RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C YPT7P32939 208 aa3.69□□□□□ -1.82
CMS1YLR003C DSS1P39112 969 aa3.69□□□□□ -1.82
CMS1YLR003C BIT61P47041 543 aa3.69□□□□□ -1.82
CMS1YLR003C MRPL1Q04599 285 aa3.69□□□□□ -1.82
CMS1YLR003C BUD7Q08754 746 aa3.69□□□□□ -1.82
CMS1YLR003C NDD1Q08887 554 aa3.69□□□□□ -1.82
CMS1YLR003C HER1Q12276 1246 aa3.69□□□□□ -1.82
CMS1YLR003C YOR131CQ12486 218 aa3.69□□□□□ -1.82
CMS1YLR003C STI1P15705 589 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
CMS1YLR003C BSP1Q06604 576 aa3.68□□□□□ -1.82
CMS1YLR003C RPS9BP05755 195 aaKnown RBP3.67□□□□□ -1.82
CMS1YLR003C SSZ1P38788 538 aaKnown RBP3.67□□□□□ -1.82
CMS1YLR003C COQ6P53318 479 aa3.67□□□□□ -1.82
CMS1YLR003C MDM12Q92328 271 aa3.67□□□□□ -1.82
CMS1YLR003C SRD1P09007 221 aa3.66□□□□□ -1.82
CMS1YLR003C PEX6P33760 1030 aa3.66□□□□□ -1.82
CMS1YLR003C PBP2P38151 413 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
CMS1YLR003C OCA5P38738 679 aa3.66□□□□□ -1.82
CMS1YLR003C YMR124WP39523 943 aaKnown RBP3.66□□□□□ -1.82
CMS1YLR003C OAF1P39720 1047 aaPredicted RBP3.66□□□□□ -1.82
CMS1YLR003C EXO1P39875 702 aa3.66□□□□□ -1.82
CMS1YLR003C OPT1P40897 799 aa3.66□□□□□ -1.82
CMS1YLR003C YIP4P53093 235 aa3.66□□□□□ -1.82
CMS1YLR003C YNL018CP53976 612 aa3.66□□□□□ -1.82
CMS1YLR003C YDL073WQ07454 984 aa3.66□□□□□ -1.82
CMS1YLR003C VHS3Q08438 674 aa3.66□□□□□ -1.82
CMS1YLR003C SRL1Q08673 210 aa3.66□□□□□ -1.82
CMS1YLR003C YTA7P40340 1379 aa3.65□□□□□ -1.82
CMS1YLR003C GSY2P27472 705 aa3.65□□□□□ -1.83
CMS1YLR003C HOG1P32485 435 aa3.65□□□□□ -1.83
CMS1YLR003C PET127P32606 800 aa3.65□□□□□ -1.83
CMS1YLR003C MNN4P36044 1178 aa3.65□□□□□ -1.83
CMS1YLR003C YHR202WP38887 602 aa3.65□□□□□ -1.83
CMS1YLR003C VBA4Q04602 768 aaKnown RBP3.65□□□□□ -1.83
CMS1YLR003C YTH1Q06102 208 aaPredicted RBP3.65□□□□□ -1.83
CMS1YLR003C YLR111WQ12528 110 aa3.65□□□□□ -1.83
CMS1YLR003C WHI2P12611 486 aa3.64□□□□□ -1.83
CMS1YLR003C FRS1P15624 595 aaKnown RBP3.64□□□□□ -1.83
CMS1YLR003C CHZ1P40019 153 aaPredicted RBP3.64□□□□□ -1.83
CMS1YLR003C YJR039WP47107 1121 aa3.64□□□□□ -1.83
CMS1YLR003C AIM14P53109 570 aa3.64□□□□□ -1.83
CMS1YLR003C GPD1Q00055 391 aaKnown RBP3.64□□□□□ -1.83
CMS1YLR003C RDL1Q12305 139 aaKnown RBP3.64□□□□□ -1.83
CMS1YLR003C YMR085WP0CF18 432 aa3.63□□□□□ -1.83
CMS1YLR003C YER190C-BP0CX94 160 aa3.63□□□□□ -1.83
CMS1YLR003C YEL077W-AP0CX95 160 aa3.63□□□□□ -1.83
CMS1YLR003C YGR296C-BP0CX96 160 aa3.63□□□□□ -1.83
CMS1YLR003C YPL283W-BP0CX97 160 aa3.63□□□□□ -1.83
CMS1YLR003C YPR204C-AP0CX98 160 aa3.63□□□□□ -1.83
CMS1YLR003C HMG1P12683 1054 aa3.63□□□□□ -1.83
CMS1YLR003C MRPL7P36519 292 aa3.63□□□□□ -1.83
CMS1YLR003C YIL024CP40543 189 aa3.63□□□□□ -1.83
CMS1YLR003C MFM1Q02783 413 aa3.63□□□□□ -1.83
CMS1YLR003C SEC3P33332 1336 aaKnown RBP3.63□□□□□ -1.83
CMS1YLR003C GSY1P23337 708 aa3.62□□□□□ -1.83
CMS1YLR003C CNE1P27825 502 aa3.62□□□□□ -1.83
CMS1YLR003C ATO2P32907 282 aa3.62□□□□□ -1.83
CMS1YLR003C DED81P38707 554 aaKnown RBP3.62□□□□□ -1.83
CMS1YLR003C FLO5P38894 1075 aa3.62□□□□□ -1.83
CMS1YLR003C DOT6P40059 670 aaKnown RBP3.62□□□□□ -1.83
CMS1YLR003C NUP82P40368 713 aa3.62□□□□□ -1.83
CMS1YLR003C PPG1P32838 368 aa3.61□□□□□ -1.83
CMS1YLR003C PPE1P38796 400 aa3.61□□□□□ -1.83
CMS1YLR003C RPN4Q03465 531 aa3.61□□□□□ -1.83
CMS1YLR003C CEF1Q03654 590 aaPredicted RBP3.61□□□□□ -1.83
CMS1YLR003C SNA4Q07549 140 aa3.61□□□□□ -1.83
CMS1YLR003C PHO2P07269 559 aa3.6□□□□□ -1.83
CMS1YLR003C PRP22P24384 1145 aaKnown RBP3.6□□□□□ -1.83
CMS1YLR003C DUN1P39009 513 aa3.6□□□□□ -1.83
CMS1YLR003C TMN3P40071 706 aa3.6□□□□□ -1.83
CMS1YLR003C CFD1P40558 293 aa3.6□□□□□ -1.83
CMS1YLR003C BUD6P41697 788 aa3.6□□□□□ -1.83
CMS1YLR003C OSW7P43611 510 aa3.6□□□□□ -1.83
CMS1YLR003C GFD1Q04839 188 aaKnown RBP3.6□□□□□ -1.83
CMS1YLR003C ATG33Q06485 197 aa3.6□□□□□ -1.83
CMS1YLR003C YPL216WQ08964 1102 aa3.6□□□□□ -1.83
CMS1YLR003C DCS2Q12123 353 aa3.6□□□□□ -1.83
CMS1YLR003C SSD1P24276 1250 aaKnown RBP RIP-Chip data3.59□□□□□ -1.83not detected
CMS1YLR003C PCL2P25693 308 aa3.59□□□□□ -1.83
CMS1YLR003C NUG1P40010 520 aaKnown RBP3.59□□□□□ -1.83
CMS1YLR003C YFL015CP43578 164 aa3.59□□□□□ -1.83
CMS1YLR003C BUD17P53727 317 aa3.59□□□□□ -1.83
CMS1YLR003C EFR3Q03653 782 aaKnown RBP3.59□□□□□ -1.83
CMS1YLR003C FPR4Q06205 392 aaPredicted RBP3.59□□□□□ -1.83
CMS1YLR003C SPN1Q06505 410 aaPredicted RBP3.59□□□□□ -1.83
CMS1YLR003C AIM44Q99299 758 aa3.59□□□□□ -1.83
CMS1YLR003C PHO8P11491 566 aa3.58□□□□□ -1.84
CMS1YLR003C YCP4P25349 247 aaKnown RBP3.58□□□□□ -1.84
CMS1YLR003C LYS20P48570 428 aaKnown RBP3.58□□□□□ -1.84
CMS1YLR003C ORC1P54784 914 aaPredicted RBP3.58□□□□□ -1.84
CMS1YLR003C AAT1Q01802 451 aa3.58□□□□□ -1.84
CMS1YLR003C RCR2Q03446 210 aaKnown RBP3.58□□□□□ -1.84
CMS1YLR003C TPO3Q06451 622 aa3.58□□□□□ -1.84
CMS1YLR003C IMG2P25642 146 aaPredicted RBP3.57□□□□□ -1.84
CMS1YLR003C MSH2P25847 964 aa3.57□□□□□ -1.84
CMS1YLR003C PCM1P38628 557 aaKnown RBP3.57□□□□□ -1.84
CMS1YLR003C COP1P53622 1201 aaKnown RBP3.57□□□□□ -1.84
CMS1YLR003C YLR125WQ12138 136 aa3.57□□□□□ -1.84
CMS1YLR003C YEL076C-AP0CX16 216 aa3.56□□□□□ -1.84
CMS1YLR003C YLR464WP0CX17 216 aa3.56□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 68.5 ms