RNA–Protein interactions for RNA: YMR107W

SPG4, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG4, Length 348 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG4YMR107W RSC30P38781 883 aa5.51□□□□□ -1.53
SPG4YMR107W NBP1P52919 319 aaPredicted RBP5.51□□□□□ -1.53
SPG4YMR107W UBX4P54730 416 aa5.51□□□□□ -1.53
SPG4YMR107W YMR018WQ04364 514 aa5.51□□□□□ -1.53
SPG4YMR107W MGR3Q04472 501 aa5.51□□□□□ -1.53
SPG4YMR107W COA4Q05809 96 aa5.51□□□□□ -1.53
SPG4YMR107W YPR078CQ06813 372 aa5.51□□□□□ -1.53
SPG4YMR107W OXR1Q08952 273 aa5.51□□□□□ -1.53
SPG4YMR107W YPR202WQ08993 238 aa5.51□□□□□ -1.53
SPG4YMR107W RCN2Q12044 265 aa5.51□□□□□ -1.53
SPG4YMR107W IES3Q12345 250 aa5.51□□□□□ -1.53
SPG4YMR107W AI5_ALPHAQ9ZZX1 630 aa5.51□□□□□ -1.53
SPG4YMR107W RIM15P43565 1770 aa5.5□□□□□ -1.53
SPG4YMR107W TUF1P02992 437 aaKnown RBP5.5□□□□□ -1.53
SPG4YMR107W SCP160P06105 1222 aaKnown RBP RIP-Chip data5.5□□□□□ -1.53not detected
SPG4YMR107W COR1P07256 457 aa5.5□□□□□ -1.53
SPG4YMR107W KIN2P13186 1147 aaKnown RBP5.5□□□□□ -1.53
SPG4YMR107W SEC63P14906 663 aa5.5□□□□□ -1.53
SPG4YMR107W MSD1P15179 658 aaKnown RBP5.5□□□□□ -1.53
SPG4YMR107W SAN1P22470 610 aa5.5□□□□□ -1.53
SPG4YMR107W UBA1P22515 1024 aaKnown RBP5.5□□□□□ -1.53
SPG4YMR107W GFD2P25370 566 aaKnown RBP5.5□□□□□ -1.53
SPG4YMR107W PRP45P28004 379 aaPredicted RBP5.5□□□□□ -1.53
SPG4YMR107W RAD14P28519 371 aa5.5□□□□□ -1.53
SPG4YMR107W CLG1P35190 452 aa5.5□□□□□ -1.53
SPG4YMR107W TPO5P36029 618 aa5.5□□□□□ -1.53
SPG4YMR107W YKL023WP36103 277 aaKnown RBP5.5□□□□□ -1.53
SPG4YMR107W PGM2P37012 569 aaKnown RBP5.5□□□□□ -1.53
SPG4YMR107W GEF1P37020 779 aa5.5□□□□□ -1.53
SPG4YMR107W CTP1P38152 299 aa5.5□□□□□ -1.53
SPG4YMR107W FES1P38260 290 aa5.5□□□□□ -1.53
SPG4YMR107W TIF5P38431 405 aaKnown RBP5.5□□□□□ -1.53
SPG4YMR107W YHL008CP38750 627 aa5.5□□□□□ -1.53
SPG4YMR107W VMA22P38784 181 aa5.5□□□□□ -1.53
SPG4YMR107W TRM5P38793 499 aa5.5□□□□□ -1.53
SPG4YMR107W YDR089WP38966 869 aa5.5□□□□□ -1.53
SPG4YMR107W STL1P39932 569 aa5.5□□□□□ -1.53
SPG4YMR107W DSE1P40077 573 aa5.5□□□□□ -1.53
SPG4YMR107W YGL176CP46945 554 aa5.5□□□□□ -1.53
SPG4YMR107W YJL045WP47052 634 aa5.5□□□□□ -1.53
SPG4YMR107W YJR054WP47114 497 aa5.5□□□□□ -1.53
SPG4YMR107W YBP2P53169 641 aa5.5□□□□□ -1.53
SPG4YMR107W NSG2P53898 299 aa5.5□□□□□ -1.53
SPG4YMR107W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.5□□□□□ -1.53not detected
SPG4YMR107W CIK1Q01649 594 aa5.5□□□□□ -1.53
SPG4YMR107W INM2Q05533 292 aa5.5□□□□□ -1.53
SPG4YMR107W TRE1Q08919 783 aa5.5□□□□□ -1.53
SPG4YMR107W YIG1Q08956 461 aa5.5□□□□□ -1.53
SPG4YMR107W RAD59Q12223 238 aa5.5□□□□□ -1.53
SPG4YMR107W HAT1Q12341 374 aa5.5□□□□□ -1.53
SPG4YMR107W BBP1Q12365 385 aa5.5□□□□□ -1.53
SPG4YMR107W YLR278CQ05854 1341 aa5.49□□□□□ -1.53
SPG4YMR107W SEM1O94742 89 aa5.49□□□□□ -1.53
SPG4YMR107W REP1P03871 373 aa5.49□□□□□ -1.53
SPG4YMR107W HIS3P06633 220 aa5.49□□□□□ -1.53
SPG4YMR107W RSR1P13856 272 aa5.49□□□□□ -1.53
SPG4YMR107W EST1P17214 699 aaPredicted RBP5.49□□□□□ -1.53
SPG4YMR107W CLB2P24869 491 aa5.49□□□□□ -1.53
SPG4YMR107W HEM12P32347 362 aaPredicted RBP5.49□□□□□ -1.53
SPG4YMR107W TFC4P33339 1025 aa5.49□□□□□ -1.53
SPG4YMR107W YEL1P34225 687 aa5.49□□□□□ -1.53
SPG4YMR107W NUP120P35729 1037 aa5.49□□□□□ -1.53
SPG4YMR107W CCT3P39077 534 aaKnown RBP5.49□□□□□ -1.53
SPG4YMR107W INP51P40559 946 aaKnown RBP5.49□□□□□ -1.53
SPG4YMR107W MKT1P40850 830 aaKnown RBP5.49□□□□□ -1.53
SPG4YMR107W SET2P46995 733 aaKnown RBP5.49□□□□□ -1.53
SPG4YMR107W NOP9P47077 666 aaKnown RBP5.49□□□□□ -1.53
SPG4YMR107W LIA1P47120 325 aaKnown RBP5.49□□□□□ -1.53
SPG4YMR107W YGR016WP53209 190 aa5.49□□□□□ -1.53
SPG4YMR107W UTP8P53276 713 aaKnown RBP5.49□□□□□ -1.53
SPG4YMR107W COP1P53622 1201 aaKnown RBP5.49□□□□□ -1.53
SPG4YMR107W TMA20P89886 181 aaPredicted RBP5.49□□□□□ -1.53
SPG4YMR107W PKH1Q03407 766 aa5.49□□□□□ -1.53
SPG4YMR107W CLU1Q03690 1277 aaKnown RBP5.49□□□□□ -1.53
SPG4YMR107W HED1Q03937 162 aa5.49□□□□□ -1.53
SPG4YMR107W BUD22Q04347 519 aaKnown RBP5.49□□□□□ -1.53
SPG4YMR107W YDR222WQ04925 415 aa5.49□□□□□ -1.53
SPG4YMR107W FUS2Q05670 677 aa5.49□□□□□ -1.53
SPG4YMR107W YLR297WQ05899 129 aa5.49□□□□□ -1.53
SPG4YMR107W MCM21Q06675 368 aa5.49□□□□□ -1.53
SPG4YMR107W BUG1Q12191 341 aa5.49□□□□□ -1.53
SPG4YMR107W NTO1Q12311 748 aa5.49□□□□□ -1.53
SPG4YMR107W BI2P03873 423 aa5.48□□□□□ -1.53
SPG4YMR107W HMG2P12684 1045 aa5.48□□□□□ -1.53
SPG4YMR107W RIT1P23796 513 aa5.48□□□□□ -1.53
SPG4YMR107W DGR2P32330 852 aa5.48□□□□□ -1.53
SPG4YMR107W TFC1P32367 649 aa5.48□□□□□ -1.53
SPG4YMR107W DUG2P38149 878 aa5.48□□□□□ -1.53
SPG4YMR107W NCL1P38205 684 aaKnown RBP5.48□□□□□ -1.53
SPG4YMR107W MPT5P39016 859 aaKnown RBP RIP-Chip data5.48□□□□□ -1.53not detected
SPG4YMR107W PCF11P39081 626 aaPredicted RBP5.48□□□□□ -1.53
SPG4YMR107W YHB1P39676 399 aaKnown RBP5.48□□□□□ -1.53
SPG4YMR107W SNL1P40548 159 aa5.48□□□□□ -1.53
SPG4YMR107W AIM21P40563 679 aa5.48□□□□□ -1.53
SPG4YMR107W LCB2P40970 561 aa5.48□□□□□ -1.53
SPG4YMR107W EMP47P43555 445 aa5.48□□□□□ -1.53
SPG4YMR107W FMP32P43557 207 aa5.48□□□□□ -1.53
SPG4YMR107W JJJ2P46997 583 aa5.48□□□□□ -1.53
SPG4YMR107W YJL055WP47044 245 aa5.48□□□□□ -1.53
SPG4YMR107W ASE1P50275 885 aa5.48□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms