RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W MTL1P53214 551 aa5.7□□□□□ -1.5
VPS36YLR417W THI22Q06490 572 aa5.7□□□□□ -1.5
VPS36YLR417W SSP2Q08646 371 aa5.7□□□□□ -1.5
VPS36YLR417W SSM4P40318 1319 aa5.7□□□□□ -1.5
VPS36YLR417W TUF1P02992 437 aaKnown RBP5.69□□□□□ -1.5
VPS36YLR417W PRE10P21242 288 aaKnown RBP RIP-Chip data5.69□□□□□ -1.5not detected
VPS36YLR417W MCM3P24279 971 aaKnown RBP5.69□□□□□ -1.5
VPS36YLR417W BEM3P32873 1128 aa5.69□□□□□ -1.5
VPS36YLR417W PSY4P38193 441 aa5.69□□□□□ -1.5
VPS36YLR417W CDS1P38221 457 aa5.69□□□□□ -1.5
VPS36YLR417W TAH11P47112 604 aa5.69□□□□□ -1.5
VPS36YLR417W CPR6P53691 371 aaKnown RBP5.69□□□□□ -1.5
VPS36YLR417W LAS17Q12446 633 aa5.69□□□□□ -1.5
VPS36YLR417W GAS1P22146 559 aaKnown RBP5.68□□□□□ -1.5
VPS36YLR417W XRS2P33301 854 aa5.68□□□□□ -1.5
VPS36YLR417W STT3P39007 718 aaKnown RBP5.68□□□□□ -1.5
VPS36YLR417W ERP2P39704 215 aa5.68□□□□□ -1.5
VPS36YLR417W MDR1P53258 950 aa5.68□□□□□ -1.5
VPS36YLR417W GTR1Q00582 310 aa5.68□□□□□ -1.5
VPS36YLR417W DLT1Q04216 342 aa5.68□□□□□ -1.5
VPS36YLR417W OPY2Q06810 360 aa5.68□□□□□ -1.5
VPS36YLR417W AIM41Q12032 185 aa5.68□□□□□ -1.5
VPS36YLR417W PHO5P00635 467 aa5.68□□□□□ -1.5
VPS36YLR417W URA3P03962 267 aa5.68□□□□□ -1.5
VPS36YLR417W MET3P08536 511 aa5.68□□□□□ -1.5
VPS36YLR417W MIS1P09440 975 aaKnown RBP5.68□□□□□ -1.5
VPS36YLR417W GFA1P14742 717 aaKnown RBP5.68□□□□□ -1.5
VPS36YLR417W PRP6P19735 899 aaPredicted RBP5.68□□□□□ -1.5
VPS36YLR417W MAC1P35192 417 aa5.68□□□□□ -1.5
VPS36YLR417W NUP60P39705 539 aa5.68□□□□□ -1.5
VPS36YLR417W HOS4P40480 1083 aa5.68□□□□□ -1.5
VPS36YLR417W PRP43P53131 767 aaKnown RBP5.68□□□□□ -1.5
VPS36YLR417W COG4Q06096 861 aa5.68□□□□□ -1.5
VPS36YLR417W TMA10Q06177 86 aa5.68□□□□□ -1.5
VPS36YLR417W CRD1Q07560 283 aa5.68□□□□□ -1.5
VPS36YLR417W CAF20P12962 161 aaKnown RBP5.67□□□□□ -1.5
VPS36YLR417W SIR1P21691 654 aa5.67□□□□□ -1.5
VPS36YLR417W TOD6P34219 525 aa5.67□□□□□ -1.5
VPS36YLR417W CRG1P38892 291 aaRIP-Chip data5.67□□□□□ -1.5not detected
VPS36YLR417W FTR1P40088 404 aa5.67□□□□□ -1.5
VPS36YLR417W MNN10P50108 393 aaKnown RBP5.67□□□□□ -1.5
VPS36YLR417W MUP1P50276 574 aa5.67□□□□□ -1.5
VPS36YLR417W YCG1Q06680 1035 aa5.67□□□□□ -1.5
VPS36YLR417W AAD4Q07747 329 aa5.67□□□□□ -1.5
VPS36YLR417W YLR358CO13565 187 aa5.66□□□□□ -1.5
VPS36YLR417W ARG1P22768 420 aa5.66□□□□□ -1.5
VPS36YLR417W DCG1P32460 244 aa5.66□□□□□ -1.5
VPS36YLR417W FMO1P38866 432 aa5.66□□□□□ -1.5
VPS36YLR417W RAD26P40352 1085 aa5.66□□□□□ -1.5
VPS36YLR417W FAF1P40546 346 aaPredicted RBP5.66□□□□□ -1.5
VPS36YLR417W YDL183CP48569 320 aa5.66□□□□□ -1.5
VPS36YLR417W MRPL13Q02204 264 aa5.66□□□□□ -1.5
VPS36YLR417W FDC1Q03034 503 aa5.66□□□□□ -1.5
VPS36YLR417W YFT2Q06676 274 aa5.66□□□□□ -1.5
VPS36YLR417W IWR1Q07532 353 aaPredicted RBP5.66□□□□□ -1.5
VPS36YLR417W NEW1Q08972 1196 aaKnown RBP5.66□□□□□ -1.5
VPS36YLR417W MTF2P10849 440 aa5.65□□□□□ -1.5
VPS36YLR417W YCL049CP25577 312 aa5.65□□□□□ -1.5
VPS36YLR417W YBR053CP38235 358 aa5.65□□□□□ -1.5
VPS36YLR417W COS111P38308 924 aa5.65□□□□□ -1.5
VPS36YLR417W PUG1P40100 303 aa5.65□□□□□ -1.5
VPS36YLR417W ELO3P40319 345 aa5.65□□□□□ -1.5
VPS36YLR417W SMK1P41808 388 aa5.65□□□□□ -1.5
VPS36YLR417W POL3P15436 1097 aa5.65□□□□□ -1.51
VPS36YLR417W PRP28P23394 588 aa5.65□□□□□ -1.51
VPS36YLR417W GFD2P25370 566 aaKnown RBP5.65□□□□□ -1.51
VPS36YLR417W RER1P25560 188 aa5.65□□□□□ -1.51
VPS36YLR417W FEN2P25621 512 aaKnown RBP5.65□□□□□ -1.51
VPS36YLR417W BCS1P32839 456 aa5.65□□□□□ -1.51
VPS36YLR417W RRN3P36070 627 aa5.65□□□□□ -1.51
VPS36YLR417W PIG2P40187 538 aa5.65□□□□□ -1.51
VPS36YLR417W YIL077CP40508 320 aa5.65□□□□□ -1.51
VPS36YLR417W GSM1P42950 618 aa5.65□□□□□ -1.51
VPS36YLR417W UBA2P52488 636 aa5.65□□□□□ -1.51
VPS36YLR417W MCM6P53091 1017 aaKnown RBP5.65□□□□□ -1.51
VPS36YLR417W ARC35P53731 342 aaKnown RBP5.65□□□□□ -1.51
VPS36YLR417W NUC1P08466 329 aa5.64□□□□□ -1.51
VPS36YLR417W RPA135P22138 1203 aaKnown RBP5.64□□□□□ -1.51
VPS36YLR417W MCM10P32354 571 aa5.64□□□□□ -1.51
VPS36YLR417W RPN12P32496 274 aa5.64□□□□□ -1.51
VPS36YLR417W SFB3P38810 929 aa5.64□□□□□ -1.51
VPS36YLR417W CLF1Q12309 687 aaPredicted RBP5.64□□□□□ -1.51
VPS36YLR417W RRI2Q12348 645 aa5.64□□□□□ -1.51
VPS36YLR417W GLT1Q12680 2145 aaKnown RBP5.64□□□□□ -1.51
VPS36YLR417W NCP1P16603 691 aaKnown RBP5.63□□□□□ -1.51
VPS36YLR417W TUP1P16649 713 aa5.63□□□□□ -1.51
VPS36YLR417W CLB4P24871 460 aa5.63□□□□□ -1.51
VPS36YLR417W MVD1P32377 396 aaKnown RBP5.63□□□□□ -1.51
VPS36YLR417W FRD1P32614 470 aaKnown RBP5.63□□□□□ -1.51
VPS36YLR417W UBC11P52492 156 aa5.63□□□□□ -1.51
VPS36YLR417W ACS1Q01574 713 aa5.63□□□□□ -1.51
VPS36YLR417W UBC1P21734 215 aaKnown RBP5.62□□□□□ -1.51
VPS36YLR417W NPR3P38742 1146 aa5.62□□□□□ -1.51
VPS36YLR417W KAP123P40069 1113 aaKnown RBP5.62□□□□□ -1.51
VPS36YLR417W BUL1P48524 976 aa5.62□□□□□ -1.51
VPS36YLR417W YMR018WQ04364 514 aa5.62□□□□□ -1.51
VPS36YLR417W CHS5Q12114 671 aaKnown RBP5.62□□□□□ -1.51
VPS36YLR417W SEC12P11655 471 aa5.62□□□□□ -1.51
VPS36YLR417W BCD1P38772 366 aa5.62□□□□□ -1.51
VPS36YLR417W REV7P38927 245 aa5.62□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 99.1 ms