RNA–Protein interactions for RNA: YPR049C

ATG11, Transcript of Adapter protein for pexophagy and the Cvt targeting pathway, yeastyeast

Gene ATG11, Length 3,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG11YPR049C GSY1P23337 708 aa2.46□□□□□ -2.02
ATG11YPR049C PTP1P25044 335 aa2.46□□□□□ -2.02
ATG11YPR049C COY1P34237 679 aa2.46□□□□□ -2.02
ATG11YPR049C RPT6Q01939 405 aaKnown RBP2.46□□□□□ -2.02
ATG11YPR049C CUR1Q06469 252 aa2.46□□□□□ -2.02
ATG11YPR049C YLL058WQ12198 575 aa2.46□□□□□ -2.02
ATG11YPR049C VMA4P22203 233 aaKnown RBP2.45□□□□□ -2.02
ATG11YPR049C MRP8P35719 219 aa2.45□□□□□ -2.02
ATG11YPR049C RGD1P38339 666 aa2.45□□□□□ -2.02
ATG11YPR049C FIS1P40515 155 aa2.45□□□□□ -2.02
ATG11YPR049C CAF130P53280 1122 aaPredicted RBP2.45□□□□□ -2.02
ATG11YPR049C YPL109CQ02981 657 aa2.45□□□□□ -2.02
ATG11YPR049C YMR206WQ03695 313 aa2.45□□□□□ -2.02
ATG11YPR049C YDL057WQ07379 328 aa2.45□□□□□ -2.02
ATG11YPR049C HIF1Q12373 385 aa2.45□□□□□ -2.02
ATG11YPR049C BI4P03879 638 aa2.45□□□□□ -2.02
ATG11YPR049C MTF1P14908 341 aaKnown RBP2.45□□□□□ -2.02
ATG11YPR049C MAK31P23059 88 aa2.45□□□□□ -2.02
ATG11YPR049C SWE1P32944 819 aa2.45□□□□□ -2.02
ATG11YPR049C PIN4P34217 668 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02not detected
ATG11YPR049C MNP1P53163 194 aaPredicted RBP2.45□□□□□ -2.02
ATG11YPR049C SNO2P53823 222 aa2.45□□□□□ -2.02
ATG11YPR049C MET6P05694 767 aaKnown RBP2.45□□□□□ -2.02
ATG11YPR049C NGG1P32494 702 aa2.45□□□□□ -2.02
ATG11YPR049C GCS1P35197 352 aa2.45□□□□□ -2.02
ATG11YPR049C MNR2P35724 969 aa2.45□□□□□ -2.02
ATG11YPR049C ATG36P46983 293 aa2.45□□□□□ -2.02
ATG11YPR049C UBA2P52488 636 aa2.45□□□□□ -2.02
ATG11YPR049C LSB1P53281 241 aa2.45□□□□□ -2.02
ATG11YPR049C TY1A-LR4P0C2I8 440 aaKnown RBP2.44□□□□□ -2.02
ATG11YPR049C TY1A-DR6P0CX70 440 aa2.44□□□□□ -2.02
ATG11YPR049C TY1A-ER1P0CX71 440 aa2.44□□□□□ -2.02
ATG11YPR049C TY1A-LR2P0CX72 440 aa2.44□□□□□ -2.02
ATG11YPR049C TY1A-PLP0CX73 440 aa2.44□□□□□ -2.02
ATG11YPR049C TY1A-JR1P0CX74 440 aa2.44□□□□□ -2.02
ATG11YPR049C TY1A-LR3P0CX75 440 aa2.44□□□□□ -2.02
ATG11YPR049C TY1A-ML2P0CX76 440 aa2.44□□□□□ -2.02
ATG11YPR049C RNR3P21672 869 aaKnown RBP2.44□□□□□ -2.02
ATG11YPR049C YKL050CP35736 922 aa2.44□□□□□ -2.02
ATG11YPR049C YKR051WP36142 418 aa2.44□□□□□ -2.02
ATG11YPR049C RPN10P38886 268 aaKnown RBP2.44□□□□□ -2.02
ATG11YPR049C MBP1P39678 833 aa2.44□□□□□ -2.02
ATG11YPR049C UBX6P47049 396 aa2.44□□□□□ -2.02
ATG11YPR049C CCT8P47079 568 aaKnown RBP2.44□□□□□ -2.02
ATG11YPR049C ERP6P53198 216 aa2.44□□□□□ -2.02
ATG11YPR049C BRE4Q07660 1125 aa2.44□□□□□ -2.02
ATG11YPR049C TY1A-GR1Q12085 440 aa2.44□□□□□ -2.02
ATG11YPR049C RKM4Q12504 494 aa2.44□□□□□ -2.02
ATG11YPR049C ARP6Q12509 438 aa2.44□□□□□ -2.02
ATG11YPR049C TY1A-PR3Q6Q5H1 440 aaKnown RBP2.44□□□□□ -2.02
ATG11YPR049C TY1A-OLQ92392 440 aaKnown RBP2.44□□□□□ -2.02
ATG11YPR049C UBR1P19812 1950 aa2.44□□□□□ -2.02
ATG11YPR049C MCM3P24279 971 aaKnown RBP2.44□□□□□ -2.02
ATG11YPR049C RSA4P25382 515 aaKnown RBP2.44□□□□□ -2.02
ATG11YPR049C GPI10P30777 616 aa2.44□□□□□ -2.02
ATG11YPR049C YGL140CP53120 1219 aa2.44□□□□□ -2.02
ATG11YPR049C SSF2Q12153 453 aaPredicted RBP2.44□□□□□ -2.02
ATG11YPR049C YDR061WQ12298 539 aa2.44□□□□□ -2.02
ATG11YPR049C TRP3P00937 484 aa2.43□□□□□ -2.02
ATG11YPR049C YSC84P32793 468 aa2.43□□□□□ -2.02
ATG11YPR049C CCL1P37366 393 aa2.43□□□□□ -2.02
ATG11YPR049C DUG2P38149 878 aa2.43□□□□□ -2.02
ATG11YPR049C CSM2P40465 213 aa2.43□□□□□ -2.02
ATG11YPR049C ALY2P47029 1046 aa2.43□□□□□ -2.02
ATG11YPR049C CNM67P53865 581 aaKnown RBP2.43□□□□□ -2.02
ATG11YPR049C NSE5Q03718 556 aa2.43□□□□□ -2.02
ATG11YPR049C RSC3Q06639 885 aa2.43□□□□□ -2.02
ATG11YPR049C RXT3Q07458 294 aa2.43□□□□□ -2.02
ATG11YPR049C TOR2P32600 2474 aaKnown RBP2.43□□□□□ -2.02
ATG11YPR049C ARL1P38116 183 aaKnown RBP2.43□□□□□ -2.02
ATG11YPR049C YIL108WP40483 696 aaKnown RBP2.43□□□□□ -2.02
ATG11YPR049C IRC24P40580 263 aa2.43□□□□□ -2.02
ATG11YPR049C SAD1P43589 448 aa2.43□□□□□ -2.02
ATG11YPR049C YDR514CQ04408 483 aa2.43□□□□□ -2.02
ATG11YPR049C OPI10Q08202 246 aa2.43□□□□□ -2.02
ATG11YPR049C DNL4Q08387 944 aaPredicted RBP2.43□□□□□ -2.02
ATG11YPR049C ADE3P07245 946 aaKnown RBP2.43□□□□□ -2.02
ATG11YPR049C RPL43AP0CX25 92 aaKnown RBP2.43□□□□□ -2.02
ATG11YPR049C RPL43BP0CX26 92 aa2.43□□□□□ -2.02
ATG11YPR049C TCP1P12612 559 aaKnown RBP2.43□□□□□ -2.02
ATG11YPR049C SGF29P25554 259 aa2.43□□□□□ -2.02
ATG11YPR049C HIS7P33734 552 aaKnown RBP2.43□□□□□ -2.02
ATG11YPR049C PIB2P53191 635 aa2.43□□□□□ -2.02
ATG11YPR049C MRPS35P53292 345 aa2.43□□□□□ -2.02
ATG11YPR049C YHM2Q04013 314 aa2.43□□□□□ -2.02
ATG11YPR049C SPN1Q06505 410 aaPredicted RBP2.43□□□□□ -2.02
ATG11YPR049C YIG1Q08956 461 aa2.43□□□□□ -2.02
ATG11YPR049C SLA2P33338 968 aa2.42□□□□□ -2.02
ATG11YPR049C VPS8P39702 1274 aa2.42□□□□□ -2.02
ATG11YPR049C YGL138CP53122 345 aa2.42□□□□□ -2.02
ATG11YPR049C ZPR1P53303 486 aaKnown RBP2.42□□□□□ -2.02
ATG11YPR049C YDL144CQ07589 356 aa2.42□□□□□ -2.02
ATG11YPR049C CLP1Q08685 445 aaPredicted RBP2.42□□□□□ -2.02
ATG11YPR049C SRO7Q12038 1033 aa2.42□□□□□ -2.02
ATG11YPR049C CYC1P00044 109 aaPredicted RBP2.42□□□□□ -2.02
ATG11YPR049C RIT1P23796 513 aa2.42□□□□□ -2.02
ATG11YPR049C PEX1P24004 1043 aa2.42□□□□□ -2.02
ATG11YPR049C SED4P25365 1065 aa2.42□□□□□ -2.02
ATG11YPR049C RRP14P36080 434 aaKnown RBP2.42□□□□□ -2.02
ATG11YPR049C APT2P36973 181 aa2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 32 ms