RNA–Protein interactions for RNA: YPL116W

HOS3, Transcript of Trichostatin A-insensitive homodimeric histone deacetylase (HDAC), yeast

Gene HOS3, Length 2,094 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HOS3	YPL116W	PAN2	P53010	1115 aa	Predicted RBP	4.2	□□□□□ -1.74
HOS3	YPL116W	MAL11	P53048	616 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	CGR1	P53188	120 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	TOF1	P53840	1238 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	SQS1	P53866	767 aa	Known RBP	4.2	□□□□□ -1.74
HOS3	YPL116W	PDS5	Q04264	1277 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	YML082W	Q04533	649 aa	Known RBP	4.2	□□□□□ -1.74
HOS3	YPL116W	YDL114W	Q07530	308 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	SIL1	Q08199	421 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	APL4	Q12028	832 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	PIN2	Q12057	282 aa		4.2	□□□□□ -1.74
HOS3	YPL116W	ERG12	P07277	443 aa		4.19	□□□□□ -1.74
HOS3	YPL116W	SUP45	P12385	437 aa	Known RBP	4.19	□□□□□ -1.74
HOS3	YPL116W	FUS3	P16892	353 aa	Known RBP	4.19	□□□□□ -1.74
HOS3	YPL116W	SEC62	P21825	274 aa		4.19	□□□□□ -1.74
HOS3	YPL116W	SRM1	P21827	482 aa		4.19	□□□□□ -1.74
HOS3	YPL116W	RPI1	P23250	407 aa	Known RBP	4.19	□□□□□ -1.74
HOS3	YPL116W	PRD1	P25375	712 aa		4.19	□□□□□ -1.74
HOS3	YPL116W	MEI5	P32489	222 aa		4.19	□□□□□ -1.74
HOS3	YPL116W	ORC2	P32833	620 aa		4.19	□□□□□ -1.74
HOS3	YPL116W	MRS6	P32864	603 aa	Known RBP	4.19	□□□□□ -1.74
HOS3	YPL116W	GDH2	P33327	1092 aa	Known RBP	4.19	□□□□□ -1.74
HOS3	YPL116W	YIL161W	P40449	235 aa	Known RBP	4.19	□□□□□ -1.74
HOS3	YPL116W	SNL1	P40548	159 aa		4.19	□□□□□ -1.74
HOS3	YPL116W	YIL001W	P40560	513 aa		4.19	□□□□□ -1.74
HOS3	YPL116W	LYS14	P40971	790 aa		4.19	□□□□□ -1.74
HOS3	YPL116W	QRI1	P43123	477 aa	Known RBP	4.19	□□□□□ -1.74
HOS3	YPL116W	YGL176C	P46945	554 aa		4.19	□□□□□ -1.74
HOS3	YPL116W	YJR107W	P47145	328 aa		4.19	□□□□□ -1.74
HOS3	YPL116W	YML6	P51998	286 aa		4.19	□□□□□ -1.74
HOS3	YPL116W	YGR054W	P53235	642 aa	Known RBP	4.19	□□□□□ -1.74
HOS3	YPL116W	CWC25	P53854	179 aa	Known RBP	4.19	□□□□□ -1.74
HOS3	YPL116W	DAK1	P54838	584 aa	Known RBP	4.19	□□□□□ -1.74
HOS3	YPL116W	TBF1	Q02457	562 aa		4.19	□□□□□ -1.74
HOS3	YPL116W	IRC4	Q03036	179 aa		4.19	□□□□□ -1.74
HOS3	YPL116W	PUS7	Q08647	676 aa	Known RBP	4.19	□□□□□ -1.74
HOS3	YPL116W	TIP41	Q12199	356 aa		4.19	□□□□□ -1.74
HOS3	YPL116W	MMP1	Q12372	583 aa		4.19	□□□□□ -1.74
HOS3	YPL116W	RTR2	Q12378	196 aa		4.19	□□□□□ -1.74
HOS3	YPL116W	YLR358C	O13565	187 aa		4.18	□□□□□ -1.74
HOS3	YPL116W	MATALPHA2	P0CY08	210 aa		4.18	□□□□□ -1.74
HOS3	YPL116W	HMLALPHA2	P0CY09	210 aa		4.18	□□□□□ -1.74
HOS3	YPL116W	BIK1	P11709	440 aa		4.18	□□□□□ -1.74
HOS3	YPL116W	RAD57	P25301	460 aa		4.18	□□□□□ -1.74
HOS3	YPL116W	BUD23	P25627	275 aa	Predicted RBP	4.18	□□□□□ -1.74
HOS3	YPL116W	CRM1	P30822	1084 aa	Known RBP	4.18	□□□□□ -1.74
HOS3	YPL116W	HXT3	P32466	567 aa	Known RBP	4.18	□□□□□ -1.74
HOS3	YPL116W	SCT1	P32784	759 aa		4.18	□□□□□ -1.74
HOS3	YPL116W	NTH2	P35172	780 aa		4.18	□□□□□ -1.74
HOS3	YPL116W	MRPL37	P36532	105 aa		4.18	□□□□□ -1.74
HOS3	YPL116W	MNL1	P38888	796 aa		4.18	□□□□□ -1.74
HOS3	YPL116W	YER184C	P39961	794 aa		4.18	□□□□□ -1.74
HOS3	YPL116W	UTP25	P40498	721 aa	Known RBP	4.18	□□□□□ -1.74
HOS3	YPL116W	YRB2	P40517	327 aa		4.18	□□□□□ -1.74
HOS3	YPL116W	ARF3	P40994	183 aa	RIP-Chip data	4.18	□□□□□ -1.74	RIP-Chip
HOS3	YPL116W	GPP1	P41277	250 aa	Known RBP	4.18	□□□□□ -1.74
HOS3	YPL116W	RAI1	P53063	387 aa	Known RBP	4.18	□□□□□ -1.74
HOS3	YPL116W	RPN14	P53196	417 aa		4.18	□□□□□ -1.74
HOS3	YPL116W	ALD6	P54115	500 aa	Known RBP	4.18	□□□□□ -1.74
HOS3	YPL116W	MEC3	Q02574	474 aa		4.18	□□□□□ -1.74
HOS3	YPL116W	TIM50	Q02776	476 aa		4.18	□□□□□ -1.74
HOS3	YPL116W	PPM1	Q04081	328 aa		4.18	□□□□□ -1.74
HOS3	YPL116W	UTP5	Q04177	643 aa	Known RBP	4.18	□□□□□ -1.74
HOS3	YPL116W	TRS120	Q04183	1289 aa		4.18	□□□□□ -1.74
HOS3	YPL116W	COA4	Q05809	96 aa		4.18	□□□□□ -1.74
HOS3	YPL116W	ISR1	Q06098	443 aa	Known RBP	4.18	□□□□□ -1.74
HOS3	YPL116W	YDR056C	Q12025	205 aa		4.18	□□□□□ -1.74
HOS3	YPL116W	ATG9	Q12142	997 aa		4.18	□□□□□ -1.74
HOS3	YPL116W	TY3A-G	Q12173	290 aa		4.18	□□□□□ -1.74
HOS3	YPL116W	HMS1	Q12398	434 aa		4.18	□□□□□ -1.74
HOS3	YPL116W	STB3	Q12427	513 aa		4.18	□□□□□ -1.74
HOS3	YPL116W	TY3A-I	Q99219	290 aa		4.18	□□□□□ -1.74
HOS3	YPL116W	CIT1	P00890	479 aa		4.18	□□□□□ -1.74
HOS3	YPL116W	CAR2	P07991	424 aa	Known RBP	4.18	□□□□□ -1.74
HOS3	YPL116W	IMP2'	P32351	346 aa		4.18	□□□□□ -1.74
HOS3	YPL116W	PDB1	P32473	366 aa	Known RBP	4.18	□□□□□ -1.74
HOS3	YPL116W	YUH1	P35127	236 aa		4.18	□□□□□ -1.74
HOS3	YPL116W	MYO3	P36006	1272 aa		4.18	□□□□□ -1.74
HOS3	YPL116W	SRP72	P38688	640 aa	Known RBP	4.18	□□□□□ -1.74
HOS3	YPL116W	RSC30	P38781	883 aa		4.18	□□□□□ -1.74
HOS3	YPL116W	RAD55	P38953	406 aa		4.18	□□□□□ -1.74
HOS3	YPL116W	FLC2	P39719	783 aa		4.18	□□□□□ -1.74
HOS3	YPL116W	BUD16	P39988	312 aa		4.18	□□□□□ -1.74
HOS3	YPL116W	IRC24	P40580	263 aa		4.18	□□□□□ -1.74
HOS3	YPL116W	DUG1	P43616	481 aa	Known RBP	4.18	□□□□□ -1.74
HOS3	YPL116W	YJL007C	P47080	104 aa		4.18	□□□□□ -1.74
HOS3	YPL116W	IMD3	P50095	523 aa	Known RBP	4.18	□□□□□ -1.74
HOS3	YPL116W	ARI1	P53111	347 aa	Known RBP	4.18	□□□□□ -1.74
HOS3	YPL116W	MET14	Q02196	202 aa		4.18	□□□□□ -1.74
HOS3	YPL116W	YML131W	Q03102	365 aa		4.18	□□□□□ -1.74
HOS3	YPL116W	BSC2	Q05611	235 aa		4.18	□□□□□ -1.74
HOS3	YPL116W	ARO10	Q06408	635 aa		4.18	□□□□□ -1.74
HOS3	YPL116W	OMS1	Q06668	471 aa		4.18	□□□□□ -1.74
HOS3	YPL116W	WHI4	Q07655	649 aa	Known RBP	4.18	□□□□□ -1.74
HOS3	YPL116W	RPN8	Q08723	338 aa	Known RBP	4.18	□□□□□ -1.74
HOS3	YPL116W	ARP7	Q12406	477 aa		4.18	□□□□□ -1.74
HOS3	YPL116W	ATG11	Q12527	1178 aa		4.18	□□□□□ -1.74
HOS3	YPL116W	TY2B-LR1	P0C2J3	1770 aa		4.18	□□□□□ -1.74
HOS3	YPL116W	TY2B-F	P0CX63	1770 aa		4.18	□□□□□ -1.74
HOS3	YPL116W	TY2B-GR2	P0CX64	1770 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms