMUST00000175467 74 ntBASIC33.81■■■■□ 3
ShbQ6PD21 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■■□ 3
ShbQ6PD21 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC33.63■■■□□ 2.97
ShbQ6PD21 Gm8109-201ENSMUST00000194076 746 ntBASIC33.6■■■□□ 2.97
ShbQ6PD21 Rab21-202ENSMUST00000218831 843 ntBASIC33.57■■■□□ 2.96
ShbQ6PD21 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC33.55■■■□□ 2.96
ShbQ6PD21 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
ShbQ6PD21 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC33.38■■■□□ 2.93
ShbQ6PD21 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
ShbQ6PD21 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC33.29■■■□□ 2.92
ShbQ6PD21 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
ShbQ6PD21 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
ShbQ6PD21 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC33.19■■■□□ 2.9
ShbQ6PD21 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC33.19■■■□□ 2.9
ShbQ6PD21 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.06■■■□□ 2.88
ShbQ6PD21 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.01■■■□□ 2.88
ShbQ6PD21 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC33■■■□□ 2.87
ShbQ6PD21 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.97■■■□□ 2.87
ShbQ6PD21 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
ShbQ6PD21 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32.88■■■□□ 2.85
ShbQ6PD21 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC32.84■■■□□ 2.85
ShbQ6PD21 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
ShbQ6PD21 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32.72■■■□□ 2.83
ShbQ6PD21 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
ShbQ6PD21 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC32.6■■■□□ 2.81
ShbQ6PD21 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32.6■■■□□ 2.81
ShbQ6PD21 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
ShbQ6PD21 Gm17082-201ENSMUST00000166043 1091 ntBASIC32.55■■■□□ 2.8
ShbQ6PD21 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC32.54■■■□□ 2.8
ShbQ6PD21 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
ShbQ6PD21 Gm24804-201ENSMUST00000174982 85 ntBASIC32.49■■■□□ 2.79
ShbQ6PD21 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.45■■■□□ 2.78
ShbQ6PD21 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
ShbQ6PD21 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.32■■■□□ 2.77
ShbQ6PD21 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.22■■■□□ 2.75
ShbQ6PD21 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC32.21■■■□□ 2.75
ShbQ6PD21 Psd-208ENSMUST00000224556 2034 ntBASIC32.21■■■□□ 2.75
ShbQ6PD21 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC32.19■■■□□ 2.74
ShbQ6PD21 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32.16■■■□□ 2.74
ShbQ6PD21 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
ShbQ6PD21 Gm27322-201ENSMUST00000184007 104 ntBASIC32.15■■■□□ 2.74
ShbQ6PD21 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC32.1■■■□□ 2.73
ShbQ6PD21 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC32.09■■■□□ 2.73
ShbQ6PD21 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC32.05■■■□□ 2.72
ShbQ6PD21 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC32.02■■■□□ 2.72
ShbQ6PD21 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC31.98■■■□□ 2.71
ShbQ6PD21 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
ShbQ6PD21 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31.96■■■□□ 2.71
ShbQ6PD21 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC31.96■■■□□ 2.71
ShbQ6PD21 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
ShbQ6PD21 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
ShbQ6PD21 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31.87■■■□□ 2.69
ShbQ6PD21 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
ShbQ6PD21 Zfp131-205ENSMUST00000223812 663 ntBASIC31.83■■■□□ 2.69
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms