RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W PMT6P42934 759 aa4.35□□□□□ -1.71
VPS38YLR360W TIM50Q02776 476 aa4.35□□□□□ -1.71
VPS38YLR360W RKI1Q12189 258 aa4.35□□□□□ -1.71
VPS38YLR360W NOP56Q12460 504 aaKnown RBP RIP-Chip data4.35□□□□□ -1.71not detected
VPS38YLR360W TMA17Q12513 150 aa4.35□□□□□ -1.71
VPS38YLR360W BNR1P40450 1375 aa4.35□□□□□ -1.71
VPS38YLR360W STE12P13574 688 aa4.34□□□□□ -1.71
VPS38YLR360W TUP1P16649 713 aa4.34□□□□□ -1.71
VPS38YLR360W ATP12P22135 325 aa4.34□□□□□ -1.71
VPS38YLR360W AEP2P22136 580 aa4.34□□□□□ -1.71
VPS38YLR360W MF(ALPHA)2P32435 120 aa4.34□□□□□ -1.71
VPS38YLR360W PPE1P38796 400 aa4.34□□□□□ -1.71
VPS38YLR360W RIX1P38883 763 aaPredicted RBP4.34□□□□□ -1.71
VPS38YLR360W YEL020CP39994 560 aa4.34□□□□□ -1.71
VPS38YLR360W FTR1P40088 404 aa4.34□□□□□ -1.71
VPS38YLR360W PRM2P40534 656 aa4.34□□□□□ -1.71
VPS38YLR360W ENP2P48234 707 aaKnown RBP4.34□□□□□ -1.71
VPS38YLR360W FDC1Q03034 503 aa4.34□□□□□ -1.71
VPS38YLR360W SKY1Q03656 742 aa4.34□□□□□ -1.71
VPS38YLR360W UFO1Q04511 668 aa4.34□□□□□ -1.71
VPS38YLR360W NGL1Q08213 363 aaKnown RBP4.34□□□□□ -1.71
VPS38YLR360W BMS1Q08965 1183 aaKnown RBP4.34□□□□□ -1.71
VPS38YLR360W ACO1P19414 778 aaKnown RBP RIP-Chip data4.33□□□□□ -1.72not detected
VPS38YLR360W ADY2P25613 283 aa4.33□□□□□ -1.72
VPS38YLR360W HXT4P32467 576 aa4.33□□□□□ -1.72
VPS38YLR360W CDS1P38221 457 aa4.33□□□□□ -1.72
VPS38YLR360W MUP3P38734 546 aa4.33□□□□□ -1.72
VPS38YLR360W PEA2P40091 420 aa4.33□□□□□ -1.72
VPS38YLR360W YJR120WP47157 116 aa4.33□□□□□ -1.72
VPS38YLR360W SPC105P53148 917 aa4.33□□□□□ -1.72
VPS38YLR360W MDM20Q12387 796 aaKnown RBP4.33□□□□□ -1.72
VPS38YLR360W TUB1P09733 447 aaKnown RBP4.32□□□□□ -1.72
VPS38YLR360W RPA135P22138 1203 aaKnown RBP4.32□□□□□ -1.72
VPS38YLR360W CUE2P36075 443 aaKnown RBP4.32□□□□□ -1.72
VPS38YLR360W YMC2P38087 329 aa4.32□□□□□ -1.72
VPS38YLR360W ATF1P40353 525 aa4.32□□□□□ -1.72
VPS38YLR360W SNF12P53628 566 aa4.32□□□□□ -1.72
VPS38YLR360W LGE1Q02796 332 aaKnown RBP4.32□□□□□ -1.72
VPS38YLR360W NGL2Q03264 515 aaKnown RBP4.32□□□□□ -1.72
VPS38YLR360W TRS23Q03784 219 aa4.32□□□□□ -1.72
VPS38YLR360W ARO10Q06408 635 aa4.32□□□□□ -1.72
VPS38YLR360W AIM41Q12032 185 aa4.32□□□□□ -1.72
VPS38YLR360W PHO5P00635 467 aa4.31□□□□□ -1.72
VPS38YLR360W YPT53P36019 220 aa4.31□□□□□ -1.72
VPS38YLR360W YBR071WP38243 211 aa4.31□□□□□ -1.72
VPS38YLR360W EHT1P38295 451 aa4.31□□□□□ -1.72
VPS38YLR360W PMC1P38929 1173 aaPredicted RBP4.31□□□□□ -1.72
VPS38YLR360W THI6P41835 540 aa4.31□□□□□ -1.72
VPS38YLR360W NIT2P47016 307 aa4.31□□□□□ -1.72
VPS38YLR360W YGR054WP53235 642 aaKnown RBP4.31□□□□□ -1.72
VPS38YLR360W SQS1P53866 767 aaKnown RBP4.31□□□□□ -1.72
VPS38YLR360W YDR179W-AQ03983 463 aa4.31□□□□□ -1.72
VPS38YLR360W YCG1Q06680 1035 aa4.31□□□□□ -1.72
VPS38YLR360W ILV6P25605 309 aaKnown RBP4.3□□□□□ -1.72
VPS38YLR360W FLO10P36170 1169 aa4.3□□□□□ -1.72
VPS38YLR360W YEL025CP39991 1188 aa4.3□□□□□ -1.72
VPS38YLR360W MIT1P40002 666 aa4.3□□□□□ -1.72
VPS38YLR360W ASN1P49089 572 aaKnown RBP4.3□□□□□ -1.72
VPS38YLR360W SLD3P53135 668 aa4.3□□□□□ -1.72
VPS38YLR360W DAK1P54838 584 aaKnown RBP4.3□□□□□ -1.72
VPS38YLR360W MFM1Q02783 413 aa4.3□□□□□ -1.72
VPS38YLR360W CEF1Q03654 590 aaPredicted RBP4.3□□□□□ -1.72
VPS38YLR360W HLR1Q04429 423 aa4.3□□□□□ -1.72
VPS38YLR360W YEL076C-AP0CX16 216 aa4.29□□□□□ -1.72
VPS38YLR360W YLR464WP0CX17 216 aa4.29□□□□□ -1.72
VPS38YLR360W HMG2P12684 1045 aa4.29□□□□□ -1.72
VPS38YLR360W COX11P19516 300 aaKnown RBP4.29□□□□□ -1.72
VPS38YLR360W MTC7P32633 139 aa4.29□□□□□ -1.72
VPS38YLR360W SRP68P38687 599 aaKnown RBP4.29□□□□□ -1.72
VPS38YLR360W YEL076CP39971 216 aa4.29□□□□□ -1.72
VPS38YLR360W YML122CQ03207 126 aa4.29□□□□□ -1.72
VPS38YLR360W EFR3Q03653 782 aaKnown RBP4.29□□□□□ -1.72
VPS38YLR360W KAR1P11927 433 aa4.28□□□□□ -1.72
VPS38YLR360W STE4P18851 423 aa4.28□□□□□ -1.72
VPS38YLR360W SAT4P25333 603 aaKnown RBP4.28□□□□□ -1.72
VPS38YLR360W TFC4P33339 1025 aa4.28□□□□□ -1.72
VPS38YLR360W RMA1P36001 430 aaKnown RBP4.28□□□□□ -1.72
VPS38YLR360W MRPL7P36519 292 aa4.28□□□□□ -1.72
VPS38YLR360W YIP4P53093 235 aa4.28□□□□□ -1.72
VPS38YLR360W FOL1P53848 824 aa4.28□□□□□ -1.72
VPS38YLR360W COG6P53959 839 aa4.28□□□□□ -1.72
VPS38YLR360W ECM38Q05902 660 aaPredicted RBP4.28□□□□□ -1.72
VPS38YLR360W CWC2Q12046 339 aaPredicted RBP4.28□□□□□ -1.72
VPS38YLR360W SSB1P11484 613 aaKnown RBP4.27□□□□□ -1.73
VPS38YLR360W DHR2P36009 735 aaPredicted RBP4.27□□□□□ -1.73
VPS38YLR360W RIM4P38741 713 aa4.27□□□□□ -1.73
VPS38YLR360W PIH1P38768 344 aa4.27□□□□□ -1.73
VPS38YLR360W PAC2P39937 518 aa4.27□□□□□ -1.73
VPS38YLR360W SSB2P40150 613 aaKnown RBP4.27□□□□□ -1.73
VPS38YLR360W YDL183CP48569 320 aa4.27□□□□□ -1.73
VPS38YLR360W MRK1P50873 501 aa4.27□□□□□ -1.73
VPS38YLR360W MDR1P53258 950 aa4.27□□□□□ -1.73
VPS38YLR360W FMP30Q02883 468 aa4.27□□□□□ -1.73
VPS38YLR360W SLK19Q08581 821 aaKnown RBP4.27□□□□□ -1.73
VPS38YLR360W YPL216WQ08964 1102 aa4.27□□□□□ -1.73
VPS38YLR360W TUF1P02992 437 aaKnown RBP4.26□□□□□ -1.73
VPS38YLR360W TPK2P06245 380 aa4.26□□□□□ -1.73
VPS38YLR360W ADE5,7P07244 802 aaKnown RBP4.26□□□□□ -1.73
VPS38YLR360W HEM12P32347 362 aaPredicted RBP4.26□□□□□ -1.73
VPS38YLR360W UGP1P32861 499 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms