RNA–Protein interactions for RNA: YDR254W

CHL4, Transcript of Outer kinetochore protein required for chromosome stability, yeast

Gene CHL4, Length 1,377 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHL4	YDR254W	SHM2	P37291	469 aa	Known RBP	6.26	□□□□□ -1.41
CHL4	YDR254W	EXO5	P38289	585 aa		6.26	□□□□□ -1.41
CHL4	YDR254W	YBR225W	P38321	900 aa		6.26	□□□□□ -1.41
CHL4	YDR254W	AXL2	P38928	823 aa		6.26	□□□□□ -1.41
CHL4	YDR254W	YJL070C	P40361	888 aa		6.26	□□□□□ -1.41
CHL4	YDR254W	UTP18	P40362	594 aa	Predicted RBP	6.26	□□□□□ -1.41
CHL4	YDR254W	NNF2	P53253	936 aa		6.26	□□□□□ -1.41
CHL4	YDR254W	YGR266W	P53326	701 aa		6.26	□□□□□ -1.41
CHL4	YDR254W	DSL1	P53847	754 aa		6.26	□□□□□ -1.41
CHL4	YDR254W	GIM3	P53900	129 aa		6.26	□□□□□ -1.41
CHL4	YDR254W	TEP1	P53916	434 aa		6.26	□□□□□ -1.41
CHL4	YDR254W	YLR345W	Q06137	509 aa		6.26	□□□□□ -1.41
CHL4	YDR254W	VHS3	Q08438	674 aa		6.26	□□□□□ -1.41
CHL4	YDR254W	PDH1	Q12428	516 aa	Known RBP	6.26	□□□□□ -1.41
CHL4	YDR254W	RVB2	Q12464	471 aa	Known RBP	6.26	□□□□□ -1.41
CHL4	YDR254W	MIH1	P23748	554 aa		6.25	□□□□□ -1.41
CHL4	YDR254W	RRP7	P25368	297 aa	Predicted RBP	6.25	□□□□□ -1.41
CHL4	YDR254W	MRP4	P32902	394 aa		6.25	□□□□□ -1.41
CHL4	YDR254W	WHI3	P34761	661 aa	Known RBP	6.25	□□□□□ -1.41
CHL4	YDR254W	HSL7	P38274	827 aa		6.25	□□□□□ -1.41
CHL4	YDR254W	GND1	P38720	489 aa	Known RBP	6.25	□□□□□ -1.41
CHL4	YDR254W	PPE1	P38796	400 aa		6.25	□□□□□ -1.41
CHL4	YDR254W	MTG2	P38860	518 aa		6.25	□□□□□ -1.41
CHL4	YDR254W	SWD1	P39706	426 aa		6.25	□□□□□ -1.41
CHL4	YDR254W	LTP1	P40347	161 aa		6.25	□□□□□ -1.41
CHL4	YDR254W	ARF3	P40994	183 aa	RIP-Chip data	6.25	□□□□□ -1.41	not detected
CHL4	YDR254W	SHE4	P51534	789 aa		6.25	□□□□□ -1.41
CHL4	YDR254W	NCS6	P53088	359 aa		6.25	□□□□□ -1.41
CHL4	YDR254W	EFM5	P53200	248 aa	Known RBP	6.25	□□□□□ -1.41
CHL4	YDR254W	EOS1	P53938	366 aa		6.25	□□□□□ -1.41
CHL4	YDR254W	MOT3	P54785	490 aa	Known RBP	6.25	□□□□□ -1.41
CHL4	YDR254W	YPL107W	Q02873	248 aa		6.25	□□□□□ -1.41
CHL4	YDR254W	YML119W	Q03208	357 aa		6.25	□□□□□ -1.41
CHL4	YDR254W	SKY1	Q03656	742 aa		6.25	□□□□□ -1.41
CHL4	YDR254W	ECM38	Q05902	660 aa	Predicted RBP	6.25	□□□□□ -1.41
CHL4	YDR254W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	6.25	□□□□□ -1.41	not detected
CHL4	YDR254W	YOR059C	Q08448	450 aa	Known RBP	6.25	□□□□□ -1.41
CHL4	YDR254W	MDY2	Q12285	212 aa		6.25	□□□□□ -1.41
CHL4	YDR254W	ARP7	Q12406	477 aa		6.25	□□□□□ -1.41
CHL4	YDR254W	MET17	P06106	444 aa		6.24	□□□□□ -1.41
CHL4	YDR254W	STE50	P25344	346 aa		6.24	□□□□□ -1.41
CHL4	YDR254W	RMA1	P36001	430 aa	Known RBP	6.24	□□□□□ -1.41
CHL4	YDR254W	YKT6	P36015	200 aa	Known RBP	6.24	□□□□□ -1.41
CHL4	YDR254W	GPT2	P36148	743 aa		6.24	□□□□□ -1.41
CHL4	YDR254W	YBR284W	P38150	797 aa		6.24	□□□□□ -1.41
CHL4	YDR254W	PEX28	P38848	579 aa		6.24	□□□□□ -1.41
CHL4	YDR254W	MBP1	P39678	833 aa		6.24	□□□□□ -1.41
CHL4	YDR254W	AIM10	P39965	576 aa	Known RBP	6.24	□□□□□ -1.41
CHL4	YDR254W	LSC1	P53598	329 aa	Known RBP	6.24	□□□□□ -1.41
CHL4	YDR254W	ARC35	P53731	342 aa	Known RBP	6.24	□□□□□ -1.41
CHL4	YDR254W	YNR061C	P53747	219 aa		6.24	□□□□□ -1.41
CHL4	YDR254W	YNR068C	P53754	272 aa		6.24	□□□□□ -1.41
CHL4	YDR254W	CBK1	P53894	756 aa		6.24	□□□□□ -1.41
CHL4	YDR254W	RCM1	P53972	490 aa		6.24	□□□□□ -1.41
CHL4	YDR254W	NOG1	Q02892	647 aa	Known RBP	6.24	□□□□□ -1.41
CHL4	YDR254W	RRB1	Q04225	511 aa	Known RBP	6.24	□□□□□ -1.41
CHL4	YDR254W	NOP6	Q07623	225 aa	Known RBP	6.24	□□□□□ -1.41
CHL4	YDR254W	YPR027C	Q12079	277 aa		6.24	□□□□□ -1.41
CHL4	YDR254W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	6.23	□□□□□ -1.41	not detected
CHL4	YDR254W	SUP35	P05453	685 aa	Known RBP	6.23	□□□□□ -1.41
CHL4	YDR254W	INO1	P11986	533 aa		6.23	□□□□□ -1.41
CHL4	YDR254W	ENA1	P13587	1091 aa		6.23	□□□□□ -1.41
CHL4	YDR254W	GUK1	P15454	187 aa	Known RBP	6.23	□□□□□ -1.41
CHL4	YDR254W	CLN1	P20437	546 aa		6.23	□□□□□ -1.41
CHL4	YDR254W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	6.23	□□□□□ -1.41	not detected
CHL4	YDR254W	SQT1	P35184	431 aa		6.23	□□□□□ -1.41
CHL4	YDR254W	YBR238C	P38330	731 aa	Known RBP	6.23	□□□□□ -1.41
CHL4	YDR254W	PCM1	P38628	557 aa	Known RBP	6.23	□□□□□ -1.41
CHL4	YDR254W	NPR2	P39923	615 aa		6.23	□□□□□ -1.41
CHL4	YDR254W	ALG2	P43636	503 aa		6.23	□□□□□ -1.41
CHL4	YDR254W	RSM26	P47141	266 aa		6.23	□□□□□ -1.41
CHL4	YDR254W	RPN14	P53196	417 aa		6.23	□□□□□ -1.41
CHL4	YDR254W	ARE2	P53629	642 aa	Known RBP	6.23	□□□□□ -1.41
CHL4	YDR254W	JJJ1	P53863	590 aa		6.23	□□□□□ -1.41
CHL4	YDR254W	DAK1	P54838	584 aa	Known RBP	6.23	□□□□□ -1.41
CHL4	YDR254W	PEX13	P80667	386 aa		6.23	□□□□□ -1.41
CHL4	YDR254W	ENA2	Q01896	1091 aa		6.23	□□□□□ -1.41
CHL4	YDR254W	HLR1	Q04429	423 aa		6.23	□□□□□ -1.41
CHL4	YDR254W	VID22	Q05934	901 aa		6.23	□□□□□ -1.41
CHL4	YDR254W	ETT1	Q08421	412 aa	Known RBP	6.23	□□□□□ -1.41
CHL4	YDR254W	KCS1	Q12494	1050 aa		6.23	□□□□□ -1.41
CHL4	YDR254W	ENA5	Q12691	1091 aa		6.23	□□□□□ -1.41
CHL4	YDR254W	ADF1	Q2V2Q1	113 aa		6.23	□□□□□ -1.41
CHL4	YDR254W	YLR358C	O13565	187 aa		6.22	□□□□□ -1.41
CHL4	YDR254W	ARG3	P05150	338 aa		6.22	□□□□□ -1.41
CHL4	YDR254W	SNF1	P06782	633 aa	Known RBP	6.22	□□□□□ -1.41
CHL4	YDR254W	DMC1	P25453	334 aa		6.22	□□□□□ -1.41
CHL4	YDR254W	SGF29	P25554	259 aa		6.22	□□□□□ -1.41
CHL4	YDR254W	MGM1	P32266	881 aa		6.22	□□□□□ -1.41
CHL4	YDR254W	DPH5	P32469	300 aa	Predicted RBP	6.22	□□□□□ -1.41
CHL4	YDR254W	KRE6	P32486	720 aa		6.22	□□□□□ -1.41
CHL4	YDR254W	NGG1	P32494	702 aa		6.22	□□□□□ -1.41
CHL4	YDR254W	GYP6	P32806	458 aa		6.22	□□□□□ -1.41
CHL4	YDR254W	YMR124W	P39523	943 aa	Known RBP	6.22	□□□□□ -1.41
CHL4	YDR254W	OSW5	P40219	148 aa		6.22	□□□□□ -1.41
CHL4	YDR254W	NOP9	P47077	666 aa	Known RBP	6.22	□□□□□ -1.41
CHL4	YDR254W	ASK10	P48361	1146 aa		6.22	□□□□□ -1.41
CHL4	YDR254W	TRF5	P48561	642 aa	Known RBP	6.22	□□□□□ -1.41
CHL4	YDR254W	UTP22	P53254	1237 aa	Predicted RBP	6.22	□□□□□ -1.41
CHL4	YDR254W	ARP5	P53946	755 aa		6.22	□□□□□ -1.41

Retrieved 100 of 5,963 RNA–protein pairs in 237.9 ms