RNA–Protein interactions for RNA: YKL171W

NNK1, Transcript of Protein kinase, yeast

Gene NNK1, Length 2,787 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NNK1	YKL171W	HDA3	Q06623	655 aa		4.74	□□□□□ -1.65
NNK1	YKL171W	YDL129W	Q07555	291 aa		4.74	□□□□□ -1.65
NNK1	YKL171W	GUD1	Q07729	489 aa		4.74	□□□□□ -1.65
NNK1	YKL171W	PCD1	Q12524	340 aa		4.74	□□□□□ -1.65
NNK1	YKL171W	ESP1	Q03018	1630 aa		4.74	□□□□□ -1.65
NNK1	YKL171W	SER1	P33330	395 aa	Known RBP	4.74	□□□□□ -1.65
NNK1	YKL171W	GCS1	P35197	352 aa		4.74	□□□□□ -1.65
NNK1	YKL171W	CUE2	P36075	443 aa	Known RBP	4.74	□□□□□ -1.65
NNK1	YKL171W	HSL7	P38274	827 aa		4.74	□□□□□ -1.65
NNK1	YKL171W	TMN3	P40071	706 aa		4.74	□□□□□ -1.65
NNK1	YKL171W	UBP7	P40453	1071 aa		4.74	□□□□□ -1.65
NNK1	YKL171W	YGR054W	P53235	642 aa	Known RBP	4.74	□□□□□ -1.65
NNK1	YKL171W	CBK1	P53894	756 aa		4.74	□□□□□ -1.65
NNK1	YKL171W	TBF1	Q02457	562 aa		4.74	□□□□□ -1.65
NNK1	YKL171W	ECM22	Q05958	814 aa	Predicted RBP	4.74	□□□□□ -1.65
NNK1	YKL171W	ECM7	Q06200	448 aa		4.74	□□□□□ -1.65
NNK1	YKL171W	YPL277C	Q08989	487 aa		4.74	□□□□□ -1.65
NNK1	YKL171W	KCS1	Q12494	1050 aa		4.74	□□□□□ -1.65
NNK1	YKL171W	PMA2	P19657	947 aa		4.73	□□□□□ -1.65
NNK1	YKL171W	FAR1	P21268	830 aa		4.73	□□□□□ -1.65
NNK1	YKL171W	NGG1	P32494	702 aa		4.73	□□□□□ -1.65
NNK1	YKL171W	YKR018C	P36114	725 aa		4.73	□□□□□ -1.65
NNK1	YKL171W	SAH1	P39954	449 aa	Known RBP	4.73	□□□□□ -1.65
NNK1	YKL171W	XKS1	P42826	600 aa		4.73	□□□□□ -1.65
NNK1	YKL171W	LIA1	P47120	325 aa	Known RBP	4.73	□□□□□ -1.65
NNK1	YKL171W	BPL1	P48445	690 aa	Predicted RBP	4.73	□□□□□ -1.65
NNK1	YKL171W	HFM1	P51979	1187 aa		4.73	□□□□□ -1.65
NNK1	YKL171W	YGR067C	P53243	804 aa		4.73	□□□□□ -1.65
NNK1	YKL171W	MRPS17	Q03246	237 aa	Predicted RBP	4.73	□□□□□ -1.65
NNK1	YKL171W	YDR338C	Q05497	695 aa		4.73	□□□□□ -1.65
NNK1	YKL171W	DPL1	Q05567	589 aa		4.73	□□□□□ -1.65
NNK1	YKL171W	SPH1	Q06160	661 aa		4.73	□□□□□ -1.65
NNK1	YKL171W	STE3	P06783	470 aa		4.73	□□□□□ -1.65
NNK1	YKL171W	MRPL33	P20084	86 aa		4.73	□□□□□ -1.65
NNK1	YKL171W	UBC1	P21734	215 aa	Known RBP	4.73	□□□□□ -1.65
NNK1	YKL171W	YCK2	P23292	546 aa	Known RBP	4.73	□□□□□ -1.65
NNK1	YKL171W	PHO91	P27514	894 aa		4.73	□□□□□ -1.65
NNK1	YKL171W	PXL1	P36166	706 aa		4.73	□□□□□ -1.65
NNK1	YKL171W	MNL1	P38888	796 aa		4.73	□□□□□ -1.65
NNK1	YKL171W	RVS167	P39743	482 aa	Known RBP	4.73	□□□□□ -1.65
NNK1	YKL171W	NTA1	P40354	457 aa		4.73	□□□□□ -1.65
NNK1	YKL171W	YFL052W	P43551	465 aa		4.73	□□□□□ -1.65
NNK1	YKL171W	CAF16	P43569	289 aa		4.73	□□□□□ -1.65
NNK1	YKL171W	PIB2	P53191	635 aa		4.73	□□□□□ -1.65
NNK1	YKL171W	CPR6	P53691	371 aa	Known RBP	4.73	□□□□□ -1.65
NNK1	YKL171W	MRPL13	Q02204	264 aa		4.73	□□□□□ -1.65
NNK1	YKL171W	RSM28	Q03430	361 aa		4.73	□□□□□ -1.65
NNK1	YKL171W	MSC3	Q05812	728 aa		4.73	□□□□□ -1.65
NNK1	YKL171W	BOP2	Q06150	570 aa		4.73	□□□□□ -1.65
NNK1	YKL171W	RPS9A	O13516	197 aa	Known RBP	4.72	□□□□□ -1.65
NNK1	YKL171W	RPS9B	P05755	195 aa	Known RBP	4.72	□□□□□ -1.65
NNK1	YKL171W	ADE3	P07245	946 aa	Known RBP	4.72	□□□□□ -1.65
NNK1	YKL171W	PHO11	P35842	467 aa		4.72	□□□□□ -1.65
NNK1	YKL171W	HEL1	P36113	551 aa		4.72	□□□□□ -1.65
NNK1	YKL171W	DAD2	P36162	133 aa		4.72	□□□□□ -1.65
NNK1	YKL171W	ADH5	P38113	351 aa	Known RBP	4.72	□□□□□ -1.65
NNK1	YKL171W	PHO12	P38693	467 aa		4.72	□□□□□ -1.65
NNK1	YKL171W	PAN5	P38787	379 aa		4.72	□□□□□ -1.65
NNK1	YKL171W	HXT6	P39003	570 aa	Known RBP	4.72	□□□□□ -1.65
NNK1	YKL171W	HXT7	P39004	570 aa		4.72	□□□□□ -1.65
NNK1	YKL171W	KTR6	P54070	446 aa		4.72	□□□□□ -1.65
NNK1	YKL171W	MUB1	Q03162	620 aa		4.72	□□□□□ -1.65
NNK1	YKL171W	ERB1	Q04660	807 aa	Known RBP	4.72	□□□□□ -1.65
NNK1	YKL171W	AIM32	Q04689	311 aa		4.72	□□□□□ -1.65
NNK1	YKL171W	HDA2	Q06629	674 aa		4.72	□□□□□ -1.65
NNK1	YKL171W	PML1	Q07930	204 aa	Predicted RBP	4.72	□□□□□ -1.65
NNK1	YKL171W	NBA1	Q08229	501 aa	Known RBP	4.72	□□□□□ -1.65
NNK1	YKL171W	HER1	Q12276	1246 aa		4.72	□□□□□ -1.65
NNK1	YKL171W	SEC39	Q12745	709 aa		4.72	□□□□□ -1.65
NNK1	YKL171W	TDH1	P00360	332 aa	Known RBP	4.72	□□□□□ -1.65
NNK1	YKL171W	TPK1	P06244	397 aa		4.72	□□□□□ -1.65
NNK1	YKL171W	RPS6A	P0CX37	236 aa	Known RBP	4.72	□□□□□ -1.65
NNK1	YKL171W	RPS6B	P0CX38	236 aa	Predicted RBP	4.72	□□□□□ -1.65
NNK1	YKL171W	SYP1	P25623	870 aa	Known RBP	4.72	□□□□□ -1.65
NNK1	YKL171W	SAC6	P32599	642 aa	Known RBP	4.72	□□□□□ -1.65
NNK1	YKL171W	MSN4	P33749	630 aa		4.72	□□□□□ -1.65
NNK1	YKL171W	BEM4	P39011	633 aa		4.72	□□□□□ -1.65
NNK1	YKL171W	ASK10	P48361	1146 aa		4.72	□□□□□ -1.65
NNK1	YKL171W	GRX6	Q12438	231 aa		4.72	□□□□□ -1.65
NNK1	YKL171W	CET1	O13297	549 aa	Predicted RBP	4.71	□□□□□ -1.65
NNK1	YKL171W	PRD1	P25375	712 aa		4.71	□□□□□ -1.65
NNK1	YKL171W	KAP122	P32767	1081 aa		4.71	□□□□□ -1.65
NNK1	YKL171W	TOM71	P38825	639 aa	Known RBP	4.71	□□□□□ -1.65
NNK1	YKL171W	GIP4	P39732	760 aa		4.71	□□□□□ -1.65
NNK1	YKL171W	SPO22	P40511	975 aa		4.71	□□□□□ -1.65
NNK1	YKL171W	MND2	P40577	368 aa		4.71	□□□□□ -1.65
NNK1	YKL171W	CTF18	P49956	741 aa		4.71	□□□□□ -1.65
NNK1	YKL171W	PAN2	P53010	1115 aa	Predicted RBP	4.71	□□□□□ -1.65
NNK1	YKL171W	DSD1	P53095	428 aa		4.71	□□□□□ -1.65
NNK1	YKL171W	CGR1	P53188	120 aa		4.71	□□□□□ -1.65
NNK1	YKL171W	EGD1	Q02642	157 aa	Known RBP	4.71	□□□□□ -1.65
NNK1	YKL171W	PEX29	Q03370	554 aa		4.71	□□□□□ -1.65
NNK1	YKL171W	SEG1	Q04279	960 aa		4.71	□□□□□ -1.65
NNK1	YKL171W	SPE3	Q12074	293 aa	Known RBP	4.71	□□□□□ -1.65
NNK1	YKL171W	APM4	Q99186	491 aa		4.71	□□□□□ -1.65
NNK1	YKL171W	XRN1	P22147	1528 aa	Known RBP	4.71	□□□□□ -1.65
NNK1	YKL171W	GCN4	P03069	281 aa		4.71	□□□□□ -1.66
NNK1	YKL171W	PRB1	P09232	635 aa		4.71	□□□□□ -1.66
NNK1	YKL171W	RPS21A	P0C0V8	87 aa	Known RBP	4.71	□□□□□ -1.66
NNK1	YKL171W	HEM13	P11353	328 aa	Known RBP	4.71	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 144 ms