RNA–Protein interactions for RNA: YMR047C

NUP116, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP116, Length 3,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP116YMR047C XDJ1P39102 459 aa5.11□□□□□ -1.59
NUP116YMR047C MET18P40469 1032 aa5.11□□□□□ -1.59
NUP116YMR047C ULP2P40537 1034 aaPredicted RBP5.11□□□□□ -1.59
NUP116YMR047C GYP8P43570 497 aa5.11□□□□□ -1.59
NUP116YMR047C PRP31P49704 494 aaPredicted RBP5.11□□□□□ -1.59
NUP116YMR047C YGL081WP53156 320 aa5.11□□□□□ -1.59
NUP116YMR047C PUS2P53167 370 aa5.11□□□□□ -1.59
NUP116YMR047C HOP2P53187 214 aa5.11□□□□□ -1.59
NUP116YMR047C SFB2P53953 876 aa5.11□□□□□ -1.59
NUP116YMR047C ERB1Q04660 807 aaKnown RBP5.11□□□□□ -1.59
NUP116YMR047C FAL1Q12099 399 aaKnown RBP5.11□□□□□ -1.59
NUP116YMR047C ILS1P09436 1072 aaKnown RBP5.11□□□□□ -1.59
NUP116YMR047C RGR1P19263 1082 aa5.11□□□□□ -1.59
NUP116YMR047C FPR1P20081 114 aaKnown RBP5.11□□□□□ -1.59
NUP116YMR047C TKL2P33315 681 aa5.11□□□□□ -1.59
NUP116YMR047C MNR2P35724 969 aa5.11□□□□□ -1.59
NUP116YMR047C RPC37P36121 282 aa5.11□□□□□ -1.59
NUP116YMR047C CCT5P40413 562 aaKnown RBP5.11□□□□□ -1.59
NUP116YMR047C ECL1P48235 211 aa5.11□□□□□ -1.59
NUP116YMR047C RPN4Q03465 531 aa5.11□□□□□ -1.59
NUP116YMR047C AIM32Q04689 311 aa5.11□□□□□ -1.59
NUP116YMR047C YPR027CQ12079 277 aa5.11□□□□□ -1.59
NUP116YMR047C PPZ1P26570 692 aa5.1□□□□□ -1.59
NUP116YMR047C PTC3P34221 468 aaKnown RBP5.1□□□□□ -1.59
NUP116YMR047C YJR054WP47114 497 aa5.1□□□□□ -1.59
NUP116YMR047C YNL108CP53929 270 aa5.1□□□□□ -1.59
NUP116YMR047C VTI1Q04338 217 aa5.1□□□□□ -1.59
NUP116YMR047C BSP1Q06604 576 aa5.1□□□□□ -1.59
NUP116YMR047C YOL036WQ08206 761 aa5.1□□□□□ -1.59
NUP116YMR047C PDH1Q12428 516 aaKnown RBP5.1□□□□□ -1.59
NUP116YMR047C RRP36Q12481 300 aaPredicted RBP5.1□□□□□ -1.59
NUP116YMR047C HIS3P06633 220 aa5.1□□□□□ -1.59
NUP116YMR047C REV1P12689 985 aa5.1□□□□□ -1.59
NUP116YMR047C EST1P17214 699 aaPredicted RBP5.1□□□□□ -1.59
NUP116YMR047C HIR2P32480 875 aa5.1□□□□□ -1.59
NUP116YMR047C NOP4P37838 685 aaKnown RBP5.1□□□□□ -1.59
NUP116YMR047C ATG12P38316 186 aa5.1□□□□□ -1.59
NUP116YMR047C SRP1Q02821 542 aaKnown RBP5.1□□□□□ -1.59
NUP116YMR047C YDR090CQ03193 310 aa5.1□□□□□ -1.59
NUP116YMR047C ADE4P04046 510 aaKnown RBP5.1□□□□□ -1.59
NUP116YMR047C SPE1P08432 466 aa5.1□□□□□ -1.59
NUP116YMR047C PUP3P25451 205 aaKnown RBP5.1□□□□□ -1.59
NUP116YMR047C EFB1P32471 206 aaKnown RBP5.1□□□□□ -1.59
NUP116YMR047C PTR2P32901 601 aa5.1□□□□□ -1.59
NUP116YMR047C ECM13P38195 257 aa5.1□□□□□ -1.59
NUP116YMR047C SHQ1P40486 507 aaPredicted RBP5.1□□□□□ -1.59
NUP116YMR047C IML2P47031 731 aa5.1□□□□□ -1.59
NUP116YMR047C VTC4P47075 721 aa5.1□□□□□ -1.59
NUP116YMR047C SHS1Q07657 551 aa5.1□□□□□ -1.59
NUP116YMR047C GPM2Q12008 311 aa5.1□□□□□ -1.59
NUP116YMR047C ZPS1Q12512 249 aa5.1□□□□□ -1.59
NUP116YMR047C AI5_BETAQ9ZZX0 354 aa5.1□□□□□ -1.59
NUP116YMR047C SCP160P06105 1222 aaKnown RBP RIP-Chip data5.09□□□□□ -1.59 RIP-Chip
NUP116YMR047C HCM1P25364 564 aa5.09□□□□□ -1.59
NUP116YMR047C MSH1P25846 959 aa5.09□□□□□ -1.59
NUP116YMR047C PLC1P32383 869 aa5.09□□□□□ -1.59
NUP116YMR047C TYE7P33122 291 aaPredicted RBP5.09□□□□□ -1.59
NUP116YMR047C FMO1P38866 432 aa5.09□□□□□ -1.59
NUP116YMR047C SPC72P39723 622 aa5.09□□□□□ -1.59
NUP116YMR047C CIR1P42940 261 aa5.09□□□□□ -1.59
NUP116YMR047C IES1P43579 692 aa5.09□□□□□ -1.59
NUP116YMR047C AIP1P46680 615 aaKnown RBP5.09□□□□□ -1.59
NUP116YMR047C KEL2P50090 882 aa5.09□□□□□ -1.59
NUP116YMR047C SNZ1Q03148 297 aa5.09□□□□□ -1.59
NUP116YMR047C HMI1Q12039 706 aa5.09□□□□□ -1.59
NUP116YMR047C NCR1Q12200 1170 aa5.09□□□□□ -1.59
NUP116YMR047C PRR1P28708 518 aa5.09□□□□□ -1.59
NUP116YMR047C ALT1P52893 592 aa5.09□□□□□ -1.59
NUP116YMR047C MZM1Q03429 123 aaPredicted RBP5.09□□□□□ -1.59
NUP116YMR047C PML39Q03760 334 aa5.09□□□□□ -1.59
NUP116YMR047C RNH1Q04740 348 aa5.09□□□□□ -1.59
NUP116YMR047C CLB3P24870 427 aa5.08□□□□□ -1.6
NUP116YMR047C KIP1P28742 1111 aa5.08□□□□□ -1.6
NUP116YMR047C YEL043WP32618 956 aa5.08□□□□□ -1.6
NUP116YMR047C PIN4P34217 668 aaKnown RBP RIP-Chip data5.08□□□□□ -1.6not detected
NUP116YMR047C TMN3P40071 706 aa5.08□□□□□ -1.6
NUP116YMR047C YIR016WP40572 265 aa5.08□□□□□ -1.6
NUP116YMR047C MAF1P41910 395 aa5.08□□□□□ -1.6
NUP116YMR047C FAA4P47912 694 aaKnown RBP5.08□□□□□ -1.6
NUP116YMR047C ORM1P53224 222 aa5.08□□□□□ -1.6
NUP116YMR047C YLR297WQ05899 129 aa5.08□□□□□ -1.6
NUP116YMR047C IWR1Q07532 353 aaPredicted RBP5.08□□□□□ -1.6
NUP116YMR047C LCB4Q12246 624 aa5.08□□□□□ -1.6
NUP116YMR047C CHS1P08004 1131 aa5.08□□□□□ -1.6
NUP116YMR047C APN1P22936 367 aa5.08□□□□□ -1.6
NUP116YMR047C TPS2P31688 896 aaKnown RBP5.08□□□□□ -1.6
NUP116YMR047C BLI1P35727 113 aa5.08□□□□□ -1.6
NUP116YMR047C NUP120P35729 1037 aa5.08□□□□□ -1.6
NUP116YMR047C TIF5P38431 405 aaKnown RBP5.08□□□□□ -1.6
NUP116YMR047C IRR1P40541 1150 aa5.08□□□□□ -1.6
NUP116YMR047C UTP14Q04500 899 aaKnown RBP5.08□□□□□ -1.6
NUP116YMR047C REC8Q12188 680 aa5.08□□□□□ -1.6
NUP116YMR047C GFA1P14742 717 aaKnown RBP5.08□□□□□ -1.6
NUP116YMR047C DAL7P21826 554 aa5.08□□□□□ -1.6
NUP116YMR047C TRK2P28584 889 aa5.08□□□□□ -1.6
NUP116YMR047C YKL091CP33324 310 aaKnown RBP5.08□□□□□ -1.6
NUP116YMR047C HSP78P33416 811 aa5.08□□□□□ -1.6
NUP116YMR047C HCS1P34243 683 aa5.08□□□□□ -1.6
NUP116YMR047C TOM20P35180 183 aa5.08□□□□□ -1.6
NUP116YMR047C FUI1P38196 639 aa5.08□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms