RNA–Protein interactions for RNA: YCR097W

HMRA1, Transcript of Silenced copy of a1 at HMR, yeast

Gene HMRA1, Length 381 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMRA1	YCR097W	NUG1	P40010	520 aa	Known RBP	4.3	□□□□□ -1.72
HMRA1	YCR097W	YJL043W	P47053	257 aa		4.3	□□□□□ -1.72
HMRA1	YCR097W	YIP4	P53093	235 aa		4.3	□□□□□ -1.72
HMRA1	YCR097W	COQ6	P53318	479 aa		4.3	□□□□□ -1.72
HMRA1	YCR097W	YNL018C	P53976	612 aa		4.3	□□□□□ -1.72
HMRA1	YCR097W	NUP53	Q03790	475 aa		4.3	□□□□□ -1.72
HMRA1	YCR097W	YMR084W	A2P2R3	262 aa		4.29	□□□□□ -1.72
HMRA1	YCR097W	NSE3	Q05541	303 aa		4.29	□□□□□ -1.72
HMRA1	YCR097W	CRC1	Q12289	327 aa		4.29	□□□□□ -1.72
HMRA1	YCR097W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.28	□□□□□ -1.72	not detected
HMRA1	YCR097W	MEF1	P25039	761 aa		4.28	□□□□□ -1.72
HMRA1	YCR097W	CNE1	P27825	502 aa		4.28	□□□□□ -1.72
HMRA1	YCR097W	EXO1	P39875	702 aa		4.28	□□□□□ -1.72
HMRA1	YCR097W	AIM14	P53109	570 aa		4.28	□□□□□ -1.72
HMRA1	YCR097W	ATG33	Q06485	197 aa		4.28	□□□□□ -1.72
HMRA1	YCR097W	YDL073W	Q07454	984 aa		4.28	□□□□□ -1.72
HMRA1	YCR097W	YPR089W	O13585	888 aa		4.27	□□□□□ -1.73
HMRA1	YCR097W	WHI2	P12611	486 aa		4.27	□□□□□ -1.73
HMRA1	YCR097W	PRP22	P24384	1145 aa	Known RBP	4.27	□□□□□ -1.73
HMRA1	YCR097W	IMG2	P25642	146 aa	Predicted RBP	4.27	□□□□□ -1.73
HMRA1	YCR097W	PPE1	P38796	400 aa		4.27	□□□□□ -1.73
HMRA1	YCR097W	BEM4	P39011	633 aa		4.27	□□□□□ -1.73
HMRA1	YCR097W	TMN3	P40071	706 aa		4.27	□□□□□ -1.73
HMRA1	YCR097W	MFM1	Q02783	413 aa		4.27	□□□□□ -1.73
HMRA1	YCR097W	RCR2	Q03446	210 aa	Known RBP	4.27	□□□□□ -1.73
HMRA1	YCR097W	COG8	Q04632	607 aa		4.27	□□□□□ -1.73
HMRA1	YCR097W	BSP1	Q06604	576 aa		4.27	□□□□□ -1.73
HMRA1	YCR097W	HMG1	P12683	1054 aa		4.26	□□□□□ -1.73
HMRA1	YCR097W	YAP1	P19880	650 aa	Known RBP	4.26	□□□□□ -1.73
HMRA1	YCR097W	EFR3	Q03653	782 aa	Known RBP	4.25	□□□□□ -1.73
HMRA1	YCR097W	GIN4	Q12263	1142 aa		4.25	□□□□□ -1.73
HMRA1	YCR097W	HER1	Q12276	1246 aa		4.25	□□□□□ -1.73
HMRA1	YCR097W	GSY2	P27472	705 aa		4.24	□□□□□ -1.73
HMRA1	YCR097W	MRPL7	P36519	292 aa		4.24	□□□□□ -1.73
HMRA1	YCR097W	OPT1	P40897	799 aa		4.24	□□□□□ -1.73
HMRA1	YCR097W	CEF1	Q03654	590 aa	Predicted RBP	4.24	□□□□□ -1.73
HMRA1	YCR097W	RDL1	Q12305	139 aa	Known RBP	4.24	□□□□□ -1.73
HMRA1	YCR097W	YLR111W	Q12528	110 aa		4.24	□□□□□ -1.73
HMRA1	YCR097W	SEC3	P33332	1336 aa	Known RBP	4.23	□□□□□ -1.73
HMRA1	YCR097W	PCL2	P25693	308 aa		4.23	□□□□□ -1.73
HMRA1	YCR097W	MGM1	P32266	881 aa		4.23	□□□□□ -1.73
HMRA1	YCR097W	YKU70	P32807	602 aa		4.23	□□□□□ -1.73
HMRA1	YCR097W	YKR075C	P36155	307 aa		4.23	□□□□□ -1.73
HMRA1	YCR097W	YAT2	P40017	923 aa		4.23	□□□□□ -1.73
HMRA1	YCR097W	YFL015C	P43578	164 aa		4.23	□□□□□ -1.73
HMRA1	YCR097W	BUD17	P53727	317 aa		4.23	□□□□□ -1.73
HMRA1	YCR097W	YMR210W	Q03649	449 aa		4.23	□□□□□ -1.73
HMRA1	YCR097W	YPL216W	Q08964	1102 aa		4.23	□□□□□ -1.73
HMRA1	YCR097W	YOR111W	Q99210	232 aa		4.23	□□□□□ -1.73
HMRA1	YCR097W	IME1	P21190	360 aa		4.22	□□□□□ -1.73
HMRA1	YCR097W	MAL31	P38156	614 aa		4.22	□□□□□ -1.73
HMRA1	YCR097W	PCM1	P38628	557 aa	Known RBP	4.22	□□□□□ -1.73
HMRA1	YCR097W	BUD8	P41698	603 aa		4.22	□□□□□ -1.73
HMRA1	YCR097W	PXA1	P41909	870 aa		4.22	□□□□□ -1.73
HMRA1	YCR097W	FDC1	Q03034	503 aa		4.22	□□□□□ -1.73
HMRA1	YCR097W	MRPL1	Q04599	285 aa		4.22	□□□□□ -1.73
HMRA1	YCR097W	YOR131C	Q12486	218 aa		4.22	□□□□□ -1.73
HMRA1	YCR097W	YMR085W	P0CF18	432 aa		4.21	□□□□□ -1.74
HMRA1	YCR097W	YGR054W	P53235	642 aa	Known RBP	4.21	□□□□□ -1.74
HMRA1	YCR097W	ENT2	Q05785	613 aa		4.21	□□□□□ -1.74
HMRA1	YCR097W	YLR407W	Q06070	228 aa		4.21	□□□□□ -1.74
HMRA1	YCR097W	YER190C-B	P0CX94	160 aa		4.2	□□□□□ -1.74
HMRA1	YCR097W	YEL077W-A	P0CX95	160 aa		4.2	□□□□□ -1.74
HMRA1	YCR097W	YGR296C-B	P0CX96	160 aa		4.2	□□□□□ -1.74
HMRA1	YCR097W	YPL283W-B	P0CX97	160 aa		4.2	□□□□□ -1.74
HMRA1	YCR097W	YPR204C-A	P0CX98	160 aa		4.2	□□□□□ -1.74
HMRA1	YCR097W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
HMRA1	YCR097W	SRP40	P32583	406 aa	Predicted RBP	4.2	□□□□□ -1.74
HMRA1	YCR097W	OAF1	P39720	1047 aa	Predicted RBP	4.2	□□□□□ -1.74
HMRA1	YCR097W	SPO1	P53541	631 aa		4.2	□□□□□ -1.74
HMRA1	YCR097W	GFD1	Q04839	188 aa	Known RBP	4.2	□□□□□ -1.74
HMRA1	YCR097W	BUD7	Q08754	746 aa		4.2	□□□□□ -1.74
HMRA1	YCR097W	TIM23	P32897	222 aa		4.19	□□□□□ -1.74
HMRA1	YCR097W	YMR124W	P39523	943 aa	Known RBP	4.19	□□□□□ -1.74
HMRA1	YCR097W	YIL024C	P40543	189 aa		4.19	□□□□□ -1.74
HMRA1	YCR097W	YPS7	Q06325	596 aa		4.19	□□□□□ -1.74
HMRA1	YCR097W	SRL1	Q08673	210 aa		4.19	□□□□□ -1.74
HMRA1	YCR097W	SFL1	P20134	766 aa		4.18	□□□□□ -1.74
HMRA1	YCR097W	RPS15	Q01855	142 aa	Known RBP	4.18	□□□□□ -1.74
HMRA1	YCR097W	TIM50	Q02776	476 aa		4.18	□□□□□ -1.74
HMRA1	YCR097W	SPN1	Q06505	410 aa	Predicted RBP	4.18	□□□□□ -1.74
HMRA1	YCR097W	NDD1	Q08887	554 aa		4.18	□□□□□ -1.74
HMRA1	YCR097W	TGS1	Q12052	315 aa		4.18	□□□□□ -1.74
HMRA1	YCR097W	RNR3	P21672	869 aa	Known RBP	4.17	□□□□□ -1.74
HMRA1	YCR097W	PEX6	P33760	1030 aa		4.17	□□□□□ -1.74
HMRA1	YCR097W	FLO5	P38894	1075 aa		4.17	□□□□□ -1.74
HMRA1	YCR097W	CFD1	P40558	293 aa		4.17	□□□□□ -1.74
HMRA1	YCR097W	PPN1	Q04119	674 aa		4.17	□□□□□ -1.74
HMRA1	YCR097W	LOT5	P34234	306 aa		4.16	□□□□□ -1.74
HMRA1	YCR097W	CRG1	P38892	291 aa	RIP-Chip data	4.16	□□□□□ -1.74	not detected
HMRA1	YCR097W	TDA10	P42938	290 aa		4.16	□□□□□ -1.74
HMRA1	YCR097W	SAE2	P46946	345 aa		4.16	□□□□□ -1.74
HMRA1	YCR097W	SAP4	P53036	818 aa		4.16	□□□□□ -1.74
HMRA1	YCR097W	UGO1	Q03327	502 aa		4.16	□□□□□ -1.74
HMRA1	YCR097W	TPO3	Q06451	622 aa		4.16	□□□□□ -1.74
HMRA1	YCR097W	MSH2	P25847	964 aa		4.15	□□□□□ -1.75
HMRA1	YCR097W	PRE4	P30657	266 aa		4.15	□□□□□ -1.75
HMRA1	YCR097W	DHR2	P36009	735 aa	Predicted RBP	4.15	□□□□□ -1.75
HMRA1	YCR097W	BRN1	P38170	754 aa		4.15	□□□□□ -1.75
HMRA1	YCR097W	FTR1	P40088	404 aa		4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 92.9 ms