RNA–Protein interactions for RNA: YPL006W

NCR1, Transcript of Vacuolar membrane protein, yeast

Gene NCR1, Length 3,513 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCR1	YPL006W	YHL008C	P38750	627 aa		4.08	□□□□□ -1.76
NCR1	YPL006W	DPH1	P40487	425 aa	Known RBP	4.08	□□□□□ -1.76
NCR1	YPL006W	SAD1	P43589	448 aa		4.08	□□□□□ -1.76
NCR1	YPL006W	RNR4	P49723	345 aa	Known RBP	4.08	□□□□□ -1.76
NCR1	YPL006W	RPM2	Q02773	1202 aa		4.08	□□□□□ -1.76
NCR1	YPL006W	ERP3	Q12403	225 aa		4.08	□□□□□ -1.76
NCR1	YPL006W	PER1	P25625	357 aa		4.08	□□□□□ -1.76
NCR1	YPL006W	RAD14	P28519	371 aa		4.08	□□□□□ -1.76
NCR1	YPL006W	MEI4	P29467	408 aa		4.08	□□□□□ -1.76
NCR1	YPL006W	HES1	P35843	434 aa		4.08	□□□□□ -1.76
NCR1	YPL006W	RIM2	P38127	377 aa		4.08	□□□□□ -1.76
NCR1	YPL006W	CTP1	P38152	299 aa		4.08	□□□□□ -1.76
NCR1	YPL006W	TDA11	P38854	504 aa		4.08	□□□□□ -1.76
NCR1	YPL006W	SAH1	P39954	449 aa	Known RBP	4.08	□□□□□ -1.76
NCR1	YPL006W	HMF1	P40037	129 aa	Known RBP	4.08	□□□□□ -1.76
NCR1	YPL006W	ASG7	P46993	209 aa		4.08	□□□□□ -1.76
NCR1	YPL006W	FMP33	P46998	180 aa		4.08	□□□□□ -1.76
NCR1	YPL006W	MAD3	P47074	515 aa		4.08	□□□□□ -1.76
NCR1	YPL006W	UBP15	P50101	1230 aa		4.08	□□□□□ -1.76
NCR1	YPL006W	TAN1	P53072	289 aa	Predicted RBP	4.08	□□□□□ -1.76
NCR1	YPL006W	CDC55	Q00362	526 aa		4.08	□□□□□ -1.76
NCR1	YPL006W	YDR090C	Q03193	310 aa		4.08	□□□□□ -1.76
NCR1	YPL006W	CUE5	Q08412	411 aa	Known RBP	4.08	□□□□□ -1.76
NCR1	YPL006W	YPR202W	Q08993	238 aa		4.08	□□□□□ -1.76
NCR1	YPL006W	TKL1	P23254	680 aa	Known RBP	4.08	□□□□□ -1.76
NCR1	YPL006W	TSR4	P25040	408 aa		4.08	□□□□□ -1.76
NCR1	YPL006W	YDJ1	P25491	409 aa	Known RBP	4.08	□□□□□ -1.76
NCR1	YPL006W	NUP120	P35729	1037 aa		4.08	□□□□□ -1.76
NCR1	YPL006W	ERP2	P39704	215 aa		4.08	□□□□□ -1.76
NCR1	YPL006W	SCS2	P40075	244 aa	Known RBP	4.08	□□□□□ -1.76
NCR1	YPL006W	CHS6	P40955	746 aa		4.08	□□□□□ -1.76
NCR1	YPL006W	TAF1	P46677	1066 aa		4.08	□□□□□ -1.76
NCR1	YPL006W	HOP2	P53187	214 aa		4.08	□□□□□ -1.76
NCR1	YPL006W	CUL3	P53202	744 aa		4.08	□□□□□ -1.76
NCR1	YPL006W	UTP8	P53276	713 aa	Known RBP	4.08	□□□□□ -1.76
NCR1	YPL006W	IST1	P53843	298 aa	Predicted RBP	4.08	□□□□□ -1.76
NCR1	YPL006W	NMA111	P53920	997 aa		4.08	□□□□□ -1.76
NCR1	YPL006W	GPD1	Q00055	391 aa	Known RBP	4.08	□□□□□ -1.76
NCR1	YPL006W	ECM7	Q06200	448 aa		4.08	□□□□□ -1.76
NCR1	YPL006W	OSW2	Q12202	724 aa		4.08	□□□□□ -1.76
NCR1	YPL006W	NKP1	Q12493	238 aa		4.08	□□□□□ -1.76
NCR1	YPL006W	YEL077C	Q3E7X8	1277 aa		4.08	□□□□□ -1.76
NCR1	YPL006W	MSD1	P15179	658 aa	Known RBP	4.07	□□□□□ -1.76
NCR1	YPL006W	PUT4	P15380	627 aa		4.07	□□□□□ -1.76
NCR1	YPL006W	URA4	P20051	364 aa		4.07	□□□□□ -1.76
NCR1	YPL006W	ADE2	P21264	571 aa	Known RBP	4.07	□□□□□ -1.76
NCR1	YPL006W	MEF1	P25039	761 aa		4.07	□□□□□ -1.76
NCR1	YPL006W	CUE2	P36075	443 aa	Known RBP	4.07	□□□□□ -1.76
NCR1	YPL006W	DBP7	P36120	742 aa	Known RBP	4.07	□□□□□ -1.76
NCR1	YPL006W	TRM5	P38793	499 aa		4.07	□□□□□ -1.76
NCR1	YPL006W	STL1	P39932	569 aa		4.07	□□□□□ -1.76
NCR1	YPL006W	SCC4	P40090	624 aa		4.07	□□□□□ -1.76
NCR1	YPL006W	PEP8	P40335	379 aa		4.07	□□□□□ -1.76
NCR1	YPL006W	HOS4	P40480	1083 aa		4.07	□□□□□ -1.76
NCR1	YPL006W	PXR1	P53335	271 aa	Predicted RBP	4.07	□□□□□ -1.76
NCR1	YPL006W	RSA3	Q05942	220 aa	Known RBP	4.07	□□□□□ -1.76
NCR1	YPL006W	DIA2	Q08496	732 aa	Predicted RBP	4.07	□□□□□ -1.76
NCR1	YPL006W	TAF3	Q12297	353 aa		4.07	□□□□□ -1.76
NCR1	YPL006W	STB3	Q12427	513 aa		4.07	□□□□□ -1.76
NCR1	YPL006W	TAL1	P15019	335 aa	Known RBP	4.07	□□□□□ -1.76
NCR1	YPL006W	DGR2	P32330	852 aa		4.07	□□□□□ -1.76
NCR1	YPL006W	DPH2	P32461	534 aa		4.07	□□□□□ -1.76
NCR1	YPL006W	REG2	P38232	338 aa		4.07	□□□□□ -1.76
NCR1	YPL006W	VPS29	P38759	282 aa		4.07	□□□□□ -1.76
NCR1	YPL006W	YEL025C	P39991	1188 aa		4.07	□□□□□ -1.76
NCR1	YPL006W	EAF5	P39995	279 aa		4.07	□□□□□ -1.76
NCR1	YPL006W	FET4	P40988	552 aa		4.07	□□□□□ -1.76
NCR1	YPL006W	YGL036W	P53185	909 aa	Predicted RBP	4.07	□□□□□ -1.76
NCR1	YPL006W	RTP1	Q12751	981 aa		4.07	□□□□□ -1.76
NCR1	YPL006W	ATP2	P00830	511 aa	Known RBP	4.07	□□□□□ -1.76
NCR1	YPL006W	GFD2	P25370	566 aa	Known RBP	4.07	□□□□□ -1.76
NCR1	YPL006W	HEM3	P28789	327 aa		4.07	□□□□□ -1.76
NCR1	YPL006W	EFT1	P32324	842 aa	Known RBP	4.07	□□□□□ -1.76
NCR1	YPL006W	YMC2	P38087	329 aa		4.07	□□□□□ -1.76
NCR1	YPL006W	APN2	P38207	520 aa		4.07	□□□□□ -1.76
NCR1	YPL006W	GGA2	P38817	585 aa	Known RBP	4.07	□□□□□ -1.76
NCR1	YPL006W	MAM33	P40513	266 aa		4.07	□□□□□ -1.76
NCR1	YPL006W	MRM2	P53123	320 aa		4.07	□□□□□ -1.76
NCR1	YPL006W	MNP1	P53163	194 aa	Predicted RBP	4.07	□□□□□ -1.76
NCR1	YPL006W	NMA2	P53204	395 aa		4.07	□□□□□ -1.76
NCR1	YPL006W	YMR321C	Q04898	105 aa		4.07	□□□□□ -1.76
NCR1	YPL006W	GET4	Q12125	312 aa		4.07	□□□□□ -1.76
NCR1	YPL006W	EMP46	Q12396	444 aa		4.07	□□□□□ -1.76
NCR1	YPL006W	ASP3-2	P0CX77	362 aa		4.06	□□□□□ -1.76
NCR1	YPL006W	ASP3-3	P0CX78	362 aa		4.06	□□□□□ -1.76
NCR1	YPL006W	ASP3-4	P0CX79	362 aa		4.06	□□□□□ -1.76
NCR1	YPL006W	ASP3-1	P0CZ17	362 aa		4.06	□□□□□ -1.76
NCR1	YPL006W	SEC1	P30619	724 aa	Known RBP	4.06	□□□□□ -1.76
NCR1	YPL006W	HXT3	P32466	567 aa	Known RBP	4.06	□□□□□ -1.76
NCR1	YPL006W	SLA2	P33338	968 aa		4.06	□□□□□ -1.76
NCR1	YPL006W	ECM4	P36156	370 aa		4.06	□□□□□ -1.76
NCR1	YPL006W	YBL036C	P38197	257 aa		4.06	□□□□□ -1.76
NCR1	YPL006W	DIA4	P38705	446 aa	Predicted RBP	4.06	□□□□□ -1.76
NCR1	YPL006W	YIL054W	P40524	105 aa		4.06	□□□□□ -1.76
NCR1	YPL006W	YFL012W	P43580	148 aa		4.06	□□□□□ -1.76
NCR1	YPL006W	RTA1	P53047	317 aa		4.06	□□□□□ -1.76
NCR1	YPL006W	RCF2	P53721	224 aa		4.06	□□□□□ -1.76
NCR1	YPL006W	ELP3	Q02908	557 aa	Known RBP	4.06	□□□□□ -1.76
NCR1	YPL006W	TVP15	Q03860	143 aa		4.06	□□□□□ -1.76
NCR1	YPL006W	SND1	Q04007	877 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 92.5 ms