RNA–Protein interactions for RNA: YPR189W

SKI3, Transcript of Ski complex component and TPR protein, yeastyeast

Gene SKI3, Length 4,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKI3YPR189W YLR149CQ99296 730 aa1.8□□□□□ -2.12
SKI3YPR189W FBP1P09201 348 aa1.8□□□□□ -2.12
SKI3YPR189W KIN2P13186 1147 aaKnown RBP1.8□□□□□ -2.12
SKI3YPR189W CBP3P21560 335 aa1.8□□□□□ -2.12
SKI3YPR189W APN2P38207 520 aa1.8□□□□□ -2.12
SKI3YPR189W APE4P38821 490 aa1.8□□□□□ -2.12
SKI3YPR189W PIK1P39104 1066 aa1.8□□□□□ -2.12
SKI3YPR189W UBP7P40453 1071 aa1.8□□□□□ -2.12
SKI3YPR189W EXG2P52911 562 aa1.8□□□□□ -2.12
SKI3YPR189W YNR061CP53747 219 aa1.8□□□□□ -2.12
SKI3YPR189W YKR011CQ02209 353 aa1.8□□□□□ -2.12
SKI3YPR189W FCP1Q03254 732 aa1.8□□□□□ -2.12
SKI3YPR189W GIS4Q04233 774 aa1.8□□□□□ -2.12
SKI3YPR189W HLR1Q04429 423 aa1.8□□□□□ -2.12
SKI3YPR189W YLR287CQ05881 355 aa1.8□□□□□ -2.12
SKI3YPR189W ISA1Q07821 250 aaPredicted RBP1.8□□□□□ -2.12
SKI3YPR189W NGL1Q08213 363 aaKnown RBP1.8□□□□□ -2.12
SKI3YPR189W DPH6Q12429 685 aa1.8□□□□□ -2.12
SKI3YPR189W RPS17AP02407 136 aaKnown RBP1.8□□□□□ -2.12
SKI3YPR189W RPS4AP0CX35 261 aaKnown RBP1.8□□□□□ -2.12
SKI3YPR189W RPS4BP0CX36 261 aaKnown RBP1.8□□□□□ -2.12
SKI3YPR189W RPS17BP14127 136 aaKnown RBP1.8□□□□□ -2.12
SKI3YPR189W PDC5P16467 563 aaKnown RBP1.8□□□□□ -2.12
SKI3YPR189W SPO16P17122 198 aa1.8□□□□□ -2.12
SKI3YPR189W DBF4P32325 704 aa1.8□□□□□ -2.12
SKI3YPR189W LRG1P35688 1017 aa1.8□□□□□ -2.12
SKI3YPR189W YHR202WP38887 602 aa1.8□□□□□ -2.12
SKI3YPR189W MTD1Q02046 320 aaKnown RBP1.8□□□□□ -2.12
SKI3YPR189W GSF2Q04697 403 aaKnown RBP1.8□□□□□ -2.12
SKI3YPR189W SPN1Q06505 410 aaPredicted RBP1.8□□□□□ -2.12
SKI3YPR189W SLP1Q12232 587 aa1.8□□□□□ -2.12
SKI3YPR189W NOP56Q12460 504 aaKnown RBP RIP-Chip data1.8□□□□□ -2.12not detected
SKI3YPR189W SKM1Q12469 655 aa1.8□□□□□ -2.12
SKI3YPR189W TPK1P06244 397 aa1.8□□□□□ -2.12
SKI3YPR189W YEL076C-AP0CX16 216 aa1.8□□□□□ -2.12
SKI3YPR189W YLR464WP0CX17 216 aa1.8□□□□□ -2.12
SKI3YPR189W RED1P14291 827 aa1.8□□□□□ -2.12
SKI3YPR189W ATP12P22135 325 aa1.8□□□□□ -2.12
SKI3YPR189W SEC15P22224 910 aa1.8□□□□□ -2.12
SKI3YPR189W RPD3P32561 433 aa1.8□□□□□ -2.12
SKI3YPR189W PAH1P32567 862 aa1.8□□□□□ -2.12
SKI3YPR189W MDJ1P35191 511 aa1.8□□□□□ -2.12
SKI3YPR189W SHM2P37291 469 aaKnown RBP1.8□□□□□ -2.12
SKI3YPR189W NOP4P37838 685 aaKnown RBP1.8□□□□□ -2.12
SKI3YPR189W RRM3P38766 723 aa1.8□□□□□ -2.12
SKI3YPR189W YEL076CP39971 216 aa1.8□□□□□ -2.12
SKI3YPR189W VHR1P40522 640 aa1.8□□□□□ -2.12
SKI3YPR189W GPD2P41911 440 aaKnown RBP1.8□□□□□ -2.12
SKI3YPR189W ENP2P48234 707 aaKnown RBP1.8□□□□□ -2.12
SKI3YPR189W YAP1802P53309 568 aa1.8□□□□□ -2.12
SKI3YPR189W DSE4P53753 1117 aa1.8□□□□□ -2.12
SKI3YPR189W HSP82P02829 709 aaKnown RBP1.79□□□□□ -2.12
SKI3YPR189W CMP2P14747 604 aa1.79□□□□□ -2.12
SKI3YPR189W GUK1P15454 187 aaKnown RBP1.79□□□□□ -2.12
SKI3YPR189W HOP1P20050 605 aa1.79□□□□□ -2.12
SKI3YPR189W XRS2P33301 854 aa1.79□□□□□ -2.12
SKI3YPR189W DHR2P36009 735 aaPredicted RBP1.79□□□□□ -2.12
SKI3YPR189W APT2P36973 181 aa1.79□□□□□ -2.12
SKI3YPR189W ABZ1P37254 787 aaPredicted RBP1.79□□□□□ -2.12
SKI3YPR189W PZF1P39933 429 aa1.79□□□□□ -2.12
SKI3YPR189W SSY5P47002 699 aa1.79□□□□□ -2.12
SKI3YPR189W HFM1P51979 1187 aa1.79□□□□□ -2.12
SKI3YPR189W ARA2Q04212 335 aa1.79□□□□□ -2.12
SKI3YPR189W RSC58Q07979 502 aa1.79□□□□□ -2.12
SKI3YPR189W HUA2Q12134 243 aa1.79□□□□□ -2.12
SKI3YPR189W SMC6Q12749 1114 aa1.79□□□□□ -2.12
SKI3YPR189W YBR182C-AQ8TGU6 64 aa1.79□□□□□ -2.12
SKI3YPR189W YPR117WQ06116 2489 aa1.79□□□□□ -2.12
SKI3YPR189W VAS1P07806 1104 aaKnown RBP1.79□□□□□ -2.12
SKI3YPR189W SWI6P09959 803 aa1.79□□□□□ -2.12
SKI3YPR189W ADH4P10127 382 aa1.79□□□□□ -2.12
SKI3YPR189W HSF1P10961 833 aa1.79□□□□□ -2.12
SKI3YPR189W POL3P15436 1097 aa1.79□□□□□ -2.12
SKI3YPR189W PRE8P23639 250 aa1.79□□□□□ -2.12
SKI3YPR189W IMG2P25642 146 aaPredicted RBP1.79□□□□□ -2.12
SKI3YPR189W GCD7P32502 381 aaPredicted RBP1.79□□□□□ -2.12
SKI3YPR189W YKL050CP35736 922 aa1.79□□□□□ -2.12
SKI3YPR189W LYS14P40971 790 aa1.79□□□□□ -2.12
SKI3YPR189W HDA1P53973 706 aa1.79□□□□□ -2.12
SKI3YPR189W SYF1Q04048 859 aaPredicted RBP1.79□□□□□ -2.12
SKI3YPR189W TDA9Q04545 1251 aa1.79□□□□□ -2.12
SKI3YPR189W SGD1Q06132 899 aa1.79□□□□□ -2.12
SKI3YPR189W HOS1Q12214 470 aa1.79□□□□□ -2.12
SKI3YPR189W APM4Q99186 491 aa1.79□□□□□ -2.12
SKI3YPR189W PMD1P32634 1753 aa1.79□□□□□ -2.12
SKI3YPR189W GPM1P00950 247 aaKnown RBP1.79□□□□□ -2.12
SKI3YPR189W SES1P07284 462 aaKnown RBP1.79□□□□□ -2.12
SKI3YPR189W NAT1P12945 854 aaKnown RBP1.79□□□□□ -2.12
SKI3YPR189W MET8P15807 274 aa1.79□□□□□ -2.12
SKI3YPR189W SNF5P18480 905 aa1.79□□□□□ -2.12
SKI3YPR189W VPH1P32563 840 aaKnown RBP1.79□□□□□ -2.12
SKI3YPR189W STE13P33894 931 aa1.79□□□□□ -2.12
SKI3YPR189W YKR018CP36114 725 aa1.79□□□□□ -2.12
SKI3YPR189W NOP16P40007 231 aaKnown RBP1.79□□□□□ -2.12
SKI3YPR189W ARF3P40994 183 aaRIP-Chip data1.79□□□□□ -2.12not detected
SKI3YPR189W ATP22P50273 684 aaPredicted RBP1.79□□□□□ -2.12
SKI3YPR189W YGR016WP53209 190 aa1.79□□□□□ -2.12
SKI3YPR189W RSM24Q03976 319 aa1.79□□□□□ -2.12
SKI3YPR189W TAF11Q04226 346 aa1.79□□□□□ -2.12
SKI3YPR189W MFB1Q04922 465 aa1.79□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 40.6 ms