RNA–Protein interactions for RNA: YCR077C

PAT1, Transcript of Deadenylation-dependent mRNA-decapping factor, yeastyeast

Gene PAT1, Length 2,391 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAT1YCR077C DSE4P53753 1117 aa6.21□□□□□ -1.42
PAT1YCR077C SQS1P53866 767 aaKnown RBP6.21□□□□□ -1.42
PAT1YCR077C IPI3P53877 555 aa6.21□□□□□ -1.42
PAT1YCR077C CBK1P53894 756 aa6.21□□□□□ -1.42
PAT1YCR077C UBP2Q01476 1272 aa6.21□□□□□ -1.42
PAT1YCR077C CIK1Q01649 594 aa6.21□□□□□ -1.42
PAT1YCR077C DON1Q05610 365 aa6.21□□□□□ -1.42
PAT1YCR077C YDR278CQ05612 105 aa6.21□□□□□ -1.42
PAT1YCR077C CDC53Q12018 815 aaKnown RBP6.21□□□□□ -1.42
PAT1YCR077C SPS1P08458 490 aa6.21□□□□□ -1.42
PAT1YCR077C HEM15P16622 393 aa6.21□□□□□ -1.42
PAT1YCR077C RAM2P29703 316 aa6.21□□□□□ -1.42
PAT1YCR077C PTK1P36002 662 aaPredicted RBP6.21□□□□□ -1.42
PAT1YCR077C RSM22P36056 628 aa6.21□□□□□ -1.42
PAT1YCR077C UIP5P36137 443 aa6.21□□□□□ -1.42
PAT1YCR077C GEM1P39722 662 aa6.21□□□□□ -1.42
PAT1YCR077C LGE1Q02796 332 aaKnown RBP6.21□□□□□ -1.42
PAT1YCR077C RGA2Q06407 1009 aa6.21□□□□□ -1.42
PAT1YCR077C SYO1Q07395 620 aa6.21□□□□□ -1.42
PAT1YCR077C DPH6Q12429 685 aa6.21□□□□□ -1.42
PAT1YCR077C RTP1Q12751 981 aa6.21□□□□□ -1.42
PAT1YCR077C YPT6Q99260 215 aa6.21□□□□□ -1.42
PAT1YCR077C CBF1P17106 351 aa6.2□□□□□ -1.42
PAT1YCR077C YJU2P28320 278 aaPredicted RBP6.2□□□□□ -1.42
PAT1YCR077C ITR1P30605 584 aa6.2□□□□□ -1.42
PAT1YCR077C AFG2P32794 780 aa6.2□□□□□ -1.42
PAT1YCR077C AST1P35183 429 aa6.2□□□□□ -1.42
PAT1YCR077C YKL050CP35736 922 aa6.2□□□□□ -1.42
PAT1YCR077C DBP7P36120 742 aaKnown RBP6.2□□□□□ -1.42
PAT1YCR077C PGM2P37012 569 aaKnown RBP6.2□□□□□ -1.42
PAT1YCR077C MAK5P38112 773 aaPredicted RBP6.2□□□□□ -1.42
PAT1YCR077C PBP2P38151 413 aaKnown RBP RIP-Chip data6.2□□□□□ -1.42not detected
PAT1YCR077C SWC5P38326 303 aa6.2□□□□□ -1.42
PAT1YCR077C YHL012WP38709 493 aa6.2□□□□□ -1.42
PAT1YCR077C YHI9P38765 294 aa6.2□□□□□ -1.42
PAT1YCR077C END3P39013 349 aa6.2□□□□□ -1.42
PAT1YCR077C ICP55P40051 511 aa6.2□□□□□ -1.42
PAT1YCR077C FMP10P40098 244 aa6.2□□□□□ -1.42
PAT1YCR077C TAF6P53040 516 aa6.2□□□□□ -1.42
PAT1YCR077C YNL108CP53929 270 aa6.2□□□□□ -1.42
PAT1YCR077C IRC4Q03036 179 aa6.2□□□□□ -1.42
PAT1YCR077C TRM11Q12463 433 aa6.2□□□□□ -1.42
PAT1YCR077C FLO1P32768 1537 aa6.2□□□□□ -1.42
PAT1YCR077C TRK2P28584 889 aa6.2□□□□□ -1.42
PAT1YCR077C SMI1P32566 505 aa6.2□□□□□ -1.42
PAT1YCR077C GDA1P32621 518 aa6.2□□□□□ -1.42
PAT1YCR077C PPS1P38148 807 aa6.2□□□□□ -1.42
PAT1YCR077C EDC3P39998 551 aaKnown RBP6.2□□□□□ -1.42
PAT1YCR077C FCY21P40039 528 aa6.2□□□□□ -1.42
PAT1YCR077C MNT3P40549 630 aa6.2□□□□□ -1.42
PAT1YCR077C ZIP2P53061 704 aa6.2□□□□□ -1.42
PAT1YCR077C OSH6Q02201 448 aa6.2□□□□□ -1.42
PAT1YCR077C SVF1Q05515 481 aa6.2□□□□□ -1.42
PAT1YCR077C RSC3Q06639 885 aa6.2□□□□□ -1.42
PAT1YCR077C IRC3Q06683 689 aa6.2□□□□□ -1.42
PAT1YCR077C FAP7Q12055 197 aaPredicted RBP6.2□□□□□ -1.42
PAT1YCR077C RTC5Q12108 567 aaKnown RBP6.2□□□□□ -1.42
PAT1YCR077C ENO1P00924 437 aaKnown RBP6.19□□□□□ -1.42
PAT1YCR077C RPL24AP04449 155 aaKnown RBP6.19□□□□□ -1.42
PAT1YCR077C GPI10P30777 616 aa6.19□□□□□ -1.42
PAT1YCR077C RTG2P32608 588 aaKnown RBP6.19□□□□□ -1.42
PAT1YCR077C MDL2P33311 773 aa6.19□□□□□ -1.42
PAT1YCR077C UTP11P34247 250 aaPredicted RBP6.19□□□□□ -1.42
PAT1YCR077C YRO2P38079 344 aa6.19□□□□□ -1.42
PAT1YCR077C RRT2P38332 387 aa6.19□□□□□ -1.42
PAT1YCR077C NBP1P52919 319 aaPredicted RBP6.19□□□□□ -1.42
PAT1YCR077C RPM2Q02773 1202 aa6.19□□□□□ -1.42
PAT1YCR077C HMO1Q03973 246 aaKnown RBP6.19□□□□□ -1.42
PAT1YCR077C TAF11Q04226 346 aa6.19□□□□□ -1.42
PAT1YCR077C YLR297WQ05899 129 aa6.19□□□□□ -1.42
PAT1YCR077C YDL124WQ07551 312 aaKnown RBP6.19□□□□□ -1.42
PAT1YCR077C GET4Q12125 312 aa6.19□□□□□ -1.42
PAT1YCR077C MSH5Q12175 901 aa6.19□□□□□ -1.42
PAT1YCR077C SPO16P17122 198 aa6.18□□□□□ -1.42
PAT1YCR077C VHC1P38329 1120 aa6.18□□□□□ -1.42
PAT1YCR077C PIK1P39104 1066 aa6.18□□□□□ -1.42
PAT1YCR077C ROG3P43602 733 aa6.18□□□□□ -1.42
PAT1YCR077C CNN1P43618 361 aa6.18□□□□□ -1.42
PAT1YCR077C FMP33P46998 180 aa6.18□□□□□ -1.42
PAT1YCR077C BSC5P53755 489 aa6.18□□□□□ -1.42
PAT1YCR077C SVL3Q03088 825 aaKnown RBP6.18□□□□□ -1.42
PAT1YCR077C FMN1Q03778 218 aa6.18□□□□□ -1.42
PAT1YCR077C DYN3Q04949 312 aa6.18□□□□□ -1.42
PAT1YCR077C ATG38Q05789 226 aaKnown RBP6.18□□□□□ -1.42
PAT1YCR077C YDL057WQ07379 328 aa6.18□□□□□ -1.42
PAT1YCR077C GCR1P07261 785 aa6.18□□□□□ -1.42
PAT1YCR077C PBS2P08018 668 aa6.18□□□□□ -1.42
PAT1YCR077C YAK1P14680 807 aa6.18□□□□□ -1.42
PAT1YCR077C URA4P20051 364 aa6.18□□□□□ -1.42
PAT1YCR077C MSB1P21339 1137 aaKnown RBP6.18□□□□□ -1.42
PAT1YCR077C YCR016WP25617 290 aaKnown RBP6.18□□□□□ -1.42
PAT1YCR077C RPL8BP29453 256 aaKnown RBP6.18□□□□□ -1.42
PAT1YCR077C HXT3P32466 567 aaKnown RBP6.18□□□□□ -1.42
PAT1YCR077C SAS3P34218 831 aa6.18□□□□□ -1.42
PAT1YCR077C TOM20P35180 183 aa6.18□□□□□ -1.42
PAT1YCR077C BDF1P35817 686 aa6.18□□□□□ -1.42
PAT1YCR077C MSG5P38590 489 aa6.18□□□□□ -1.42
PAT1YCR077C PEX18P38855 283 aa6.18□□□□□ -1.42
PAT1YCR077C ZRG8P40021 1076 aa6.18□□□□□ -1.42
PAT1YCR077C FIG4P42837 879 aa6.18□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 2342.8 ms