RNA–Protein interactions for RNA: YLR115W

CFT2, Transcript of Subunit of the mRNA cleavage and polyadenlylation factor (CPF), yeastyeast

Gene CFT2, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT2YLR115W KSP1P38691 1029 aaKnown RBP2.33□□□□□ -2.04
CFT2YLR115W PMC1P38929 1173 aaPredicted RBP2.33□□□□□ -2.04
CFT2YLR115W MRK1P50873 501 aa2.33□□□□□ -2.04
CFT2YLR115W SNF12P53628 566 aa2.33□□□□□ -2.04
CFT2YLR115W YLR407WQ06070 228 aa2.33□□□□□ -2.04
CFT2YLR115W BRE1Q07457 700 aaKnown RBP2.33□□□□□ -2.04
CFT2YLR115W NOP14Q99207 810 aaKnown RBP2.33□□□□□ -2.04
CFT2YLR115W DNF3Q12674 1656 aa2.33□□□□□ -2.04
CFT2YLR115W NUP170P38181 1502 aa2.32□□□□□ -2.04
CFT2YLR115W PHO5P00635 467 aa2.32□□□□□ -2.04
CFT2YLR115W FRS1P15624 595 aaKnown RBP2.32□□□□□ -2.04
CFT2YLR115W MDM10P18409 493 aa2.32□□□□□ -2.04
CFT2YLR115W PET127P32606 800 aa2.32□□□□□ -2.04
CFT2YLR115W YKU70P32807 602 aa2.32□□□□□ -2.04
CFT2YLR115W RPS0AP32905 252 aaKnown RBP2.32□□□□□ -2.04
CFT2YLR115W MUP3P38734 546 aa2.32□□□□□ -2.04
CFT2YLR115W PIG2P40187 538 aa2.32□□□□□ -2.04
CFT2YLR115W GIR2Q03768 265 aaPredicted RBP2.32□□□□□ -2.04
CFT2YLR115W UTP14Q04500 899 aaKnown RBP2.32□□□□□ -2.04
CFT2YLR115W YPS7Q06325 596 aa2.32□□□□□ -2.04
CFT2YLR115W YFT2Q06676 274 aa2.32□□□□□ -2.04
CFT2YLR115W GUD1Q07729 489 aa2.32□□□□□ -2.04
CFT2YLR115W SPO11P23179 398 aa2.32□□□□□ -2.04
CFT2YLR115W MPE1P35728 441 aaKnown RBP2.32□□□□□ -2.04
CFT2YLR115W YIL077CP40508 320 aa2.32□□□□□ -2.04
CFT2YLR115W MPP10P47083 593 aaKnown RBP2.32□□□□□ -2.04
CFT2YLR115W ESF2P53743 316 aaKnown RBP2.32□□□□□ -2.04
CFT2YLR115W YDL086WQ07505 273 aa2.32□□□□□ -2.04
CFT2YLR115W VHS3Q08438 674 aa2.32□□□□□ -2.04
CFT2YLR115W BMS1Q08965 1183 aaKnown RBP2.32□□□□□ -2.04
CFT2YLR115W RPA135P22138 1203 aaKnown RBP2.31□□□□□ -2.04
CFT2YLR115W RPN12P32496 274 aa2.31□□□□□ -2.04
CFT2YLR115W MAL31P38156 614 aa2.31□□□□□ -2.04
CFT2YLR115W COS111P38308 924 aa2.31□□□□□ -2.04
CFT2YLR115W MNN1P39106 762 aa2.31□□□□□ -2.04
CFT2YLR115W NMA2P53204 395 aa2.31□□□□□ -2.04
CFT2YLR115W GPD1Q00055 391 aaKnown RBP2.31□□□□□ -2.04
CFT2YLR115W THI7Q05998 598 aa2.31□□□□□ -2.04
CFT2YLR115W MRI1Q06489 411 aaKnown RBP2.31□□□□□ -2.04
CFT2YLR115W OSW1Q08692 278 aa2.31□□□□□ -2.04
CFT2YLR115W UFD4P33202 1483 aa2.31□□□□□ -2.04
CFT2YLR115W SCC2Q04002 1493 aa2.31□□□□□ -2.04
CFT2YLR115W LAM4P38800 1345 aa2.31□□□□□ -2.04
CFT2YLR115W TFC3P34111 1160 aa2.31□□□□□ -2.04
CFT2YLR115W BUD8P41698 603 aa2.31□□□□□ -2.04
CFT2YLR115W DNM1P54861 757 aa2.31□□□□□ -2.04
CFT2YLR115W COG4Q06096 861 aa2.31□□□□□ -2.04
CFT2YLR115W IZH3Q07959 543 aa2.31□□□□□ -2.04
CFT2YLR115W ERG20P08524 352 aaKnown RBP2.3□□□□□ -2.04
CFT2YLR115W SWI6P09959 803 aa2.3□□□□□ -2.04
CFT2YLR115W HXT6P39003 570 aaKnown RBP2.3□□□□□ -2.04
CFT2YLR115W HXT7P39004 570 aa2.3□□□□□ -2.04
CFT2YLR115W RET2P43621 546 aa2.3□□□□□ -2.04
CFT2YLR115W YJR096WP47137 282 aa2.3□□□□□ -2.04
CFT2YLR115W STP4Q07351 490 aa2.3□□□□□ -2.04
CFT2YLR115W RKI1Q12189 258 aa2.3□□□□□ -2.04
CFT2YLR115W CUP1-1P0CX80 61 aa2.3□□□□□ -2.04
CFT2YLR115W CUP1-2P0CX81 61 aa2.3□□□□□ -2.04
CFT2YLR115W ABF1P14164 731 aa2.3□□□□□ -2.04
CFT2YLR115W YMC1P32331 307 aa2.3□□□□□ -2.04
CFT2YLR115W CKB2P38930 258 aa2.3□□□□□ -2.04
CFT2YLR115W CCT5P40413 562 aaKnown RBP2.3□□□□□ -2.04
CFT2YLR115W SDA1P53313 767 aaKnown RBP2.3□□□□□ -2.04
CFT2YLR115W DIP5P53388 608 aa2.3□□□□□ -2.04
CFT2YLR115W SPC98P53540 846 aa2.3□□□□□ -2.04
CFT2YLR115W HFD1Q04458 532 aa2.3□□□□□ -2.04
CFT2YLR115W YSH1Q06224 779 aaPredicted RBP2.3□□□□□ -2.04
CFT2YLR115W SPO14P36126 1683 aa2.3□□□□□ -2.04
CFT2YLR115W TRM3Q07527 1436 aa2.29□□□□□ -2.04
CFT2YLR115W VPS34P22543 875 aa2.29□□□□□ -2.04
CFT2YLR115W KCC4P25389 1037 aa2.29□□□□□ -2.04
CFT2YLR115W JNM1P36224 373 aa2.29□□□□□ -2.04
CFT2YLR115W YEN1P40028 759 aa2.29□□□□□ -2.04
CFT2YLR115W NYV1Q12255 253 aa2.29□□□□□ -2.04
CFT2YLR115W NKP1Q12493 238 aa2.29□□□□□ -2.04
CFT2YLR115W RPS21BQ3E754 87 aaKnown RBP2.29□□□□□ -2.04
CFT2YLR115W STE4P18851 423 aa2.29□□□□□ -2.04
CFT2YLR115W KIN82P25341 720 aa2.29□□□□□ -2.04
CFT2YLR115W PRE4P30657 266 aa2.29□□□□□ -2.04
CFT2YLR115W ELF1P36053 145 aa2.29□□□□□ -2.04
CFT2YLR115W CDS1P38221 457 aa2.29□□□□□ -2.04
CFT2YLR115W PMT6P42934 759 aa2.29□□□□□ -2.04
CFT2YLR115W ASN1P49089 572 aaKnown RBP2.29□□□□□ -2.04
CFT2YLR115W NOP15P53927 220 aaPredicted RBP2.29□□□□□ -2.04
CFT2YLR115W ECM9Q02202 377 aa2.29□□□□□ -2.04
CFT2YLR115W YMR210WQ03649 449 aa2.29□□□□□ -2.04
CFT2YLR115W VBA4Q04602 768 aaKnown RBP2.29□□□□□ -2.04
CFT2YLR115W XRN1P22147 1528 aaKnown RBP2.29□□□□□ -2.04
CFT2YLR115W LEU2P04173 364 aaPredicted RBP2.28□□□□□ -2.04
CFT2YLR115W STE12P13574 688 aa2.28□□□□□ -2.04
CFT2YLR115W TRX2P22803 104 aaKnown RBP2.28□□□□□ -2.04
CFT2YLR115W SSD1P24276 1250 aaKnown RBP RIP-Chip data2.28□□□□□ -2.04not detected
CFT2YLR115W PWP2P25635 923 aaKnown RBP2.28□□□□□ -2.04
CFT2YLR115W GRX4P32642 244 aa2.28□□□□□ -2.04
CFT2YLR115W APL3P38065 1025 aa2.28□□□□□ -2.04
CFT2YLR115W SNM1P40993 198 aa2.28□□□□□ -2.04
CFT2YLR115W YDR179W-AQ03983 463 aa2.28□□□□□ -2.04
CFT2YLR115W HOF1Q05080 669 aa2.28□□□□□ -2.04
CFT2YLR115W NTH1P32356 751 aa2.28□□□□□ -2.04
CFT2YLR115W TDA3P38758 523 aa2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms