RNA–Protein interactions for RNA: YAL004W

YAL004W, Transcript of Dubious open reading frame, yeast

Gene YAL004W, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YAL004W	YAL004W	XRS2	P33301	854 aa		3.97	□□□□□ -1.77
YAL004W	YAL004W	YPT53	P36019	220 aa		3.97	□□□□□ -1.77
YAL004W	YAL004W	BYE1	P36106	594 aa		3.97	□□□□□ -1.77
YAL004W	YAL004W	RIM11	P38615	370 aa		3.97	□□□□□ -1.77
YAL004W	YAL004W	YEL068C	P39977	110 aa		3.97	□□□□□ -1.77
YAL004W	YAL004W	VHR1	P40522	640 aa		3.97	□□□□□ -1.77
YAL004W	YAL004W	AXL1	P40851	1208 aa		3.97	□□□□□ -1.77
YAL004W	YAL004W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	3.97	□□□□□ -1.77	not detected
YAL004W	YAL004W	SAE2	P46946	345 aa		3.97	□□□□□ -1.77
YAL004W	YAL004W	SET2	P46995	733 aa	Known RBP	3.97	□□□□□ -1.77
YAL004W	YAL004W	HNT2	P49775	206 aa		3.97	□□□□□ -1.77
YAL004W	YAL004W	OCA1	P50946	238 aa	Predicted RBP	3.97	□□□□□ -1.77
YAL004W	YAL004W	AIM14	P53109	570 aa		3.97	□□□□□ -1.77
YAL004W	YAL004W	EAF7	P53911	425 aa	Known RBP	3.97	□□□□□ -1.77
YAL004W	YAL004W	ECM9	Q02202	377 aa		3.97	□□□□□ -1.77
YAL004W	YAL004W	LCD1	Q04377	747 aa		3.97	□□□□□ -1.77
YAL004W	YAL004W	DUS3	Q06053	668 aa	Known RBP	3.97	□□□□□ -1.77
YAL004W	YAL004W	EST2	Q06163	884 aa		3.97	□□□□□ -1.77
YAL004W	YAL004W	ATG33	Q06485	197 aa		3.97	□□□□□ -1.77
YAL004W	YAL004W	RSC3	Q06639	885 aa		3.97	□□□□□ -1.77
YAL004W	YAL004W	ADY3	Q07732	790 aa		3.97	□□□□□ -1.77
YAL004W	YAL004W	YLL054C	Q12244	843 aa		3.97	□□□□□ -1.77
YAL004W	YAL004W	DBP10	Q12389	995 aa	Known RBP	3.97	□□□□□ -1.77
YAL004W	YAL004W	KCS1	Q12494	1050 aa		3.97	□□□□□ -1.77
YAL004W	YAL004W	MLP1	Q02455	1875 aa	Known RBP	3.96	□□□□□ -1.77
YAL004W	YAL004W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	3.96	□□□□□ -1.78	not detected
YAL004W	YAL004W	LPD1	P09624	499 aa	Known RBP	3.96	□□□□□ -1.78
YAL004W	YAL004W	RED1	P14291	827 aa		3.96	□□□□□ -1.78
YAL004W	YAL004W	MET8	P15807	274 aa		3.96	□□□□□ -1.78
YAL004W	YAL004W	NFS1	P25374	497 aa		3.96	□□□□□ -1.78
YAL004W	YAL004W	RPC53	P25441	422 aa		3.96	□□□□□ -1.78
YAL004W	YAL004W	CDC48	P25694	835 aa	Known RBP	3.96	□□□□□ -1.78
YAL004W	YAL004W	MSP1	P28737	362 aa		3.96	□□□□□ -1.78
YAL004W	YAL004W	SWC3	P31376	625 aa		3.96	□□□□□ -1.78
YAL004W	YAL004W	PRO1	P32264	428 aa		3.96	□□□□□ -1.78
YAL004W	YAL004W	NGG1	P32494	702 aa		3.96	□□□□□ -1.78
YAL004W	YAL004W	MCD4	P36051	919 aa		3.96	□□□□□ -1.78
YAL004W	YAL004W	NUP133	P36161	1157 aa		3.96	□□□□□ -1.78
YAL004W	YAL004W	YRO2	P38079	344 aa		3.96	□□□□□ -1.78
YAL004W	YAL004W	CCZ1	P38273	704 aa		3.96	□□□□□ -1.78
YAL004W	YAL004W	YBR238C	P38330	731 aa	Known RBP	3.96	□□□□□ -1.78
YAL004W	YAL004W	TPA1	P40032	644 aa	Known RBP	3.96	□□□□□ -1.78
YAL004W	YAL004W	CCT5	P40413	562 aa	Known RBP	3.96	□□□□□ -1.78
YAL004W	YAL004W	DOT5	P40553	215 aa		3.96	□□□□□ -1.78
YAL004W	YAL004W	BNA2	P47125	453 aa		3.96	□□□□□ -1.78
YAL004W	YAL004W	ASK10	P48361	1146 aa		3.96	□□□□□ -1.78
YAL004W	YAL004W	RNR4	P49723	345 aa	Known RBP	3.96	□□□□□ -1.78
YAL004W	YAL004W	YAP1802	P53309	568 aa		3.96	□□□□□ -1.78
YAL004W	YAL004W	MOT3	P54785	490 aa	Known RBP	3.96	□□□□□ -1.78
YAL004W	YAL004W	CEG1	Q01159	459 aa	Predicted RBP	3.96	□□□□□ -1.78
YAL004W	YAL004W	PTA1	Q01329	785 aa	Predicted RBP	3.96	□□□□□ -1.78
YAL004W	YAL004W	NBA1	Q08229	501 aa	Known RBP	3.96	□□□□□ -1.78
YAL004W	YAL004W	SMF3	Q12078	473 aa	Predicted RBP	3.96	□□□□□ -1.78
YAL004W	YAL004W	SEM1	O94742	89 aa		3.95	□□□□□ -1.78
YAL004W	YAL004W	ADE8	P04161	214 aa		3.95	□□□□□ -1.78
YAL004W	YAL004W	SUP35	P05453	685 aa	Known RBP	3.95	□□□□□ -1.78
YAL004W	YAL004W	NOT3	P06102	836 aa	Known RBP	3.95	□□□□□ -1.78
YAL004W	YAL004W	HTS1	P07263	546 aa	Known RBP	3.95	□□□□□ -1.78
YAL004W	YAL004W	GLK1	P17709	500 aa	Known RBP	3.95	□□□□□ -1.78
YAL004W	YAL004W	TRX1	P22217	103 aa	Known RBP	3.95	□□□□□ -1.78
YAL004W	YAL004W	TOD6	P34219	525 aa		3.95	□□□□□ -1.78
YAL004W	YAL004W	MTH1	P35198	433 aa		3.95	□□□□□ -1.78
YAL004W	YAL004W	DEF1	P35732	738 aa	Known RBP	3.95	□□□□□ -1.78
YAL004W	YAL004W	YKL077W	P36081	392 aa		3.95	□□□□□ -1.78
YAL004W	YAL004W	YKR075C	P36155	307 aa		3.95	□□□□□ -1.78
YAL004W	YAL004W	SHM2	P37291	469 aa	Known RBP	3.95	□□□□□ -1.78
YAL004W	YAL004W	ECM21	P38167	1117 aa	Known RBP	3.95	□□□□□ -1.78
YAL004W	YAL004W	HSL7	P38274	827 aa		3.95	□□□□□ -1.78
YAL004W	YAL004W	NPR3	P38742	1146 aa		3.95	□□□□□ -1.78
YAL004W	YAL004W	SAW1	P39735	261 aa		3.95	□□□□□ -1.78
YAL004W	YAL004W	SIP5	P40210	489 aa	Known RBP	3.95	□□□□□ -1.78
YAL004W	YAL004W	RIC1	P40395	1056 aa		3.95	□□□□□ -1.78
YAL004W	YAL004W	MPH1	P40562	993 aa		3.95	□□□□□ -1.78
YAL004W	YAL004W	DJP1	P40564	432 aa		3.95	□□□□□ -1.78
YAL004W	YAL004W	HYR1	P40581	163 aa	Known RBP	3.95	□□□□□ -1.78
YAL004W	YAL004W	GYP8	P43570	497 aa		3.95	□□□□□ -1.78
YAL004W	YAL004W	YGL242C	P53066	181 aa		3.95	□□□□□ -1.78
YAL004W	YAL004W	DAM1	P53267	343 aa		3.95	□□□□□ -1.78
YAL004W	YAL004W	ZDS2	P54786	942 aa		3.95	□□□□□ -1.78
YAL004W	YAL004W	MRPL13	Q02204	264 aa		3.95	□□□□□ -1.78
YAL004W	YAL004W	ATP25	Q03153	612 aa		3.95	□□□□□ -1.78
YAL004W	YAL004W	CLU1	Q03690	1277 aa	Known RBP	3.95	□□□□□ -1.78
YAL004W	YAL004W	YHM2	Q04013	314 aa		3.95	□□□□□ -1.78
YAL004W	YAL004W	HLR1	Q04429	423 aa		3.95	□□□□□ -1.78
YAL004W	YAL004W	YMR111C	Q04461	462 aa	Predicted RBP	3.95	□□□□□ -1.78
YAL004W	YAL004W	YDR338C	Q05497	695 aa		3.95	□□□□□ -1.78
YAL004W	YAL004W	APL5	Q08951	932 aa	Known RBP	3.95	□□□□□ -1.78
YAL004W	YAL004W	YPL277C	Q08989	487 aa		3.95	□□□□□ -1.78
YAL004W	YAL004W	NCB2	Q92317	146 aa		3.95	□□□□□ -1.78
YAL004W	YAL004W	SSK22	P25390	1331 aa	Predicted RBP	3.95	□□□□□ -1.78
YAL004W	YAL004W	SAC3	P46674	1301 aa		3.95	□□□□□ -1.78
YAL004W	YAL004W	VAS1	P07806	1104 aa	Known RBP	3.94	□□□□□ -1.78
YAL004W	YAL004W	PMS1	P14242	873 aa		3.94	□□□□□ -1.78
YAL004W	YAL004W	VMA2	P16140	517 aa	Known RBP	3.94	□□□□□ -1.78
YAL004W	YAL004W	PDX1	P16451	410 aa		3.94	□□□□□ -1.78
YAL004W	YAL004W	HOP1	P20050	605 aa		3.94	□□□□□ -1.78
YAL004W	YAL004W	NPL6	P32832	435 aa		3.94	□□□□□ -1.78
YAL004W	YAL004W	SER1	P33330	395 aa	Known RBP	3.94	□□□□□ -1.78
YAL004W	YAL004W	APM3	P38153	483 aa		3.94	□□□□□ -1.78
YAL004W	YAL004W	RRF1	P38771	230 aa		3.94	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 31.8 ms