RNA–Protein interactions for RNA: YOR005C

DNL4, Transcript of DNA ligase required for nonhomologous end-joining (NHEJ), yeastyeast

Gene DNL4, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNL4YOR005C AKL1P38080 1108 aaKnown RBP2.85□□□□□ -1.95
DNL4YOR005C ALG14P38242 237 aa2.85□□□□□ -1.95
DNL4YOR005C CEM1P39525 442 aa2.85□□□□□ -1.95
DNL4YOR005C SSP120P39931 234 aaKnown RBP2.85□□□□□ -1.95
DNL4YOR005C VHR1P40522 640 aa2.85□□□□□ -1.95
DNL4YOR005C MAD2P40958 196 aa2.85□□□□□ -1.95
DNL4YOR005C IRC6P43615 237 aa2.85□□□□□ -1.95
DNL4YOR005C CCT8P47079 568 aaKnown RBP2.85□□□□□ -1.95
DNL4YOR005C RRT6P53117 311 aaPredicted RBP2.85□□□□□ -1.95
DNL4YOR005C RBG2P53295 368 aaKnown RBP2.85□□□□□ -1.95
DNL4YOR005C GPD1Q00055 391 aaKnown RBP2.85□□□□□ -1.95
DNL4YOR005C SDH1Q00711 640 aa2.85□□□□□ -1.95
DNL4YOR005C LEE1Q02799 301 aaKnown RBP2.85□□□□□ -1.95
DNL4YOR005C TAF11Q04226 346 aa2.85□□□□□ -1.95
DNL4YOR005C TDA9Q04545 1251 aa2.85□□□□□ -1.95
DNL4YOR005C YLR352WQ06479 807 aa2.85□□□□□ -1.95
DNL4YOR005C TRM8Q12009 286 aa2.85□□□□□ -1.95
DNL4YOR005C RTK1Q12100 620 aaPredicted RBP2.85□□□□□ -1.95
DNL4YOR005C GPM1P00950 247 aaKnown RBP2.85□□□□□ -1.95
DNL4YOR005C LEU2P04173 364 aaPredicted RBP2.85□□□□□ -1.95
DNL4YOR005C VAS1P07806 1104 aaKnown RBP2.85□□□□□ -1.95
DNL4YOR005C YEL076C-AP0CX16 216 aa2.85□□□□□ -1.95
DNL4YOR005C YLR464WP0CX17 216 aa2.85□□□□□ -1.95
DNL4YOR005C SAM35P14693 329 aa2.85□□□□□ -1.95
DNL4YOR005C ACO1P19414 778 aaKnown RBP RIP-Chip data2.85□□□□□ -1.95not detected
DNL4YOR005C ADP1P25371 1049 aa2.85□□□□□ -1.95
DNL4YOR005C MUM2P38236 366 aa2.85□□□□□ -1.95
DNL4YOR005C UBS1P38290 277 aa2.85□□□□□ -1.95
DNL4YOR005C MIP6P38760 659 aaKnown RBP2.85□□□□□ -1.95
DNL4YOR005C YEL076CP39971 216 aa2.85□□□□□ -1.95
DNL4YOR005C CTF18P49956 741 aa2.85□□□□□ -1.95
DNL4YOR005C MEH1Q02205 184 aa2.85□□□□□ -1.95
DNL4YOR005C EAR1Q03212 550 aa2.85□□□□□ -1.95
DNL4YOR005C SIR4P11978 1358 aa2.85□□□□□ -1.95
DNL4YOR005C RPS17AP02407 136 aaKnown RBP2.84□□□□□ -1.95
DNL4YOR005C FBP1P09201 348 aa2.84□□□□□ -1.95
DNL4YOR005C RPS17BP14127 136 aaKnown RBP2.84□□□□□ -1.95
DNL4YOR005C GUK1P15454 187 aaKnown RBP2.84□□□□□ -1.95
DNL4YOR005C SPO16P17122 198 aa2.84□□□□□ -1.95
DNL4YOR005C DGR2P32330 852 aa2.84□□□□□ -1.95
DNL4YOR005C CBF2P32504 956 aa2.84□□□□□ -1.95
DNL4YOR005C VMA8P32610 256 aaKnown RBP2.84□□□□□ -1.95
DNL4YOR005C NPL6P32832 435 aa2.84□□□□□ -1.95
DNL4YOR005C MDL2P33311 773 aa2.84□□□□□ -1.95
DNL4YOR005C STT3P39007 718 aaKnown RBP2.84□□□□□ -1.95
DNL4YOR005C YEL068CP39977 110 aa2.84□□□□□ -1.95
DNL4YOR005C RAI1P53063 387 aaKnown RBP2.84□□□□□ -1.95
DNL4YOR005C YKU80Q04437 629 aa2.84□□□□□ -1.95
DNL4YOR005C MCH5Q08777 521 aa2.84□□□□□ -1.95
DNL4YOR005C DIN7Q12086 430 aa2.84□□□□□ -1.95
DNL4YOR005C SEC7P11075 2009 aaKnown RBP2.84□□□□□ -1.95
DNL4YOR005C KRE5P22023 1365 aa2.84□□□□□ -1.95
DNL4YOR005C RPS4AP0CX35 261 aaKnown RBP2.84□□□□□ -1.95
DNL4YOR005C RPS4BP0CX36 261 aaKnown RBP2.84□□□□□ -1.95
DNL4YOR005C SRO9P25567 434 aaKnown RBP2.84□□□□□ -1.95
DNL4YOR005C RPD3P32561 433 aa2.84□□□□□ -1.95
DNL4YOR005C RPT3P33298 428 aaKnown RBP2.84□□□□□ -1.95
DNL4YOR005C PEX5P35056 612 aa2.84□□□□□ -1.95
DNL4YOR005C YKR075CP36155 307 aa2.84□□□□□ -1.95
DNL4YOR005C POA1P38218 177 aa2.84□□□□□ -1.95
DNL4YOR005C APE4P38821 490 aa2.84□□□□□ -1.95
DNL4YOR005C YER010CP40011 234 aa2.84□□□□□ -1.95
DNL4YOR005C DJP1P40564 432 aa2.84□□□□□ -1.95
DNL4YOR005C PIL1P53252 339 aaKnown RBP2.84□□□□□ -1.95
DNL4YOR005C DUS1P53759 423 aaKnown RBP2.84□□□□□ -1.95
DNL4YOR005C YLR287CQ05881 355 aa2.84□□□□□ -1.95
DNL4YOR005C SVS1Q12254 260 aa2.84□□□□□ -1.95
DNL4YOR005C NUP192P47054 1683 aa2.84□□□□□ -1.96
DNL4YOR005C NUP188P52593 1655 aaKnown RBP2.84□□□□□ -1.96
DNL4YOR005C PHO5P00635 467 aa2.83□□□□□ -1.96
DNL4YOR005C FUM1P08417 488 aaKnown RBP2.83□□□□□ -1.96
DNL4YOR005C CDC16P09798 840 aa2.83□□□□□ -1.96
DNL4YOR005C CBP3P21560 335 aa2.83□□□□□ -1.96
DNL4YOR005C YBR138CP38277 524 aa2.83□□□□□ -1.96
DNL4YOR005C IFA38P38286 347 aa2.83□□□□□ -1.96
DNL4YOR005C TPA1P40032 644 aaKnown RBP2.83□□□□□ -1.96
DNL4YOR005C GPD2P41911 440 aaKnown RBP2.83□□□□□ -1.96
DNL4YOR005C MPP10P47083 593 aaKnown RBP2.83□□□□□ -1.96
DNL4YOR005C ENP2P48234 707 aaKnown RBP2.83□□□□□ -1.96
DNL4YOR005C MRPL19P53875 158 aa2.83□□□□□ -1.96
DNL4YOR005C YPS7Q06325 596 aa2.83□□□□□ -1.96
DNL4YOR005C TAH18Q12181 623 aa2.83□□□□□ -1.96
DNL4YOR005C TY1A-NL1Q12391 440 aaKnown RBP2.83□□□□□ -1.96
DNL4YOR005C HSH49Q99181 213 aaPredicted RBP2.83□□□□□ -1.96
DNL4YOR005C SIR1P21691 654 aa2.83□□□□□ -1.96
DNL4YOR005C IMG2P25642 146 aaPredicted RBP2.83□□□□□ -1.96
DNL4YOR005C RAD16P31244 790 aa2.83□□□□□ -1.96
DNL4YOR005C ECM32P32644 1121 aaKnown RBP2.83□□□□□ -1.96
DNL4YOR005C YLF2P38746 405 aa2.83□□□□□ -1.96
DNL4YOR005C RTR1P40084 226 aaPredicted RBP2.83□□□□□ -1.96
DNL4YOR005C CBK1P53894 756 aa2.83□□□□□ -1.96
DNL4YOR005C TIM10P87108 93 aa2.83□□□□□ -1.96
DNL4YOR005C RCF1Q03713 159 aa2.83□□□□□ -1.96
DNL4YOR005C SSL1Q04673 461 aaPredicted RBP2.83□□□□□ -1.96
DNL4YOR005C TRI1Q05024 226 aa2.83□□□□□ -1.96
DNL4YOR005C STP4Q07351 490 aa2.83□□□□□ -1.96
DNL4YOR005C IWR1Q07532 353 aaPredicted RBP2.83□□□□□ -1.96
DNL4YOR005C PSK2Q08217 1101 aa2.83□□□□□ -1.96
DNL4YOR005C NHA1Q99271 985 aa2.83□□□□□ -1.96
DNL4YOR005C DAL5P15365 543 aa2.83□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 34.2 ms