RNA–Protein interactions for RNA: YBR135W

CKS1, Transcript of Cyclin-dependent protein kinase regulatory subunit and adaptor, yeastyeast

Gene CKS1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKS1YBR135W HRR25P29295 494 aaKnown RBP5.69□□□□□ -1.5
CKS1YBR135W TGL1P34163 548 aa5.69□□□□□ -1.5
CKS1YBR135W BCD1P38772 366 aa5.69□□□□□ -1.5
CKS1YBR135W SCS2P40075 244 aaKnown RBP5.69□□□□□ -1.5
CKS1YBR135W MAD2P40958 196 aa5.69□□□□□ -1.5
CKS1YBR135W UBC11P52492 156 aa5.69□□□□□ -1.5
CKS1YBR135W PEF1P53238 335 aa5.69□□□□□ -1.5
CKS1YBR135W ADY4Q05955 493 aa5.69□□□□□ -1.5
CKS1YBR135W IRC13Q08630 104 aa5.69□□□□□ -1.5
CKS1YBR135W NTO1Q12311 748 aa5.69□□□□□ -1.5
CKS1YBR135W HMG2P12684 1045 aa5.68□□□□□ -1.5
CKS1YBR135W MVD1P32377 396 aaKnown RBP5.68□□□□□ -1.5
CKS1YBR135W PET309P32522 965 aaPredicted RBP5.68□□□□□ -1.5
CKS1YBR135W BCS1P32839 456 aa5.68□□□□□ -1.5
CKS1YBR135W DEF1P35732 738 aaKnown RBP5.68□□□□□ -1.5
CKS1YBR135W CDS1P38221 457 aa5.68□□□□□ -1.5
CKS1YBR135W YJL163CP46996 555 aa5.68□□□□□ -1.5
CKS1YBR135W YGR021WP53212 290 aa5.68□□□□□ -1.5
CKS1YBR135W FRE5Q08908 694 aa5.68□□□□□ -1.5
CKS1YBR135W DIN7Q12086 430 aa5.68□□□□□ -1.5
CKS1YBR135W UFD4P33202 1483 aa5.68□□□□□ -1.5
CKS1YBR135W YPK9Q12697 1472 aa5.67□□□□□ -1.5
CKS1YBR135W SIR3P06701 978 aa5.67□□□□□ -1.5
CKS1YBR135W SEC15P22224 910 aa5.67□□□□□ -1.5
CKS1YBR135W CWH43P25618 953 aa5.67□□□□□ -1.5
CKS1YBR135W FEN2P25621 512 aaKnown RBP5.67□□□□□ -1.5
CKS1YBR135W SHM2P37291 469 aaKnown RBP5.67□□□□□ -1.5
CKS1YBR135W HRB1P38922 454 aaKnown RBP RIP-Chip data5.67□□□□□ -1.5not detected
CKS1YBR135W UBP5P39944 805 aa5.67□□□□□ -1.5
CKS1YBR135W PIG2P40187 538 aa5.67□□□□□ -1.5
CKS1YBR135W YIL077CP40508 320 aa5.67□□□□□ -1.5
CKS1YBR135W TEP1P53916 434 aa5.67□□□□□ -1.5
CKS1YBR135W YFT2Q06676 274 aa5.67□□□□□ -1.5
CKS1YBR135W AIM39Q08223 395 aa5.67□□□□□ -1.5
CKS1YBR135W VAS1P07806 1104 aaKnown RBP5.66□□□□□ -1.5
CKS1YBR135W ADH4P10127 382 aa5.66□□□□□ -1.5
CKS1YBR135W APA1P16550 321 aaKnown RBP5.66□□□□□ -1.5
CKS1YBR135W TRX2P22803 104 aaKnown RBP5.66□□□□□ -1.5
CKS1YBR135W PRP28P23394 588 aa5.66□□□□□ -1.5
CKS1YBR135W PTH2P34222 208 aa5.66□□□□□ -1.5
CKS1YBR135W RMA1P36001 430 aaKnown RBP5.66□□□□□ -1.5
CKS1YBR135W COS111P38308 924 aa5.66□□□□□ -1.5
CKS1YBR135W CRG1P38892 291 aaRIP-Chip data5.66□□□□□ -1.5not detected
CKS1YBR135W ACA1P39970 489 aa5.66□□□□□ -1.5
CKS1YBR135W FTR1P40088 404 aa5.66□□□□□ -1.5
CKS1YBR135W IMA5P40884 581 aa5.66□□□□□ -1.5
CKS1YBR135W YDL183CP48569 320 aa5.66□□□□□ -1.5
CKS1YBR135W YNR071CP53757 342 aa5.66□□□□□ -1.5
CKS1YBR135W SQS1P53866 767 aaKnown RBP5.66□□□□□ -1.5
CKS1YBR135W RNT1Q02555 471 aa5.66□□□□□ -1.5
CKS1YBR135W FDC1Q03034 503 aa5.66□□□□□ -1.5
CKS1YBR135W YCG1Q06680 1035 aa5.66□□□□□ -1.5
CKS1YBR135W YLR040CQ07988 224 aa5.66□□□□□ -1.5
CKS1YBR135W CLF1Q12309 687 aaPredicted RBP5.66□□□□□ -1.5
CKS1YBR135W DBP10Q12389 995 aaKnown RBP5.66□□□□□ -1.5
CKS1YBR135W ALG7P07286 448 aa5.65□□□□□ -1.5
CKS1YBR135W TUP1P16649 713 aa5.65□□□□□ -1.5
CKS1YBR135W PHO81P17442 1178 aa5.65□□□□□ -1.5
CKS1YBR135W DPB3P27344 201 aa5.65□□□□□ -1.5
CKS1YBR135W TAF5P38129 798 aa5.65□□□□□ -1.5
CKS1YBR135W SWD1P39706 426 aa5.65□□□□□ -1.5
CKS1YBR135W FMP52P40008 231 aa5.65□□□□□ -1.5
CKS1YBR135W RFX1P48743 811 aa5.65□□□□□ -1.5
CKS1YBR135W PAN2P53010 1115 aaPredicted RBP5.65□□□□□ -1.5
CKS1YBR135W MOT3P54785 490 aaKnown RBP5.65□□□□□ -1.5
CKS1YBR135W CHS5Q12114 671 aaKnown RBP5.65□□□□□ -1.5
CKS1YBR135W SCC2Q04002 1493 aa5.64□□□□□ -1.51
CKS1YBR135W PPR1P07272 904 aaPredicted RBP5.64□□□□□ -1.51
CKS1YBR135W CBP3P21560 335 aa5.64□□□□□ -1.51
CKS1YBR135W PMI40P29952 429 aaKnown RBP5.64□□□□□ -1.51
CKS1YBR135W HIS7P33734 552 aaKnown RBP5.64□□□□□ -1.51
CKS1YBR135W YLF2P38746 405 aa5.64□□□□□ -1.51
CKS1YBR135W SFB3P38810 929 aa5.64□□□□□ -1.51
CKS1YBR135W REV7P38927 245 aa5.64□□□□□ -1.51
CKS1YBR135W MAD3P47074 515 aa5.64□□□□□ -1.51
CKS1YBR135W TRI1Q05024 226 aa5.64□□□□□ -1.51
CKS1YBR135W ESC8Q08119 714 aa5.64□□□□□ -1.51
CKS1YBR135W ZRT2Q12436 422 aa5.64□□□□□ -1.51
CKS1YBR135W YKL033W-AQ86ZR7 236 aa5.64□□□□□ -1.51
CKS1YBR135W URA3P03962 267 aa5.63□□□□□ -1.51
CKS1YBR135W ARG1P22768 420 aa5.63□□□□□ -1.51
CKS1YBR135W MSS1P32559 526 aaPredicted RBP5.63□□□□□ -1.51
CKS1YBR135W MRS6P32864 603 aaKnown RBP5.63□□□□□ -1.51
CKS1YBR135W SWE1P32944 819 aa5.63□□□□□ -1.51
CKS1YBR135W IRC24P40580 263 aa5.63□□□□□ -1.51
CKS1YBR135W TAH11P47112 604 aa5.63□□□□□ -1.51
CKS1YBR135W FHN1P53279 174 aa5.63□□□□□ -1.51
CKS1YBR135W HIM1Q06674 414 aa5.63□□□□□ -1.51
CKS1YBR135W AIM41Q12032 185 aa5.63□□□□□ -1.51
CKS1YBR135W TUF1P02992 437 aaKnown RBP5.62□□□□□ -1.51
CKS1YBR135W DBF20P32328 564 aa5.62□□□□□ -1.51
CKS1YBR135W PHO11P35842 467 aa5.62□□□□□ -1.51
CKS1YBR135W YKL222CP35995 705 aa5.62□□□□□ -1.51
CKS1YBR135W PHO12P38693 467 aa5.62□□□□□ -1.51
CKS1YBR135W RPT2P40327 437 aaKnown RBP5.62□□□□□ -1.51
CKS1YBR135W TEL2P53038 688 aa5.62□□□□□ -1.51
CKS1YBR135W SUB1P54000 292 aaKnown RBP5.62□□□□□ -1.51
CKS1YBR135W EIS1Q05050 843 aaKnown RBP5.62□□□□□ -1.51
CKS1YBR135W PSR2Q07949 397 aa5.62□□□□□ -1.51
CKS1YBR135W RPO31P04051 1460 aa5.61□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms