RNA–Protein interactions for RNA: YDL136W

RPL35B, Transcript of Ribosomal 60S subunit protein L35B, yeast

Gene RPL35B, Length 363 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPL35B	YDL136W	PEF1	P53238	335 aa		4.59	□□□□□ -1.67
RPL35B	YDL136W	YNR071C	P53757	342 aa		4.59	□□□□□ -1.67
RPL35B	YDL136W	ECM16	Q04217	1267 aa	Known RBP	4.59	□□□□□ -1.67
RPL35B	YDL136W	YLR040C	Q07988	224 aa		4.59	□□□□□ -1.67
RPL35B	YDL136W	MCH5	Q08777	521 aa		4.59	□□□□□ -1.67
RPL35B	YDL136W	FRE5	Q08908	694 aa		4.59	□□□□□ -1.67
RPL35B	YDL136W	NTO1	Q12311	748 aa		4.59	□□□□□ -1.67
RPL35B	YDL136W	ARP7	Q12406	477 aa		4.59	□□□□□ -1.67
RPL35B	YDL136W	VPS5	Q92331	675 aa		4.59	□□□□□ -1.67
RPL35B	YDL136W	CBP3	P21560	335 aa		4.58	□□□□□ -1.68
RPL35B	YDL136W	SEC15	P22224	910 aa		4.58	□□□□□ -1.68
RPL35B	YDL136W	DBF20	P32328	564 aa		4.58	□□□□□ -1.68
RPL35B	YDL136W	HIS7	P33734	552 aa	Known RBP	4.58	□□□□□ -1.68
RPL35B	YDL136W	SDS22	P36047	338 aa		4.58	□□□□□ -1.68
RPL35B	YDL136W	SFB3	P38810	929 aa		4.58	□□□□□ -1.68
RPL35B	YDL136W	SWD1	P39706	426 aa		4.58	□□□□□ -1.68
RPL35B	YDL136W	UBP5	P39944	805 aa		4.58	□□□□□ -1.68
RPL35B	YDL136W	ACA1	P39970	489 aa		4.58	□□□□□ -1.68
RPL35B	YDL136W	RPT2	P40327	437 aa	Known RBP	4.58	□□□□□ -1.68
RPL35B	YDL136W	MAD3	P47074	515 aa		4.58	□□□□□ -1.68
RPL35B	YDL136W	PAN2	P53010	1115 aa	Predicted RBP	4.58	□□□□□ -1.68
RPL35B	YDL136W	SQS1	P53866	767 aa	Known RBP	4.58	□□□□□ -1.68
RPL35B	YDL136W	TIM50	Q02776	476 aa		4.58	□□□□□ -1.68
RPL35B	YDL136W	ADY4	Q05955	493 aa		4.58	□□□□□ -1.68
RPL35B	YDL136W	YFT2	Q06676	274 aa		4.58	□□□□□ -1.68
RPL35B	YDL136W	BUD21	Q08492	214 aa	Predicted RBP	4.58	□□□□□ -1.68
RPL35B	YDL136W	DBP10	Q12389	995 aa	Known RBP	4.58	□□□□□ -1.68
RPL35B	YDL136W	URA3	P03962	267 aa		4.57	□□□□□ -1.68
RPL35B	YDL136W	VAS1	P07806	1104 aa	Known RBP	4.57	□□□□□ -1.68
RPL35B	YDL136W	PET309	P32522	965 aa	Predicted RBP	4.57	□□□□□ -1.68
RPL35B	YDL136W	SWE1	P32944	819 aa		4.57	□□□□□ -1.68
RPL35B	YDL136W	DEF1	P35732	738 aa	Known RBP	4.57	□□□□□ -1.68
RPL35B	YDL136W	EHT1	P38295	451 aa		4.57	□□□□□ -1.68
RPL35B	YDL136W	YCG1	Q06680	1035 aa		4.57	□□□□□ -1.68
RPL35B	YDL136W	AIM39	Q08223	395 aa		4.57	□□□□□ -1.68
RPL35B	YDL136W	ALG7	P07286	448 aa		4.56	□□□□□ -1.68
RPL35B	YDL136W	ARG1	P22768	420 aa		4.56	□□□□□ -1.68
RPL35B	YDL136W	CWH43	P25618	953 aa		4.56	□□□□□ -1.68
RPL35B	YDL136W	SPC72	P39723	622 aa		4.56	□□□□□ -1.68
RPL35B	YDL136W	SSP120	P39931	234 aa	Known RBP	4.56	□□□□□ -1.68
RPL35B	YDL136W	TMN3	P40071	706 aa		4.56	□□□□□ -1.68
RPL35B	YDL136W	PIG2	P40187	538 aa		4.56	□□□□□ -1.68
RPL35B	YDL136W	ERR3	P42222	437 aa		4.56	□□□□□ -1.68
RPL35B	YDL136W	TAF1	P46677	1066 aa		4.56	□□□□□ -1.68
RPL35B	YDL136W	TAH11	P47112	604 aa		4.56	□□□□□ -1.68
RPL35B	YDL136W	PAP2	P53632	584 aa	Known RBP	4.56	□□□□□ -1.68
RPL35B	YDL136W	CEF1	Q03654	590 aa	Predicted RBP	4.56	□□□□□ -1.68
RPL35B	YDL136W	CIA1	Q05583	330 aa		4.56	□□□□□ -1.68
RPL35B	YDL136W	MLH3	Q12083	715 aa		4.56	□□□□□ -1.68
RPL35B	YDL136W	CHS5	Q12114	671 aa	Known RBP	4.56	□□□□□ -1.68
RPL35B	YDL136W	ZRT2	Q12436	422 aa		4.56	□□□□□ -1.68
RPL35B	YDL136W	SIR3	P06701	978 aa		4.55	□□□□□ -1.68
RPL35B	YDL136W	PHO81	P17442	1178 aa		4.55	□□□□□ -1.68
RPL35B	YDL136W	YCR015C	P25616	317 aa		4.55	□□□□□ -1.68
RPL35B	YDL136W	MSH1	P25846	959 aa		4.55	□□□□□ -1.68
RPL35B	YDL136W	MSS1	P32559	526 aa	Predicted RBP	4.55	□□□□□ -1.68
RPL35B	YDL136W	MRS6	P32864	603 aa	Known RBP	4.55	□□□□□ -1.68
RPL35B	YDL136W	PHO11	P35842	467 aa		4.55	□□□□□ -1.68
RPL35B	YDL136W	APM3	P38153	483 aa		4.55	□□□□□ -1.68
RPL35B	YDL136W	EXO84	P38261	753 aa		4.55	□□□□□ -1.68
RPL35B	YDL136W	SUL1	P38359	859 aa		4.55	□□□□□ -1.68
RPL35B	YDL136W	PHO12	P38693	467 aa		4.55	□□□□□ -1.68
RPL35B	YDL136W	MPS3	P47069	682 aa		4.55	□□□□□ -1.68
RPL35B	YDL136W	RNT1	Q02555	471 aa		4.55	□□□□□ -1.68
RPL35B	YDL136W	FDC1	Q03034	503 aa		4.55	□□□□□ -1.68
RPL35B	YDL136W	HOS1	Q12214	470 aa		4.55	□□□□□ -1.68
RPL35B	YDL136W	YKL033W-A	Q86ZR7	236 aa		4.55	□□□□□ -1.68
RPL35B	YDL136W	PTH2	P34222	208 aa		4.54	□□□□□ -1.68
RPL35B	YDL136W	PPS1	P38148	807 aa		4.54	□□□□□ -1.68
RPL35B	YDL136W	REV7	P38927	245 aa		4.54	□□□□□ -1.68
RPL35B	YDL136W	FMP52	P40008	231 aa		4.54	□□□□□ -1.68
RPL35B	YDL136W	MDR1	P53258	950 aa		4.54	□□□□□ -1.68
RPL35B	YDL136W	FHN1	P53279	174 aa		4.54	□□□□□ -1.68
RPL35B	YDL136W	ACS1	Q01574	713 aa		4.54	□□□□□ -1.68
RPL35B	YDL136W	KIN4	Q01919	800 aa		4.54	□□□□□ -1.68
RPL35B	YDL136W	ESC8	Q08119	714 aa		4.54	□□□□□ -1.68
RPL35B	YDL136W	AIM41	Q12032	185 aa		4.54	□□□□□ -1.68
RPL35B	YDL136W	PPR1	P07272	904 aa	Predicted RBP	4.53	□□□□□ -1.68
RPL35B	YDL136W	PRP28	P23394	588 aa		4.53	□□□□□ -1.68
RPL35B	YDL136W	STT3	P39007	718 aa	Known RBP	4.53	□□□□□ -1.68
RPL35B	YDL136W	SAP185	P40856	1058 aa		4.53	□□□□□ -1.68
RPL35B	YDL136W	SVL3	Q03088	825 aa	Known RBP	4.53	□□□□□ -1.68
RPL35B	YDL136W	YOL073C	Q08232	322 aa		4.53	□□□□□ -1.68
RPL35B	YDL136W	THR1	P17423	357 aa	Known RBP	4.52	□□□□□ -1.69
RPL35B	YDL136W	MSM1	P22438	575 aa		4.52	□□□□□ -1.69
RPL35B	YDL136W	TAF5	P38129	798 aa		4.52	□□□□□ -1.69
RPL35B	YDL136W	KHA1	P40309	873 aa		4.52	□□□□□ -1.69
RPL35B	YDL136W	VPS27	P40343	622 aa	Known RBP	4.52	□□□□□ -1.69
RPL35B	YDL136W	TEL2	P53038	688 aa		4.52	□□□□□ -1.69
RPL35B	YDL136W	YGR054W	P53235	642 aa	Known RBP	4.52	□□□□□ -1.69
RPL35B	YDL136W	TRI1	Q05024	226 aa		4.52	□□□□□ -1.69
RPL35B	YDL136W	PCK1	P10963	549 aa		4.51	□□□□□ -1.69
RPL35B	YDL136W	PMI40	P29952	429 aa	Known RBP	4.51	□□□□□ -1.69
RPL35B	YDL136W	SET3	P36124	751 aa		4.51	□□□□□ -1.69
RPL35B	YDL136W	STB5	P38699	743 aa		4.51	□□□□□ -1.69
RPL35B	YDL136W	YLF2	P38746	405 aa		4.51	□□□□□ -1.69
RPL35B	YDL136W	YHR097C	P38809	366 aa	Known RBP	4.51	□□□□□ -1.69
RPL35B	YDL136W	GSM1	P42950	618 aa		4.51	□□□□□ -1.69
RPL35B	YDL136W	SUB1	P54000	292 aa	Known RBP	4.51	□□□□□ -1.69
RPL35B	YDL136W	EIS1	Q05050	843 aa	Known RBP	4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 118.4 ms