RNA–Protein interactions for RNA: YDR504C

SPG3, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG3, Length 384 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG3YDR504C PIH1P38768 344 aa2.54□□□□□ -2
SPG3YDR504C YIP4P53093 235 aa2.54□□□□□ -2
SPG3YDR504C YPT1P01123 206 aaKnown RBP2.53□□□□□ -2
SPG3YDR504C SEC15P22224 910 aa2.53□□□□□ -2
SPG3YDR504C YPT7P32939 208 aa2.53□□□□□ -2
SPG3YDR504C HSL7P38274 827 aa2.53□□□□□ -2
SPG3YDR504C BIT61P47041 543 aa2.53□□□□□ -2
SPG3YDR504C ENT2Q05785 613 aa2.53□□□□□ -2
SPG3YDR504C FLC1Q08967 793 aa2.53□□□□□ -2
SPG3YDR504C RPS9BP05755 195 aaKnown RBP2.52□□□□□ -2.01
SPG3YDR504C GSY2P27472 705 aa2.52□□□□□ -2.01
SPG3YDR504C MRPL7P36519 292 aa2.52□□□□□ -2.01
SPG3YDR504C THI6P41835 540 aa2.52□□□□□ -2.01
SPG3YDR504C YGL260WP53056 76 aa2.52□□□□□ -2.01
SPG3YDR504C COQ6P53318 479 aa2.52□□□□□ -2.01
SPG3YDR504C RDL1Q12305 139 aaKnown RBP2.52□□□□□ -2.01
SPG3YDR504C CAN1P04817 590 aa2.51□□□□□ -2.01
SPG3YDR504C YEL076C-AP0CX16 216 aa2.51□□□□□ -2.01
SPG3YDR504C YLR464WP0CX17 216 aa2.51□□□□□ -2.01
SPG3YDR504C YEL076CP39971 216 aa2.51□□□□□ -2.01
SPG3YDR504C YFL015CP43578 164 aa2.51□□□□□ -2.01
SPG3YDR504C AAT1Q01802 451 aa2.51□□□□□ -2.01
SPG3YDR504C NRT1Q08485 598 aa2.51□□□□□ -2.01
SPG3YDR504C YMR084WA2P2R3 262 aa2.5□□□□□ -2.01
SPG3YDR504C KIN82P25341 720 aa2.5□□□□□ -2.01
SPG3YDR504C STO1P34160 861 aaKnown RBP2.5□□□□□ -2.01
SPG3YDR504C RPL15BP54780 204 aaPredicted RBP2.5□□□□□ -2.01
SPG3YDR504C SNP1Q00916 300 aaPredicted RBP2.5□□□□□ -2.01
SPG3YDR504C AIM44Q99299 758 aa2.5□□□□□ -2.01
SPG3YDR504C MNN4P36044 1178 aa2.49□□□□□ -2.01
SPG3YDR504C CFD1P40558 293 aa2.49□□□□□ -2.01
SPG3YDR504C COP1P53622 1201 aaKnown RBP2.49□□□□□ -2.01
SPG3YDR504C NHX1Q04121 633 aa2.49□□□□□ -2.01
SPG3YDR504C TPO3Q06451 622 aa2.49□□□□□ -2.01
SPG3YDR504C WHI2P12611 486 aa2.48□□□□□ -2.01
SPG3YDR504C CNE1P27825 502 aa2.48□□□□□ -2.01
SPG3YDR504C SSZ1P38788 538 aaKnown RBP2.48□□□□□ -2.01
SPG3YDR504C YHR202WP38887 602 aa2.48□□□□□ -2.01
SPG3YDR504C TMN3P40071 706 aa2.48□□□□□ -2.01
SPG3YDR504C CAF16P43569 289 aa2.48□□□□□ -2.01
SPG3YDR504C MFM1Q02783 413 aa2.48□□□□□ -2.01
SPG3YDR504C YDL073WQ07454 984 aa2.48□□□□□ -2.01
SPG3YDR504C VHS3Q08438 674 aa2.48□□□□□ -2.01
SPG3YDR504C PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
SPG3YDR504C FRS1P15624 595 aaKnown RBP2.47□□□□□ -2.01
SPG3YDR504C YCR043CP25361 127 aa2.47□□□□□ -2.01
SPG3YDR504C ARC40P38328 384 aaKnown RBP2.47□□□□□ -2.01
SPG3YDR504C PPE1P38796 400 aa2.47□□□□□ -2.01
SPG3YDR504C CDC9P04819 755 aa2.46□□□□□ -2.02
SPG3YDR504C AIM17P23180 465 aaKnown RBP2.46□□□□□ -2.02
SPG3YDR504C YBR139WP38109 508 aa2.46□□□□□ -2.02
SPG3YDR504C GND1P38720 489 aaKnown RBP2.46□□□□□ -2.02
SPG3YDR504C GDH3P39708 457 aa2.46□□□□□ -2.02
SPG3YDR504C YIR016WP40572 265 aa2.46□□□□□ -2.02
SPG3YDR504C SAE2P46946 345 aa2.46□□□□□ -2.02
SPG3YDR504C MDV1P47025 714 aa2.46□□□□□ -2.02
SPG3YDR504C BUD17P53727 317 aa2.46□□□□□ -2.02
SPG3YDR504C RCR2Q03446 210 aaKnown RBP2.46□□□□□ -2.02
SPG3YDR504C SPN1Q06505 410 aaPredicted RBP2.46□□□□□ -2.02
SPG3YDR504C CIT2P08679 460 aa2.45□□□□□ -2.02
SPG3YDR504C YIL152WP40455 235 aa2.45□□□□□ -2.02
SPG3YDR504C YPL071CQ02864 156 aa2.45□□□□□ -2.02
SPG3YDR504C EFR3Q03653 782 aaKnown RBP2.45□□□□□ -2.02
SPG3YDR504C GRS2Q06817 618 aa2.45□□□□□ -2.02
SPG3YDR504C YPL216WQ08964 1102 aa2.45□□□□□ -2.02
SPG3YDR504C RNR3P21672 869 aaKnown RBP2.44□□□□□ -2.02
SPG3YDR504C SRP40P32583 406 aaPredicted RBP2.44□□□□□ -2.02
SPG3YDR504C PET127P32606 800 aa2.44□□□□□ -2.02
SPG3YDR504C MTG2P38860 518 aa2.44□□□□□ -2.02
SPG3YDR504C NUG1P40010 520 aaKnown RBP2.44□□□□□ -2.02
SPG3YDR504C IRC7P43623 340 aa2.44□□□□□ -2.02
SPG3YDR504C MAL11P53048 616 aa2.44□□□□□ -2.02
SPG3YDR504C VBA4Q04602 768 aaKnown RBP2.44□□□□□ -2.02
SPG3YDR504C RTT103Q05543 409 aa2.44□□□□□ -2.02
SPG3YDR504C YMR230W-AQ3E7B5 62 aa2.44□□□□□ -2.02
SPG3YDR504C HOG1P32485 435 aa2.43□□□□□ -2.02
SPG3YDR504C FMP46P36141 133 aaKnown RBP2.43□□□□□ -2.02
SPG3YDR504C TES1P41903 349 aaKnown RBP2.43□□□□□ -2.02
SPG3YDR504C TDA10P42938 290 aa2.43□□□□□ -2.02
SPG3YDR504C YJR039WP47107 1121 aa2.43□□□□□ -2.02
SPG3YDR504C HUL5P53119 910 aa2.43□□□□□ -2.02
SPG3YDR504C BOP3P53958 396 aa2.43□□□□□ -2.02
SPG3YDR504C RPS15Q01855 142 aaKnown RBP2.43□□□□□ -2.02
SPG3YDR504C TIM50Q02776 476 aa2.43□□□□□ -2.02
SPG3YDR504C IMG2P25642 146 aaPredicted RBP2.42□□□□□ -2.02
SPG3YDR504C DCS2Q12123 353 aa2.42□□□□□ -2.02
SPG3YDR504C ACO1P19414 778 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
SPG3YDR504C GAL11P19659 1081 aa2.41□□□□□ -2.02
SPG3YDR504C RTT107P38850 1070 aa2.41□□□□□ -2.02
SPG3YDR504C SAP4P53036 818 aa2.41□□□□□ -2.02
SPG3YDR504C YGR054WP53235 642 aaKnown RBP2.41□□□□□ -2.02
SPG3YDR504C WAR1Q03631 944 aa2.41□□□□□ -2.02
SPG3YDR504C YMR317WQ04893 1140 aa2.41□□□□□ -2.02
SPG3YDR504C PCL8Q08966 492 aa2.41□□□□□ -2.02
SPG3YDR504C COQ3P27680 312 aa2.4□□□□□ -2.03
SPG3YDR504C GPD1Q00055 391 aaKnown RBP2.4□□□□□ -2.03
SPG3YDR504C CEF1Q03654 590 aaPredicted RBP2.4□□□□□ -2.03
SPG3YDR504C GFD1Q04839 188 aaKnown RBP2.4□□□□□ -2.03
SPG3YDR504C DSE3Q08729 430 aa2.4□□□□□ -2.03
SPG3YDR504C IME1P21190 360 aa2.39□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 37.5 ms