RNA–Protein interactions for RNA: YDR054C

CDC34, Transcript of Ubiquitin-conjugating enzyme (E2), yeastyeast

Gene CDC34, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC34YDR054C RME1P32338 300 aaKnown RBP6.55□□□□□ -1.36
CDC34YDR054C SPC110P32380 944 aa6.55□□□□□ -1.36
CDC34YDR054C NIP100P33420 868 aa6.55□□□□□ -1.36
CDC34YDR054C VID24P38263 362 aa6.55□□□□□ -1.36
CDC34YDR054C AFG3P39925 761 aa6.55□□□□□ -1.36
CDC34YDR054C STU2P46675 888 aa6.55□□□□□ -1.36
CDC34YDR054C MNP1P53163 194 aaPredicted RBP6.55□□□□□ -1.36
CDC34YDR054C CUL3P53202 744 aa6.55□□□□□ -1.36
CDC34YDR054C PBP1P53297 722 aaKnown RBP6.55□□□□□ -1.36
CDC34YDR054C DAK1P54838 584 aaKnown RBP6.55□□□□□ -1.36
CDC34YDR054C YML131WQ03102 365 aa6.55□□□□□ -1.36
CDC34YDR054C DFG5Q05031 458 aa6.55□□□□□ -1.36
CDC34YDR054C DON1Q05610 365 aa6.55□□□□□ -1.36
CDC34YDR054C YLR297WQ05899 129 aa6.55□□□□□ -1.36
CDC34YDR054C TSR2Q06672 205 aaKnown RBP6.55□□□□□ -1.36
CDC34YDR054C RLP24Q07915 199 aaKnown RBP6.55□□□□□ -1.36
CDC34YDR054C ZPS1Q12512 249 aa6.55□□□□□ -1.36
CDC34YDR054C HBN1Q96VH4 193 aa6.55□□□□□ -1.36
CDC34YDR054C TY4B-PA0A0B7P3V8 1104 aa6.54□□□□□ -1.36
CDC34YDR054C SWI6P09959 803 aa6.54□□□□□ -1.36
CDC34YDR054C PET123P17558 318 aa6.54□□□□□ -1.36
CDC34YDR054C AEP2P22136 580 aa6.54□□□□□ -1.36
CDC34YDR054C MKK2P32491 506 aa6.54□□□□□ -1.36
CDC34YDR054C SWI3P32591 825 aa6.54□□□□□ -1.36
CDC34YDR054C YKL107WP34251 309 aa6.54□□□□□ -1.36
CDC34YDR054C YTA6P40328 754 aa6.54□□□□□ -1.36
CDC34YDR054C SAP185P40856 1058 aa6.54□□□□□ -1.36
CDC34YDR054C MMM1P41800 426 aa6.54□□□□□ -1.36
CDC34YDR054C RPS0BP46654 252 aaKnown RBP6.54□□□□□ -1.36
CDC34YDR054C ASN1P49089 572 aaKnown RBP6.54□□□□□ -1.36
CDC34YDR054C HSH155P49955 971 aaKnown RBP6.54□□□□□ -1.36
CDC34YDR054C HXT15P54854 567 aa6.54□□□□□ -1.36
CDC34YDR054C MEH1Q02205 184 aa6.54□□□□□ -1.36
CDC34YDR054C SYH1Q02875 849 aaKnown RBP6.54□□□□□ -1.36
CDC34YDR054C MSC2Q03455 724 aa6.54□□□□□ -1.36
CDC34YDR054C SPC19Q03954 165 aa6.54□□□□□ -1.36
CDC34YDR054C CSR1Q06705 408 aaKnown RBP6.54□□□□□ -1.36
CDC34YDR054C YPR078CQ06813 372 aa6.54□□□□□ -1.36
CDC34YDR054C NEW1Q08972 1196 aaKnown RBP6.54□□□□□ -1.36
CDC34YDR054C PLP2Q12017 286 aa6.54□□□□□ -1.36
CDC34YDR054C OSW2Q12202 724 aa6.54□□□□□ -1.36
CDC34YDR054C BMT6Q12291 365 aa6.54□□□□□ -1.36
CDC34YDR054C TY4A-HQ6Q5P6 413 aa6.54□□□□□ -1.36
CDC34YDR054C FKS1P38631 1876 aaKnown RBP6.53□□□□□ -1.36
CDC34YDR054C RPL4AP10664 362 aaKnown RBP6.53□□□□□ -1.36
CDC34YDR054C IME1P21190 360 aa6.53□□□□□ -1.36
CDC34YDR054C RAD57P25301 460 aa6.53□□□□□ -1.36
CDC34YDR054C TMT1P32643 299 aa6.53□□□□□ -1.36
CDC34YDR054C KAP122P32767 1081 aa6.53□□□□□ -1.36
CDC34YDR054C STO1P34160 861 aaKnown RBP6.53□□□□□ -1.36
CDC34YDR054C GPT2P36148 743 aa6.53□□□□□ -1.36
CDC34YDR054C APM2P38700 605 aa6.53□□□□□ -1.36
CDC34YDR054C SHU2P38957 223 aa6.53□□□□□ -1.36
CDC34YDR054C NPP2P39997 493 aa6.53□□□□□ -1.36
CDC34YDR054C APT1P49435 187 aaKnown RBP6.53□□□□□ -1.36
CDC34YDR054C RPL4BP49626 362 aaKnown RBP6.53□□□□□ -1.36
CDC34YDR054C YNL165WP53891 406 aa6.53□□□□□ -1.36
CDC34YDR054C ALF1P53904 254 aa6.53□□□□□ -1.36
CDC34YDR054C TRS130Q03660 1102 aa6.53□□□□□ -1.36
CDC34YDR054C SHS1Q07657 551 aa6.53□□□□□ -1.36
CDC34YDR054C PYC2P32327 1180 aaKnown RBP6.52□□□□□ -1.37
CDC34YDR054C DPH2P32461 534 aa6.52□□□□□ -1.37
CDC34YDR054C CBF2P32504 956 aa6.52□□□□□ -1.37
CDC34YDR054C SEC61P32915 480 aa6.52□□□□□ -1.37
CDC34YDR054C DOM34P33309 386 aa6.52□□□□□ -1.37
CDC34YDR054C SET5P38890 526 aaKnown RBP6.52□□□□□ -1.37
CDC34YDR054C MBP1P39678 833 aa6.52□□□□□ -1.37
CDC34YDR054C NDE1P40215 560 aa6.52□□□□□ -1.37
CDC34YDR054C SDS3P40505 327 aa6.52□□□□□ -1.37
CDC34YDR054C INP51P40559 946 aaKnown RBP6.52□□□□□ -1.37
CDC34YDR054C DUG1P43616 481 aaKnown RBP6.52□□□□□ -1.37
CDC34YDR054C COS5P47187 383 aa6.52□□□□□ -1.37
CDC34YDR054C REH1Q06709 432 aa6.52□□□□□ -1.37
CDC34YDR054C COX4P04037 155 aa6.51□□□□□ -1.37
CDC34YDR054C ADE4P04046 510 aaKnown RBP6.51□□□□□ -1.37
CDC34YDR054C WHI2P12611 486 aa6.51□□□□□ -1.37
CDC34YDR054C TOP3P13099 656 aa6.51□□□□□ -1.37
CDC34YDR054C SNA3P14359 133 aa6.51□□□□□ -1.37
CDC34YDR054C DBF20P32328 564 aa6.51□□□□□ -1.37
CDC34YDR054C MSS51P32335 436 aa6.51□□□□□ -1.37
CDC34YDR054C PRP19P32523 503 aaKnown RBP6.51□□□□□ -1.37
CDC34YDR054C DUR3P33413 735 aa6.51□□□□□ -1.37
CDC34YDR054C AMN1P38285 549 aaPredicted RBP6.51□□□□□ -1.37
CDC34YDR054C YMR124WP39523 943 aaKnown RBP6.51□□□□□ -1.37
CDC34YDR054C SAH1P39954 449 aaKnown RBP6.51□□□□□ -1.37
CDC34YDR054C EFM4P40516 257 aa6.51□□□□□ -1.37
CDC34YDR054C MNT3P40549 630 aa6.51□□□□□ -1.37
CDC34YDR054C UBP6P43593 499 aaKnown RBP6.51□□□□□ -1.37
CDC34YDR054C RSC8P43609 557 aaKnown RBP6.51□□□□□ -1.37
CDC34YDR054C SCD6P45978 349 aaKnown RBP RIP-Chip data6.51□□□□□ -1.37not detected
CDC34YDR054C YGL176CP46945 554 aa6.51□□□□□ -1.37
CDC34YDR054C CLA4P48562 842 aa6.51□□□□□ -1.37
CDC34YDR054C BNI4P53858 892 aa6.51□□□□□ -1.37
CDC34YDR054C SNP1Q00916 300 aaPredicted RBP6.51□□□□□ -1.37
CDC34YDR054C UTP5Q04177 643 aaKnown RBP6.51□□□□□ -1.37
CDC34YDR054C YML082WQ04533 649 aaKnown RBP6.51□□□□□ -1.37
CDC34YDR054C SOV1Q04748 898 aa6.51□□□□□ -1.37
CDC34YDR054C ECM7Q06200 448 aa6.51□□□□□ -1.37
CDC34YDR054C RGA2Q06407 1009 aa6.51□□□□□ -1.37
CDC34YDR054C HFI1Q12060 488 aa6.51□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms