RNA–Protein interactions for RNA: YCR020W-B

HTL1, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene HTL1, Length 237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTL1YCR020W-B IRC3Q06683 689 aa2.49□□□□□ -2.01
HTL1YCR020W-B HEM1P09950 548 aaPredicted RBP2.48□□□□□ -2.01
HTL1YCR020W-B YKU70P32807 602 aa2.48□□□□□ -2.01
HTL1YCR020W-B RGT1P32862 1170 aa2.48□□□□□ -2.01
HTL1YCR020W-B BUD6P41697 788 aa2.48□□□□□ -2.01
HTL1YCR020W-B PXA1P41909 870 aa2.48□□□□□ -2.01
HTL1YCR020W-B YJL043WP47053 257 aa2.48□□□□□ -2.01
HTL1YCR020W-B YIP4P53093 235 aa2.48□□□□□ -2.01
HTL1YCR020W-B GUD1Q07729 489 aa2.48□□□□□ -2.01
HTL1YCR020W-B PRS5Q12265 496 aaKnown RBP2.48□□□□□ -2.01
HTL1YCR020W-B AQY1P0CD91 305 aa2.47□□□□□ -2.01
HTL1YCR020W-B BEM4P39011 633 aa2.47□□□□□ -2.01
HTL1YCR020W-B ERG13P54839 491 aaKnown RBP2.47□□□□□ -2.01
HTL1YCR020W-B YPL068CQ02749 293 aa2.47□□□□□ -2.01
HTL1YCR020W-B YPS7Q06325 596 aa2.47□□□□□ -2.01
HTL1YCR020W-B RPL7AP05737 244 aaKnown RBP2.46□□□□□ -2.02
HTL1YCR020W-B TUP1P16649 713 aa2.46□□□□□ -2.02
HTL1YCR020W-B PMA2P19657 947 aa2.46□□□□□ -2.02
HTL1YCR020W-B EUG1P32474 517 aa2.46□□□□□ -2.02
HTL1YCR020W-B BUD8P41698 603 aa2.46□□□□□ -2.02
HTL1YCR020W-B NMD5P46970 1048 aa2.46□□□□□ -2.02
HTL1YCR020W-B MET13P53128 600 aa2.46□□□□□ -2.02
HTL1YCR020W-B TIM50Q02776 476 aa2.46□□□□□ -2.02
HTL1YCR020W-B YPL216WQ08964 1102 aa2.46□□□□□ -2.02
HTL1YCR020W-B RPL7BQ12213 244 aaKnown RBP2.46□□□□□ -2.02
HTL1YCR020W-B SEC3P33332 1336 aaKnown RBP2.45□□□□□ -2.02
HTL1YCR020W-B CPA2P03965 1118 aaKnown RBP2.45□□□□□ -2.02
HTL1YCR020W-B LEU2P04173 364 aaPredicted RBP2.45□□□□□ -2.02
HTL1YCR020W-B URE2P23202 354 aaKnown RBP2.45□□□□□ -2.02
HTL1YCR020W-B ECM32P32644 1121 aaKnown RBP2.45□□□□□ -2.02
HTL1YCR020W-B RPC34P32910 317 aa2.45□□□□□ -2.02
HTL1YCR020W-B SNO3P43544 222 aa2.45□□□□□ -2.02
HTL1YCR020W-B EFR3Q03653 782 aaKnown RBP2.45□□□□□ -2.02
HTL1YCR020W-B YDL073WQ07454 984 aa2.45□□□□□ -2.02
HTL1YCR020W-B NTG2Q08214 380 aa2.45□□□□□ -2.02
HTL1YCR020W-B IME1P21190 360 aa2.44□□□□□ -2.02
HTL1YCR020W-B CNE1P27825 502 aa2.44□□□□□ -2.02
HTL1YCR020W-B MRPL7P36519 292 aa2.44□□□□□ -2.02
HTL1YCR020W-B TDA3P38758 523 aa2.44□□□□□ -2.02
HTL1YCR020W-B DUN1P39009 513 aa2.44□□□□□ -2.02
HTL1YCR020W-B EXO1P39875 702 aa2.44□□□□□ -2.02
HTL1YCR020W-B IRC8P47046 822 aa2.44□□□□□ -2.02
HTL1YCR020W-B YGR054WP53235 642 aaKnown RBP2.44□□□□□ -2.02
HTL1YCR020W-B COQ6P53318 479 aa2.44□□□□□ -2.02
HTL1YCR020W-B SCW4P53334 386 aaKnown RBP2.44□□□□□ -2.02
HTL1YCR020W-B BUD17P53727 317 aa2.44□□□□□ -2.02
HTL1YCR020W-B YNL018CP53976 612 aa2.44□□□□□ -2.02
HTL1YCR020W-B CEF1Q03654 590 aaPredicted RBP2.44□□□□□ -2.02
HTL1YCR020W-B WHI2P12611 486 aa2.43□□□□□ -2.02
HTL1YCR020W-B APD1P38281 316 aa2.43□□□□□ -2.02
HTL1YCR020W-B CRG1P38892 291 aaRIP-Chip data2.43□□□□□ -2.02not detected
HTL1YCR020W-B JHD1P40034 492 aa2.43□□□□□ -2.02
HTL1YCR020W-B SPO1P53541 631 aa2.43□□□□□ -2.02
HTL1YCR020W-B FDC1Q03034 503 aa2.43□□□□□ -2.02
HTL1YCR020W-B RSC9Q03124 581 aa2.43□□□□□ -2.02
HTL1YCR020W-B PPN1Q04119 674 aa2.43□□□□□ -2.02
HTL1YCR020W-B POB3Q04636 552 aaKnown RBP2.43□□□□□ -2.02
HTL1YCR020W-B STP4Q07351 490 aa2.43□□□□□ -2.02
HTL1YCR020W-B RPS17AP02407 136 aaKnown RBP2.42□□□□□ -2.02
HTL1YCR020W-B RPS17BP14127 136 aaKnown RBP2.42□□□□□ -2.02
HTL1YCR020W-B TSR4P25040 408 aa2.42□□□□□ -2.02
HTL1YCR020W-B PRE4P30657 266 aa2.42□□□□□ -2.02
HTL1YCR020W-B YEL025CP39991 1188 aa2.42□□□□□ -2.02
HTL1YCR020W-B FTR1P40088 404 aa2.42□□□□□ -2.02
HTL1YCR020W-B MNT3P40549 630 aa2.42□□□□□ -2.02
HTL1YCR020W-B YNL193WP53870 558 aa2.42□□□□□ -2.02
HTL1YCR020W-B TFB2Q02939 513 aa2.42□□□□□ -2.02
HTL1YCR020W-B YAP1P19880 650 aaKnown RBP2.41□□□□□ -2.02
HTL1YCR020W-B RNR3P21672 869 aaKnown RBP2.41□□□□□ -2.02
HTL1YCR020W-B SSD1P24276 1250 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
HTL1YCR020W-B OPT1P40897 799 aa2.41□□□□□ -2.02
HTL1YCR020W-B YFL015CP43578 164 aa2.41□□□□□ -2.02
HTL1YCR020W-B TAF4P50105 388 aa2.41□□□□□ -2.02
HTL1YCR020W-B SDA1P53313 767 aaKnown RBP2.41□□□□□ -2.02
HTL1YCR020W-B NOP15P53927 220 aaPredicted RBP2.41□□□□□ -2.02
HTL1YCR020W-B GFD1Q04839 188 aaKnown RBP2.41□□□□□ -2.02
HTL1YCR020W-B YLR001CQ07895 862 aa2.41□□□□□ -2.02
HTL1YCR020W-B TGS1Q12052 315 aa2.41□□□□□ -2.02
HTL1YCR020W-B YMR084WA2P2R3 262 aa2.4□□□□□ -2.03
HTL1YCR020W-B SWI6P09959 803 aa2.4□□□□□ -2.03
HTL1YCR020W-B DHR2P36009 735 aaPredicted RBP2.4□□□□□ -2.03
HTL1YCR020W-B CDS1P38221 457 aa2.4□□□□□ -2.03
HTL1YCR020W-B EHT1P38295 451 aa2.4□□□□□ -2.03
HTL1YCR020W-B YHR033WP38690 423 aa2.4□□□□□ -2.03
HTL1YCR020W-B OCA5P38738 679 aa2.4□□□□□ -2.03
HTL1YCR020W-B PCI8P40512 444 aa2.4□□□□□ -2.03
HTL1YCR020W-B BST1P43571 1029 aa2.4□□□□□ -2.03
HTL1YCR020W-B RET2P43621 546 aa2.4□□□□□ -2.03
HTL1YCR020W-B IDP3P53982 420 aaKnown RBP2.4□□□□□ -2.03
HTL1YCR020W-B ORC1P54784 914 aaPredicted RBP2.4□□□□□ -2.03
HTL1YCR020W-B WAR1Q03631 944 aa2.4□□□□□ -2.03
HTL1YCR020W-B ENT2Q05785 613 aa2.4□□□□□ -2.03
HTL1YCR020W-B HER1Q12276 1246 aa2.4□□□□□ -2.03
HTL1YCR020W-B CRC1Q12289 327 aa2.4□□□□□ -2.03
HTL1YCR020W-B YMR085WP0CF18 432 aa2.39□□□□□ -2.03
HTL1YCR020W-B GLN4P13188 809 aaKnown RBP2.39□□□□□ -2.03
HTL1YCR020W-B SEC65P29478 273 aa2.39□□□□□ -2.03
HTL1YCR020W-B LOT5P34234 306 aa2.39□□□□□ -2.03
HTL1YCR020W-B ASK1P35734 292 aa2.39□□□□□ -2.03
HTL1YCR020W-B PXL1P36166 706 aa2.39□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 33.7 ms