RNA–Protein interactions for RNA: YIL061C

SNP1, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNP1, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNP1YIL061C DSN1P40568 576 aa7.97□□□□□ -1.13
SNP1YIL061C MKT1P40850 830 aaKnown RBP7.97□□□□□ -1.13
SNP1YIL061C SAE2P46946 345 aa7.97□□□□□ -1.13
SNP1YIL061C ZIP2P53061 704 aa7.97□□□□□ -1.13
SNP1YIL061C SLG1P54867 378 aa7.97□□□□□ -1.13
SNP1YIL061C VPS72Q03388 795 aa7.97□□□□□ -1.13
SNP1YIL061C MSH6Q03834 1242 aa7.97□□□□□ -1.13
SNP1YIL061C SDH5Q08230 162 aa7.97□□□□□ -1.13
SNP1YIL061C YRR1Q12172 810 aa7.97□□□□□ -1.13
SNP1YIL061C CDC24P11433 854 aaPredicted RBP7.96□□□□□ -1.14
SNP1YIL061C MRPL25P23369 157 aa7.96□□□□□ -1.14
SNP1YIL061C YCR015CP25616 317 aa7.96□□□□□ -1.14
SNP1YIL061C KIP2P28743 706 aa7.96□□□□□ -1.14
SNP1YIL061C FRE1P32791 686 aa7.96□□□□□ -1.14
SNP1YIL061C PEX2P32800 271 aa7.96□□□□□ -1.14
SNP1YIL061C SPC97P38863 823 aa7.96□□□□□ -1.14
SNP1YIL061C SAW1P39735 261 aa7.96□□□□□ -1.14
SNP1YIL061C ALD5P40047 520 aaKnown RBP7.96□□□□□ -1.14
SNP1YIL061C RPT2P40327 437 aaKnown RBP7.96□□□□□ -1.14
SNP1YIL061C ALA1P40825 983 aaKnown RBP7.96□□□□□ -1.14
SNP1YIL061C ALY2P47029 1046 aa7.96□□□□□ -1.14
SNP1YIL061C RSM7P47150 247 aa7.96□□□□□ -1.14
SNP1YIL061C AZR1P50080 613 aa7.96□□□□□ -1.14
SNP1YIL061C YNL134CP53912 376 aaKnown RBP7.96□□□□□ -1.14
SNP1YIL061C TIF35Q04067 274 aaKnown RBP7.96□□□□□ -1.14
SNP1YIL061C MDM38Q08179 573 aa7.96□□□□□ -1.14
SNP1YIL061C DNL4Q08387 944 aaPredicted RBP7.96□□□□□ -1.14
SNP1YIL061C SRF1Q12516 437 aa7.96□□□□□ -1.14
SNP1YIL061C RIF1P29539 1916 aa7.95□□□□□ -1.14
SNP1YIL061C TPK1P06244 397 aa7.95□□□□□ -1.14
SNP1YIL061C CMD1P06787 147 aaKnown RBP7.95□□□□□ -1.14
SNP1YIL061C PRP16P15938 1071 aaPredicted RBP7.95□□□□□ -1.14
SNP1YIL061C KAR4P25583 335 aa7.95□□□□□ -1.14
SNP1YIL061C TBS1P38114 1094 aa7.95□□□□□ -1.14
SNP1YIL061C YHL026CP38740 315 aa7.95□□□□□ -1.14
SNP1YIL061C AFG3P39925 761 aa7.95□□□□□ -1.14
SNP1YIL061C TDA10P42938 290 aa7.95□□□□□ -1.14
SNP1YIL061C ELP3Q02908 557 aaKnown RBP7.95□□□□□ -1.14
SNP1YIL061C FMP25Q08023 583 aa7.95□□□□□ -1.14
SNP1YIL061C YOR022CQ12204 715 aa7.95□□□□□ -1.14
SNP1YIL061C MDM20Q12387 796 aaKnown RBP7.95□□□□□ -1.14
SNP1YIL061C ILS1P09436 1072 aaKnown RBP7.94□□□□□ -1.14
SNP1YIL061C IMA3P0CW40 589 aa7.94□□□□□ -1.14
SNP1YIL061C IMA4P0CW41 589 aa7.94□□□□□ -1.14
SNP1YIL061C TIF1P10081 395 aaKnown RBP7.94□□□□□ -1.14
SNP1YIL061C RSA4P25382 515 aaKnown RBP7.94□□□□□ -1.14
SNP1YIL061C NIP1P32497 812 aaKnown RBP7.94□□□□□ -1.14
SNP1YIL061C PAM1P37304 830 aaKnown RBP7.94□□□□□ -1.14
SNP1YIL061C YBR032WP38223 100 aa7.94□□□□□ -1.14
SNP1YIL061C TVP23P38962 199 aa7.94□□□□□ -1.14
SNP1YIL061C PSF2P40359 213 aa7.94□□□□□ -1.14
SNP1YIL061C POL31P46957 487 aa7.94□□□□□ -1.14
SNP1YIL061C GCV2P49095 1034 aa7.94□□□□□ -1.14
SNP1YIL061C STB4P50104 949 aa7.94□□□□□ -1.14
SNP1YIL061C LSC1P53598 329 aaKnown RBP7.94□□□□□ -1.14
SNP1YIL061C YPL062WQ02781 134 aa7.94□□□□□ -1.14
SNP1YIL061C MUB1Q03162 620 aa7.94□□□□□ -1.14
SNP1YIL061C IMA2Q08295 589 aa7.94□□□□□ -1.14
SNP1YIL061C YPL225WQ08971 146 aaKnown RBP7.94□□□□□ -1.14
SNP1YIL061C LDB19Q12502 818 aa7.94□□□□□ -1.14
SNP1YIL061C IZH4Q99393 312 aa7.94□□□□□ -1.14
SNP1YIL061C GAC1P28006 793 aa7.93□□□□□ -1.14
SNP1YIL061C BIO2P32451 375 aa7.93□□□□□ -1.14
SNP1YIL061C DRE2P36152 348 aa7.93□□□□□ -1.14
SNP1YIL061C APN2P38207 520 aa7.93□□□□□ -1.14
SNP1YIL061C YBR062CP38239 180 aa7.93□□□□□ -1.14
SNP1YIL061C DIA4P38705 446 aaPredicted RBP7.93□□□□□ -1.14
SNP1YIL061C YGR283CP53336 341 aaPredicted RBP7.93□□□□□ -1.14
SNP1YIL061C STP1Q00947 519 aa7.93□□□□□ -1.14
SNP1YIL061C NOB1Q08444 459 aaKnown RBP7.93□□□□□ -1.14
SNP1YIL061C THI21Q08975 551 aa7.93□□□□□ -1.14
SNP1YIL061C YOR131CQ12486 218 aa7.93□□□□□ -1.14
SNP1YIL061C VPS3P23643 1011 aa7.92□□□□□ -1.14
SNP1YIL061C LRE1P25579 583 aaKnown RBP7.92□□□□□ -1.14
SNP1YIL061C CDC20P26309 610 aa7.92□□□□□ -1.14
SNP1YIL061C URA7P28274 579 aaKnown RBP7.92□□□□□ -1.14
SNP1YIL061C SMF2P38778 549 aa7.92□□□□□ -1.14
SNP1YIL061C CKB2P38930 258 aa7.92□□□□□ -1.14
SNP1YIL061C AVT2P39981 480 aa7.92□□□□□ -1.14
SNP1YIL061C SCC4P40090 624 aa7.92□□□□□ -1.14
SNP1YIL061C INP51P40559 946 aaKnown RBP7.92□□□□□ -1.14
SNP1YIL061C MND2P40577 368 aa7.92□□□□□ -1.14
SNP1YIL061C PFD1P46988 109 aa7.92□□□□□ -1.14
SNP1YIL061C RFX1P48743 811 aa7.92□□□□□ -1.14
SNP1YIL061C RTA1P53047 317 aa7.92□□□□□ -1.14
SNP1YIL061C KTR5P53966 522 aaPredicted RBP7.92□□□□□ -1.14
SNP1YIL061C SLT2Q00772 484 aa7.92□□□□□ -1.14
SNP1YIL061C ADA2Q02336 434 aa7.92□□□□□ -1.14
SNP1YIL061C VPS16Q03308 798 aa7.92□□□□□ -1.14
SNP1YIL061C ADE13Q05911 482 aaKnown RBP7.92□□□□□ -1.14
SNP1YIL061C TPO1Q07824 586 aa7.92□□□□□ -1.14
SNP1YIL061C CMS1Q07897 291 aaKnown RBP7.92□□□□□ -1.14
SNP1YIL061C APC5Q08683 685 aa7.92□□□□□ -1.14
SNP1YIL061C TSR4P25040 408 aa7.91□□□□□ -1.14
SNP1YIL061C FUB1P25659 250 aa7.91□□□□□ -1.14
SNP1YIL061C HXT3P32466 567 aaKnown RBP7.91□□□□□ -1.14
SNP1YIL061C SLA2P33338 968 aa7.91□□□□□ -1.14
SNP1YIL061C HEL1P36113 551 aa7.91□□□□□ -1.14
SNP1YIL061C HEK2P38199 381 aaKnown RBP RIP-Chip data7.91□□□□□ -1.14not detected
SNP1YIL061C SHE3P38272 425 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms