RNA–Protein interactions for RNA: YDL185W

VMA1, Transcript of Subunit A of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA1, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA1	YDL185W	RTT10	Q08924	1013 aa		4.16	□□□□□ -1.74
VMA1	YDL185W	APC2	Q12440	853 aa		4.16	□□□□□ -1.74
VMA1	YDL185W	APM4	Q99186	491 aa		4.16	□□□□□ -1.74
VMA1	YDL185W	YEL076C-A	P0CX16	216 aa		4.15	□□□□□ -1.74
VMA1	YDL185W	YLR464W	P0CX17	216 aa		4.15	□□□□□ -1.74
VMA1	YDL185W	HSC82	P15108	705 aa	Known RBP	4.15	□□□□□ -1.74
VMA1	YDL185W	SAN1	P22470	610 aa		4.15	□□□□□ -1.74
VMA1	YDL185W	LCB1	P25045	558 aa	Known RBP	4.15	□□□□□ -1.74
VMA1	YDL185W	GFD2	P25370	566 aa	Known RBP	4.15	□□□□□ -1.74
VMA1	YDL185W	RTG2	P32608	588 aa	Known RBP	4.15	□□□□□ -1.74
VMA1	YDL185W	DUR3	P33413	735 aa		4.15	□□□□□ -1.74
VMA1	YDL185W	MAE1	P36013	669 aa	Known RBP	4.15	□□□□□ -1.74
VMA1	YDL185W	YBR138C	P38277	524 aa		4.15	□□□□□ -1.74
VMA1	YDL185W	YHL050C	P38721	697 aa		4.15	□□□□□ -1.74
VMA1	YDL185W	APE4	P38821	490 aa		4.15	□□□□□ -1.74
VMA1	YDL185W	YEL076C	P39971	216 aa		4.15	□□□□□ -1.74
VMA1	YDL185W	YJL107C	P42947	387 aa		4.15	□□□□□ -1.74
VMA1	YDL185W	FAR7	P43592	221 aa		4.15	□□□□□ -1.74
VMA1	YDL185W	SPC105	P53148	917 aa		4.15	□□□□□ -1.74
VMA1	YDL185W	LSC1	P53598	329 aa	Known RBP	4.15	□□□□□ -1.74
VMA1	YDL185W	HEH2	Q03281	663 aa		4.15	□□□□□ -1.74
VMA1	YDL185W	RMT2	Q03305	412 aa		4.15	□□□□□ -1.74
VMA1	YDL185W	RCF1	Q03713	159 aa		4.15	□□□□□ -1.74
VMA1	YDL185W	SAS4	Q04003	481 aa		4.15	□□□□□ -1.74
VMA1	YDL185W	COX20	Q04935	205 aa		4.15	□□□□□ -1.74
VMA1	YDL185W	DCS1	Q06151	350 aa		4.15	□□□□□ -1.74
VMA1	YDL185W	SEC10	Q06245	871 aa		4.15	□□□□□ -1.74
VMA1	YDL185W	GPI13	Q07830	1017 aa		4.15	□□□□□ -1.74
VMA1	YDL185W	SSP2	Q08646	371 aa		4.15	□□□□□ -1.74
VMA1	YDL185W	SOG2	Q08817	791 aa		4.15	□□□□□ -1.74
VMA1	YDL185W	FAL1	Q12099	399 aa	Known RBP	4.15	□□□□□ -1.74
VMA1	YDL185W	AI5_ALPHA	Q9ZZX1	630 aa		4.15	□□□□□ -1.74
VMA1	YDL185W	KGD2	P19262	463 aa	Predicted RBP	4.15	□□□□□ -1.75
VMA1	YDL185W	HSP60	P19882	572 aa	Known RBP	4.15	□□□□□ -1.75
VMA1	YDL185W	DBP5	P20449	482 aa	Known RBP	4.15	□□□□□ -1.75
VMA1	YDL185W	PRP5	P21372	849 aa	Predicted RBP	4.15	□□□□□ -1.75
VMA1	YDL185W	CAD1	P24813	409 aa	Known RBP	4.15	□□□□□ -1.75
VMA1	YDL185W	YCR016W	P25617	290 aa	Known RBP	4.15	□□□□□ -1.75
VMA1	YDL185W	RPS5	P26783	225 aa	Known RBP	4.15	□□□□□ -1.75
VMA1	YDL185W	TRK2	P28584	889 aa		4.15	□□□□□ -1.75
VMA1	YDL185W	HXT3	P32466	567 aa	Known RBP	4.15	□□□□□ -1.75
VMA1	YDL185W	HBS1	P32769	611 aa	Known RBP	4.15	□□□□□ -1.75
VMA1	YDL185W	YBR285W	P38354	144 aa		4.15	□□□□□ -1.75
VMA1	YDL185W	RRP8	P38961	392 aa	Known RBP	4.15	□□□□□ -1.75
VMA1	YDL185W	SAD1	P43589	448 aa		4.15	□□□□□ -1.75
VMA1	YDL185W	TRF5	P48561	642 aa	Known RBP	4.15	□□□□□ -1.75
VMA1	YDL185W	GCV2	P49095	1034 aa		4.15	□□□□□ -1.75
VMA1	YDL185W	ASE1	P50275	885 aa		4.15	□□□□□ -1.75
VMA1	YDL185W	MON1	P53129	644 aa		4.15	□□□□□ -1.75
VMA1	YDL185W	YTP1	P53584	459 aa		4.15	□□□□□ -1.75
VMA1	YDL185W	YNL108C	P53929	270 aa		4.15	□□□□□ -1.75
VMA1	YDL185W	ORC3	P54790	616 aa		4.15	□□□□□ -1.75
VMA1	YDL185W	RSM28	Q03430	361 aa		4.15	□□□□□ -1.75
VMA1	YDL185W	TCO89	Q08921	799 aa		4.15	□□□□□ -1.75
VMA1	YDL185W	RCN2	Q12044	265 aa		4.15	□□□□□ -1.75
VMA1	YDL185W	NOT5	Q12514	560 aa	Predicted RBP	4.15	□□□□□ -1.75
VMA1	YDL185W	HAA1	Q12753	694 aa	Known RBP	4.15	□□□□□ -1.75
VMA1	YDL185W	BRR1	Q99177	341 aa	Predicted RBP	4.15	□□□□□ -1.75
VMA1	YDL185W	PDE2	P06776	526 aa		4.14	□□□□□ -1.75
VMA1	YDL185W	TIF1	P10081	395 aa	Known RBP	4.14	□□□□□ -1.75
VMA1	YDL185W	STF2	P16965	84 aa		4.14	□□□□□ -1.75
VMA1	YDL185W	TGL4	P36165	910 aa		4.14	□□□□□ -1.75
VMA1	YDL185W	YBR139W	P38109	508 aa		4.14	□□□□□ -1.75
VMA1	YDL185W	KAP104	P38217	918 aa	Known RBP	4.14	□□□□□ -1.75
VMA1	YDL185W	GIP1	P38229	639 aa		4.14	□□□□□ -1.75
VMA1	YDL185W	GCD14	P46959	383 aa	Predicted RBP	4.14	□□□□□ -1.75
VMA1	YDL185W	RSM26	P47141	266 aa		4.14	□□□□□ -1.75
VMA1	YDL185W	UTP8	P53276	713 aa	Known RBP	4.14	□□□□□ -1.75
VMA1	YDL185W	RET3	P53600	189 aa		4.14	□□□□□ -1.75
VMA1	YDL185W	ULP1	Q02724	621 aa		4.14	□□□□□ -1.75
VMA1	YDL185W	ABZ2	Q03266	374 aa		4.14	□□□□□ -1.75
VMA1	YDL185W	YMR027W	Q04371	470 aa		4.14	□□□□□ -1.75
VMA1	YDL185W	BCP1	Q06338	283 aa		4.14	□□□□□ -1.75
VMA1	YDL185W	RRD2	Q12461	358 aa		4.14	□□□□□ -1.75
VMA1	YDL185W	MSD1	P15179	658 aa	Known RBP	4.14	□□□□□ -1.75
VMA1	YDL185W	PDC5	P16467	563 aa	Known RBP	4.14	□□□□□ -1.75
VMA1	YDL185W	PRO3	P32263	286 aa	Known RBP	4.14	□□□□□ -1.75
VMA1	YDL185W	GLN1	P32288	370 aa	Known RBP	4.14	□□□□□ -1.75
VMA1	YDL185W	CLG1	P35190	452 aa		4.14	□□□□□ -1.75
VMA1	YDL185W	EAP1	P36041	632 aa	Known RBP	4.14	□□□□□ -1.75
VMA1	YDL185W	MNN2	P38069	597 aa		4.14	□□□□□ -1.75
VMA1	YDL185W	SWC5	P38326	303 aa		4.14	□□□□□ -1.75
VMA1	YDL185W	GOS1	P38736	223 aa		4.14	□□□□□ -1.75
VMA1	YDL185W	HXT6	P39003	570 aa	Known RBP	4.14	□□□□□ -1.75
VMA1	YDL185W	HXT7	P39004	570 aa		4.14	□□□□□ -1.75
VMA1	YDL185W	IRC5	P43610	853 aa		4.14	□□□□□ -1.75
VMA1	YDL185W	NUT1	P53114	1132 aa		4.14	□□□□□ -1.75
VMA1	YDL185W	YNL058C	P53947	316 aa		4.14	□□□□□ -1.75
VMA1	YDL185W	MCH5	Q08777	521 aa		4.14	□□□□□ -1.75
VMA1	YDL185W	YLR053C	Q12026	108 aa		4.14	□□□□□ -1.75
VMA1	YDL185W	ATG29	Q12092	213 aa		4.14	□□□□□ -1.75
VMA1	YDL185W	YLR278C	Q05854	1341 aa		4.14	□□□□□ -1.75
VMA1	YDL185W	RPN13	O13563	156 aa		4.14	□□□□□ -1.75
VMA1	YDL185W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	RIP-Chip
VMA1	YDL185W	HMG2	P12684	1045 aa		4.14	□□□□□ -1.75
VMA1	YDL185W	SEC2	P17065	759 aa		4.14	□□□□□ -1.75
VMA1	YDL185W	AAD3	P25612	363 aa		4.14	□□□□□ -1.75
VMA1	YDL185W	SUV3	P32580	737 aa		4.14	□□□□□ -1.75
VMA1	YDL185W	PEP12	P32854	288 aa		4.14	□□□□□ -1.75
VMA1	YDL185W	NTR2	P36118	322 aa	Predicted RBP	4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms