RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C PFK26P40433 827 aaKnown RBP8.93□□□□□ -0.98
RPD3YNL330C PRK1P40494 810 aa8.93□□□□□ -0.98
RPD3YNL330C TFG1P41895 735 aaPredicted RBP8.93□□□□□ -0.98
RPD3YNL330C FMN1Q03778 218 aa8.93□□□□□ -0.98
RPD3YNL330C CIR2Q08822 631 aa8.93□□□□□ -0.98
RPD3YNL330C HFI1Q12060 488 aa8.93□□□□□ -0.98
RPD3YNL330C PCD1Q12524 340 aa8.93□□□□□ -0.98
RPD3YNL330C YLR278CQ05854 1341 aa8.93□□□□□ -0.98
RPD3YNL330C IMA3P0CW40 589 aa8.92□□□□□ -0.98
RPD3YNL330C IMA4P0CW41 589 aa8.92□□□□□ -0.98
RPD3YNL330C EXO70P19658 623 aa8.92□□□□□ -0.98
RPD3YNL330C ZUO1P32527 433 aaKnown RBP8.92□□□□□ -0.98
RPD3YNL330C SEC6P32844 805 aa8.92□□□□□ -0.98
RPD3YNL330C MRP4P32902 394 aa8.92□□□□□ -0.98
RPD3YNL330C CBF5P33322 483 aaKnown RBP RIP-Chip data8.92□□□□□ -0.98not detected
RPD3YNL330C NOP4P37838 685 aaKnown RBP8.92□□□□□ -0.98
RPD3YNL330C JJJ3P47138 172 aa8.92□□□□□ -0.98
RPD3YNL330C PAN2P53010 1115 aaPredicted RBP8.92□□□□□ -0.98
RPD3YNL330C MND1P53102 219 aa8.92□□□□□ -0.98
RPD3YNL330C YGL036WP53185 909 aaPredicted RBP8.92□□□□□ -0.98
RPD3YNL330C BIO4P53630 237 aa8.92□□□□□ -0.98
RPD3YNL330C CDC55Q00362 526 aa8.92□□□□□ -0.98
RPD3YNL330C SLT2Q00772 484 aa8.92□□□□□ -0.98
RPD3YNL330C SPO19Q03029 223 aa8.92□□□□□ -0.98
RPD3YNL330C AIM39Q08223 395 aa8.92□□□□□ -0.98
RPD3YNL330C IMA2Q08295 589 aa8.92□□□□□ -0.98
RPD3YNL330C KEX2P13134 814 aa8.91□□□□□ -0.98
RPD3YNL330C PKC1P24583 1151 aa8.91□□□□□ -0.98
RPD3YNL330C MLS1P30952 554 aa8.91□□□□□ -0.98
RPD3YNL330C IXR1P33417 597 aa8.91□□□□□ -0.98
RPD3YNL330C DBP7P36120 742 aaKnown RBP8.91□□□□□ -0.98
RPD3YNL330C GUA1P38625 525 aaKnown RBP8.91□□□□□ -0.98
RPD3YNL330C PPX1P38698 397 aa8.91□□□□□ -0.98
RPD3YNL330C ERP2P39704 215 aa8.91□□□□□ -0.98
RPD3YNL330C JEM1P40358 645 aa8.91□□□□□ -0.98
RPD3YNL330C NET1P47035 1189 aa8.91□□□□□ -0.98
RPD3YNL330C ACF4P47129 309 aa8.91□□□□□ -0.98
RPD3YNL330C RNR4P49723 345 aaKnown RBP8.91□□□□□ -0.98
RPD3YNL330C PSP2P50109 593 aaKnown RBP8.91□□□□□ -0.98
RPD3YNL330C MNP1P53163 194 aaPredicted RBP8.91□□□□□ -0.98
RPD3YNL330C YLR455WQ06188 304 aa8.91□□□□□ -0.98
RPD3YNL330C YET3Q07451 203 aa8.91□□□□□ -0.98
RPD3YNL330C OCA6Q12454 224 aa8.91□□□□□ -0.98
RPD3YNL330C MCM5P29496 775 aaKnown RBP8.9□□□□□ -0.98
RPD3YNL330C CKB2P38930 258 aa8.9□□□□□ -0.98
RPD3YNL330C YIL054WP40524 105 aa8.9□□□□□ -0.98
RPD3YNL330C RLP7P40693 322 aaKnown RBP8.9□□□□□ -0.98
RPD3YNL330C YJL107CP42947 387 aa8.9□□□□□ -0.98
RPD3YNL330C ALY2P47029 1046 aa8.9□□□□□ -0.98
RPD3YNL330C ZAP1P47043 880 aa8.9□□□□□ -0.98
RPD3YNL330C RPS7BP48164 190 aaKnown RBP8.9□□□□□ -0.98
RPD3YNL330C MIG2P53035 382 aa8.9□□□□□ -0.98
RPD3YNL330C USE1P53146 245 aa8.9□□□□□ -0.98
RPD3YNL330C ATP25Q03153 612 aa8.9□□□□□ -0.98
RPD3YNL330C ADY3Q07732 790 aa8.9□□□□□ -0.98
RPD3YNL330C YRR1Q12172 810 aa8.9□□□□□ -0.98
RPD3YNL330C NOT5Q12514 560 aaPredicted RBP8.9□□□□□ -0.98
RPD3YNL330C GPA2P10823 449 aa8.89□□□□□ -0.99
RPD3YNL330C NPP1P25353 742 aa8.89□□□□□ -0.99
RPD3YNL330C SPS22P25380 463 aa8.89□□□□□ -0.99
RPD3YNL330C DIA4P38705 446 aaPredicted RBP8.89□□□□□ -0.99
RPD3YNL330C STN1P38960 494 aa8.89□□□□□ -0.99
RPD3YNL330C PEA2P40091 420 aa8.89□□□□□ -0.99
RPD3YNL330C GVP36P40531 326 aaKnown RBP8.89□□□□□ -0.99
RPD3YNL330C COS6P53344 381 aa8.89□□□□□ -0.99
RPD3YNL330C CWC15Q03772 175 aaKnown RBP8.89□□□□□ -0.99
RPD3YNL330C BUD22Q04347 519 aaKnown RBP8.89□□□□□ -0.99
RPD3YNL330C CUE5Q08412 411 aaKnown RBP8.89□□□□□ -0.99
RPD3YNL330C CFT2Q12102 859 aaPredicted RBP8.89□□□□□ -0.99
RPD3YNL330C YLL056CQ12177 298 aa8.89□□□□□ -0.99
RPD3YNL330C EMP46Q12396 444 aa8.89□□□□□ -0.99
RPD3YNL330C TRM11Q12463 433 aa8.89□□□□□ -0.99
RPD3YNL330C VPS5Q92331 675 aa8.89□□□□□ -0.99
RPD3YNL330C TEF1P02994 458 aaKnown RBP8.88□□□□□ -0.99
RPD3YNL330C YPK1P12688 680 aaKnown RBP8.88□□□□□ -0.99
RPD3YNL330C CDC20P26309 610 aa8.88□□□□□ -0.99
RPD3YNL330C YBL036CP38197 257 aa8.88□□□□□ -0.99
RPD3YNL330C FRT2P39734 528 aa8.88□□□□□ -0.99
RPD3YNL330C SSP120P39931 234 aaKnown RBP8.88□□□□□ -0.99
RPD3YNL330C FAR3P46671 204 aa8.88□□□□□ -0.99
RPD3YNL330C TAF1P46677 1066 aa8.88□□□□□ -0.99
RPD3YNL330C ALT1P52893 592 aa8.88□□□□□ -0.99
RPD3YNL330C TPO2P53283 614 aa8.88□□□□□ -0.99
RPD3YNL330C RCF2P53721 224 aa8.88□□□□□ -0.99
RPD3YNL330C BET4Q00618 327 aa8.88□□□□□ -0.99
RPD3YNL330C ARO80Q04052 950 aa8.88□□□□□ -0.99
RPD3YNL330C YMR321CQ04898 105 aa8.88□□□□□ -0.99
RPD3YNL330C FMP25Q08023 583 aa8.88□□□□□ -0.99
RPD3YNL330C SLP1Q12232 587 aa8.88□□□□□ -0.99
RPD3YNL330C RPL24AP04449 155 aaKnown RBP8.87□□□□□ -0.99
RPD3YNL330C RPL4AP10664 362 aaKnown RBP8.87□□□□□ -0.99
RPD3YNL330C YCR015CP25616 317 aa8.87□□□□□ -0.99
RPD3YNL330C YHL008CP38750 627 aa8.87□□□□□ -0.99
RPD3YNL330C TAH11P47112 604 aa8.87□□□□□ -0.99
RPD3YNL330C RPL4BP49626 362 aaKnown RBP8.87□□□□□ -0.99
RPD3YNL330C NUT1P53114 1132 aa8.87□□□□□ -0.99
RPD3YNL330C RRT6P53117 311 aaPredicted RBP8.87□□□□□ -0.99
RPD3YNL330C MRM2P53123 320 aa8.87□□□□□ -0.99
RPD3YNL330C HMO1Q03973 246 aaKnown RBP8.87□□□□□ -0.99
RPD3YNL330C RUP1Q12242 671 aa8.87□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms