RNA–Protein interactions for RNA: YLR040C

AFB1, Transcript of MATalpha-specific a-factor blocker, yeastyeast

Gene AFB1, Length 675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFB1YLR040C KCC4P25389 1037 aa3.56□□□□□ -1.84
AFB1YLR040C NTH1P32356 751 aa3.56□□□□□ -1.84
AFB1YLR040C MF(ALPHA)2P32435 120 aa3.56□□□□□ -1.84
AFB1YLR040C EUG1P32474 517 aa3.56□□□□□ -1.84
AFB1YLR040C MTC7P32633 139 aa3.56□□□□□ -1.84
AFB1YLR040C GRX4P32642 244 aa3.56□□□□□ -1.84
AFB1YLR040C CUE2P36075 443 aaKnown RBP3.56□□□□□ -1.84
AFB1YLR040C APL3P38065 1025 aa3.56□□□□□ -1.84
AFB1YLR040C PRM2P40534 656 aa3.56□□□□□ -1.84
AFB1YLR040C SPO1P53541 631 aa3.56□□□□□ -1.84
AFB1YLR040C TIM50Q02776 476 aa3.56□□□□□ -1.84
AFB1YLR040C PPN1Q04119 674 aa3.56□□□□□ -1.84
AFB1YLR040C BMS1Q08965 1183 aaKnown RBP3.56□□□□□ -1.84
AFB1YLR040C STE12P13574 688 aa3.55□□□□□ -1.84
AFB1YLR040C YHR033WP38690 423 aa3.55□□□□□ -1.84
AFB1YLR040C DUG1P43616 481 aaKnown RBP3.55□□□□□ -1.84
AFB1YLR040C FDC1Q03034 503 aa3.55□□□□□ -1.84
AFB1YLR040C NSE5Q03718 556 aa3.55□□□□□ -1.84
AFB1YLR040C NOP56Q12460 504 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84not detected
AFB1YLR040C RPN13O13563 156 aa3.54□□□□□ -1.84
AFB1YLR040C STE4P18851 423 aa3.54□□□□□ -1.84
AFB1YLR040C ACO1P19414 778 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
AFB1YLR040C SPO11P23179 398 aa3.54□□□□□ -1.84
AFB1YLR040C DGR2P32330 852 aa3.54□□□□□ -1.84
AFB1YLR040C HXT4P32467 576 aa3.54□□□□□ -1.84
AFB1YLR040C RMA1P36001 430 aaKnown RBP3.54□□□□□ -1.84
AFB1YLR040C EHT1P38295 451 aa3.54□□□□□ -1.84
AFB1YLR040C MUP3P38734 546 aa3.54□□□□□ -1.84
AFB1YLR040C PPE1P38796 400 aa3.54□□□□□ -1.84
AFB1YLR040C PMC1P38929 1173 aaPredicted RBP3.54□□□□□ -1.84
AFB1YLR040C PMT6P42934 759 aa3.54□□□□□ -1.84
AFB1YLR040C YJR120WP47157 116 aa3.54□□□□□ -1.84
AFB1YLR040C YDL183CP48569 320 aa3.54□□□□□ -1.84
AFB1YLR040C ASN1P49089 572 aaKnown RBP3.54□□□□□ -1.84
AFB1YLR040C YGL081WP53156 320 aa3.54□□□□□ -1.84
AFB1YLR040C UFO1Q04511 668 aa3.54□□□□□ -1.84
AFB1YLR040C NGL1Q08213 363 aaKnown RBP3.54□□□□□ -1.84
AFB1YLR040C NDJ1Q12366 352 aa3.54□□□□□ -1.84
AFB1YLR040C ILV6P25605 309 aaKnown RBP3.53□□□□□ -1.84
AFB1YLR040C YMC1P32331 307 aa3.53□□□□□ -1.84
AFB1YLR040C MRPL7P36519 292 aa3.53□□□□□ -1.84
AFB1YLR040C PAC2P39937 518 aa3.53□□□□□ -1.84
AFB1YLR040C NIT2P47016 307 aa3.53□□□□□ -1.84
AFB1YLR040C YGR054WP53235 642 aaKnown RBP3.53□□□□□ -1.84
AFB1YLR040C EFR3Q03653 782 aaKnown RBP3.53□□□□□ -1.84
AFB1YLR040C SKY1Q03656 742 aa3.53□□□□□ -1.84
AFB1YLR040C YDR179W-AQ03983 463 aa3.53□□□□□ -1.84
AFB1YLR040C IMO32P53219 342 aa3.52□□□□□ -1.85
AFB1YLR040C TRS23Q03784 219 aa3.52□□□□□ -1.85
AFB1YLR040C HLR1Q04429 423 aa3.52□□□□□ -1.85
AFB1YLR040C ARR3Q06598 404 aa3.52□□□□□ -1.85
AFB1YLR040C YCG1Q06680 1035 aa3.52□□□□□ -1.85
AFB1YLR040C YPR027CQ12079 277 aa3.52□□□□□ -1.85
AFB1YLR040C MDM20Q12387 796 aaKnown RBP3.52□□□□□ -1.85
AFB1YLR040C TMA17Q12513 150 aa3.52□□□□□ -1.85
AFB1YLR040C RMP1Q12530 201 aa3.52□□□□□ -1.85
AFB1YLR040C HMG2P12684 1045 aa3.51□□□□□ -1.85
AFB1YLR040C RPA135P22138 1203 aaKnown RBP3.51□□□□□ -1.85
AFB1YLR040C TSR4P25040 408 aa3.51□□□□□ -1.85
AFB1YLR040C SAT4P25333 603 aaKnown RBP3.51□□□□□ -1.85
AFB1YLR040C YBR071WP38243 211 aa3.51□□□□□ -1.85
AFB1YLR040C ENP1P38333 483 aaKnown RBP3.51□□□□□ -1.85
AFB1YLR040C RNR4P49723 345 aaKnown RBP3.51□□□□□ -1.85
AFB1YLR040C MRK1P50873 501 aa3.51□□□□□ -1.85
AFB1YLR040C YGL117WP53133 265 aa3.51□□□□□ -1.85
AFB1YLR040C NGL2Q03264 515 aaKnown RBP3.51□□□□□ -1.85
AFB1YLR040C AIM44Q99299 758 aa3.51□□□□□ -1.85
AFB1YLR040C YEL076C-AP0CX16 216 aa3.5□□□□□ -1.85
AFB1YLR040C YLR464WP0CX17 216 aa3.5□□□□□ -1.85
AFB1YLR040C AEP2P22136 580 aa3.5□□□□□ -1.85
AFB1YLR040C CNE1P27825 502 aa3.5□□□□□ -1.85
AFB1YLR040C UGP1P32861 499 aaKnown RBP3.5□□□□□ -1.85
AFB1YLR040C YEL076CP39971 216 aa3.5□□□□□ -1.85
AFB1YLR040C LRO1P40345 661 aa3.5□□□□□ -1.85
AFB1YLR040C IRC5P43610 853 aa3.5□□□□□ -1.85
AFB1YLR040C ARG7Q04728 441 aa3.5□□□□□ -1.85
AFB1YLR040C THI7Q05998 598 aa3.5□□□□□ -1.85
AFB1YLR040C YOR378WQ08902 515 aa3.5□□□□□ -1.85
AFB1YLR040C AIM41Q12032 185 aa3.5□□□□□ -1.85
AFB1YLR040C TPK2P06245 380 aa3.49□□□□□ -1.85
AFB1YLR040C ADE5,7P07244 802 aaKnown RBP3.49□□□□□ -1.85
AFB1YLR040C COX11P19516 300 aaKnown RBP3.49□□□□□ -1.85
AFB1YLR040C VPS34P22543 875 aa3.49□□□□□ -1.85
AFB1YLR040C HEM12P32347 362 aaPredicted RBP3.49□□□□□ -1.85
AFB1YLR040C SRP68P38687 599 aaKnown RBP3.49□□□□□ -1.85
AFB1YLR040C EAF5P39995 279 aa3.49□□□□□ -1.85
AFB1YLR040C ENP2P48234 707 aaKnown RBP3.49□□□□□ -1.85
AFB1YLR040C YIP4P53093 235 aa3.49□□□□□ -1.85
AFB1YLR040C SPC105P53148 917 aa3.49□□□□□ -1.85
AFB1YLR040C COG6P53959 839 aa3.49□□□□□ -1.85
AFB1YLR040C DAK1P54838 584 aaKnown RBP3.49□□□□□ -1.85
AFB1YLR040C MFM1Q02783 413 aa3.49□□□□□ -1.85
AFB1YLR040C COQ11Q05892 277 aa3.49□□□□□ -1.85
AFB1YLR040C ECM38Q05902 660 aaPredicted RBP3.49□□□□□ -1.85
AFB1YLR040C OSW1Q08692 278 aa3.49□□□□□ -1.85
AFB1YLR040C MDM10P18409 493 aa3.48□□□□□ -1.85
AFB1YLR040C YEL025CP39991 1188 aa3.48□□□□□ -1.85
AFB1YLR040C THI6P41835 540 aa3.48□□□□□ -1.85
AFB1YLR040C PEF1P53238 335 aa3.48□□□□□ -1.85
AFB1YLR040C CPR8P53728 308 aa3.48□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms