RNA–Protein interactions for RNA: YBL017C

PEP1, Transcript of Type I transmembrane sorting receptor for multiple vacuolar hydrolases, yeastyeast

Gene PEP1, Length 4,740 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP1YBL017C OSW2Q12202 724 aa1.96□□□□□ -2.1
PEP1YBL017C RUD3Q12234 484 aaKnown RBP1.96□□□□□ -2.1
PEP1YBL017C RMP1Q12530 201 aa1.96□□□□□ -2.1
PEP1YBL017C YER152CP10356 443 aa1.96□□□□□ -2.1
PEP1YBL017C CYC8P14922 966 aa1.96□□□□□ -2.1
PEP1YBL017C BET2P20133 325 aa1.96□□□□□ -2.1
PEP1YBL017C YSR3P23501 404 aa1.96□□□□□ -2.1
PEP1YBL017C TSR4P25040 408 aa1.96□□□□□ -2.1
PEP1YBL017C YKL050CP35736 922 aa1.96□□□□□ -2.1
PEP1YBL017C RKM3P38222 552 aa1.96□□□□□ -2.1
PEP1YBL017C YCK3P39962 524 aa1.96□□□□□ -2.1
PEP1YBL017C EFM4P40516 257 aa1.96□□□□□ -2.1
PEP1YBL017C FAF1P40546 346 aaPredicted RBP1.96□□□□□ -2.1
PEP1YBL017C TY4A-JP47023 414 aa1.96□□□□□ -2.1
PEP1YBL017C CCM1P48237 864 aaPredicted RBP1.96□□□□□ -2.1
PEP1YBL017C YGL036WP53185 909 aaPredicted RBP1.96□□□□□ -2.1
PEP1YBL017C TEP1P53916 434 aa1.96□□□□□ -2.1
PEP1YBL017C RCF1Q03713 159 aa1.96□□□□□ -2.1
PEP1YBL017C PSR1Q07800 427 aa1.96□□□□□ -2.1
PEP1YBL017C MNL2Q12205 849 aa1.96□□□□□ -2.1
PEP1YBL017C IMA3P0CW40 589 aa1.95□□□□□ -2.1
PEP1YBL017C IMA4P0CW41 589 aa1.95□□□□□ -2.1
PEP1YBL017C GSY1P23337 708 aa1.95□□□□□ -2.1
PEP1YBL017C PTC3P34221 468 aaKnown RBP1.95□□□□□ -2.1
PEP1YBL017C PAM1P37304 830 aaKnown RBP1.95□□□□□ -2.1
PEP1YBL017C ADE17P38009 592 aaKnown RBP1.95□□□□□ -2.1
PEP1YBL017C SWC5P38326 303 aa1.95□□□□□ -2.1
PEP1YBL017C NMD3P38861 518 aaKnown RBP1.95□□□□□ -2.1
PEP1YBL017C PRM9P39551 298 aa1.95□□□□□ -2.1
PEP1YBL017C SIP5P40210 489 aaKnown RBP1.95□□□□□ -2.1
PEP1YBL017C ELO3P40319 345 aa1.95□□□□□ -2.1
PEP1YBL017C GYP8P43570 497 aa1.95□□□□□ -2.1
PEP1YBL017C YJR054WP47114 497 aa1.95□□□□□ -2.1
PEP1YBL017C PEX14P53112 341 aa1.95□□□□□ -2.1
PEP1YBL017C YGR021WP53212 290 aa1.95□□□□□ -2.1
PEP1YBL017C YNL247WP53852 767 aaKnown RBP1.95□□□□□ -2.1
PEP1YBL017C ATG16Q03818 150 aa1.95□□□□□ -2.1
PEP1YBL017C GIS4Q04233 774 aa1.95□□□□□ -2.1
PEP1YBL017C MGR3Q04472 501 aa1.95□□□□□ -2.1
PEP1YBL017C IMA2Q08295 589 aa1.95□□□□□ -2.1
PEP1YBL017C OSH2Q12451 1283 aa1.95□□□□□ -2.1
PEP1YBL017C RPP2AP05319 106 aaKnown RBP1.95□□□□□ -2.1
PEP1YBL017C CAR2P07991 424 aaKnown RBP1.95□□□□□ -2.1
PEP1YBL017C ACE2P21192 770 aa1.95□□□□□ -2.1
PEP1YBL017C SCL1P21243 252 aaKnown RBP1.95□□□□□ -2.1
PEP1YBL017C KNS1P32350 737 aaPredicted RBP1.95□□□□□ -2.1
PEP1YBL017C IMP2'P32351 346 aa1.95□□□□□ -2.1
PEP1YBL017C FRE1P32791 686 aa1.95□□□□□ -2.1
PEP1YBL017C PRM1P53835 661 aa1.95□□□□□ -2.1
PEP1YBL017C EBS1Q03466 884 aaKnown RBP1.95□□□□□ -2.1
PEP1YBL017C YML083CQ04526 418 aa1.95□□□□□ -2.1
PEP1YBL017C HCR1Q05775 265 aaKnown RBP1.95□□□□□ -2.1
PEP1YBL017C PUF3Q07807 879 aaKnown RBP RIP-Chip data1.95□□□□□ -2.1not detected
PEP1YBL017C YDR061WQ12298 539 aa1.95□□□□□ -2.1
PEP1YBL017C HSP42Q12329 375 aa1.95□□□□□ -2.1
PEP1YBL017C NKP1Q12493 238 aa1.95□□□□□ -2.1
PEP1YBL017C YIL002W-AQ3E7Z5 69 aa1.95□□□□□ -2.1
PEP1YBL017C SWI5P08153 709 aa1.95□□□□□ -2.1
PEP1YBL017C RPL40AP0CH08 128 aaKnown RBP1.95□□□□□ -2.1
PEP1YBL017C RPL40BP0CH09 128 aaKnown RBP1.95□□□□□ -2.1
PEP1YBL017C GUT2P32191 649 aa1.95□□□□□ -2.1
PEP1YBL017C ECM32P32644 1121 aaKnown RBP1.95□□□□□ -2.1
PEP1YBL017C TFC3P34111 1160 aa1.95□□□□□ -2.1
PEP1YBL017C YBR053CP38235 358 aa1.95□□□□□ -2.1
PEP1YBL017C MGE1P38523 228 aa1.95□□□□□ -2.1
PEP1YBL017C DUN1P39009 513 aa1.95□□□□□ -2.1
PEP1YBL017C SMC3P47037 1230 aa1.95□□□□□ -2.1
PEP1YBL017C TIM54P47045 478 aa1.95□□□□□ -2.1
PEP1YBL017C PCL10P53124 433 aa1.95□□□□□ -2.1
PEP1YBL017C ERG5P54781 538 aa1.95□□□□□ -2.1
PEP1YBL017C TFB2Q02939 513 aa1.95□□□□□ -2.1
PEP1YBL017C NGL3Q03210 505 aa1.95□□□□□ -2.1
PEP1YBL017C HER2Q03557 464 aa1.95□□□□□ -2.1
PEP1YBL017C RRN11Q04712 507 aa1.95□□□□□ -2.1
PEP1YBL017C IWR1Q07532 353 aaPredicted RBP1.95□□□□□ -2.1
PEP1YBL017C CHL1P22516 861 aaPredicted RBP1.95□□□□□ -2.1
PEP1YBL017C VBA3P25594 458 aa1.95□□□□□ -2.1
PEP1YBL017C RPN2P32565 945 aaKnown RBP1.95□□□□□ -2.1
PEP1YBL017C SWI3P32591 825 aa1.95□□□□□ -2.1
PEP1YBL017C VBA5P36172 582 aa1.95□□□□□ -2.1
PEP1YBL017C TGL3P40308 642 aa1.95□□□□□ -2.1
PEP1YBL017C SCD6P45978 349 aaKnown RBP RIP-Chip data1.95□□□□□ -2.1 RIP-Chip
PEP1YBL017C DLD2P46681 530 aaKnown RBP1.95□□□□□ -2.1
PEP1YBL017C FAA4P47912 694 aaKnown RBP1.95□□□□□ -2.1
PEP1YBL017C YGL140CP53120 1219 aa1.95□□□□□ -2.1
PEP1YBL017C SDA1P53313 767 aaKnown RBP1.95□□□□□ -2.1
PEP1YBL017C EAF7P53911 425 aaKnown RBP1.95□□□□□ -2.1
PEP1YBL017C YLR413WQ06689 675 aa1.95□□□□□ -2.1
PEP1YBL017C VPS13Q07878 3144 aa1.94□□□□□ -2.1
PEP1YBL017C CLC1P17891 233 aa1.94□□□□□ -2.1
PEP1YBL017C DAL7P21826 554 aa1.94□□□□□ -2.1
PEP1YBL017C ROX1P25042 368 aa1.94□□□□□ -2.1
PEP1YBL017C GPI10P30777 616 aa1.94□□□□□ -2.1
PEP1YBL017C DUG2P38149 878 aa1.94□□□□□ -2.1
PEP1YBL017C VID24P38263 362 aa1.94□□□□□ -2.1
PEP1YBL017C ERC1P38767 581 aa1.94□□□□□ -2.1
PEP1YBL017C RVS167P39743 482 aaKnown RBP1.94□□□□□ -2.1
PEP1YBL017C YPL113CQ02961 396 aa1.94□□□□□ -2.1
PEP1YBL017C SND1Q04007 877 aa1.94□□□□□ -2.1
PEP1YBL017C BNA5Q05979 453 aa1.94□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 131.1 ms