RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 FEN2P25621 512 aaKnown RBP9.75□□□□□ -0.85
NME1NME1 MTC7P32633 139 aa9.75□□□□□ -0.85
NME1NME1 BCS1P32839 456 aa9.75□□□□□ -0.85
NME1NME1 SHM2P37291 469 aaKnown RBP9.75□□□□□ -0.85
NME1NME1 COS111P38308 924 aa9.75□□□□□ -0.85
NME1NME1 VPS27P40343 622 aaKnown RBP9.75□□□□□ -0.85
NME1NME1 MDR1P53258 950 aa9.75□□□□□ -0.85
NME1NME1 NRD1P53617 575 aaKnown RBP RIP-Chip data9.75□□□□□ -0.85not detected
NME1NME1 ADY4Q05955 493 aa9.75□□□□□ -0.85
NME1NME1 AIM41Q12032 185 aa9.75□□□□□ -0.85
NME1NME1 VAS1P07806 1104 aaKnown RBP9.74□□□□□ -0.85
NME1NME1 DEF1P35732 738 aaKnown RBP9.74□□□□□ -0.85
NME1NME1 ACA1P39970 489 aa9.74□□□□□ -0.85
NME1NME1 HIM1Q06674 414 aa9.74□□□□□ -0.85
NME1NME1 YFT2Q06676 274 aa9.74□□□□□ -0.85
NME1NME1 BRE1Q07457 700 aaKnown RBP9.74□□□□□ -0.85
NME1NME1 HOS1Q12214 470 aa9.74□□□□□ -0.85
NME1NME1 ZRT2Q12436 422 aa9.74□□□□□ -0.85
NME1NME1 CBP3P21560 335 aa9.73□□□□□ -0.85
NME1NME1 PRP28P23394 588 aa9.73□□□□□ -0.85
NME1NME1 MSH1P25846 959 aa9.73□□□□□ -0.85
NME1NME1 MAD2P40958 196 aa9.73□□□□□ -0.85
NME1NME1 YCG1Q06680 1035 aa9.73□□□□□ -0.85
NME1NME1 CHS5Q12114 671 aaKnown RBP9.73□□□□□ -0.85
NME1NME1 ALG7P07286 448 aa9.72□□□□□ -0.85
NME1NME1 ADH4P10127 382 aa9.72□□□□□ -0.85
NME1NME1 RMA1P36001 430 aaKnown RBP9.72□□□□□ -0.85
NME1NME1 CRG1P38892 291 aaRIP-Chip data9.72□□□□□ -0.85not detected
NME1NME1 FMP52P40008 231 aa9.72□□□□□ -0.85
NME1NME1 FTR1P40088 404 aa9.72□□□□□ -0.85
NME1NME1 PAN2P53010 1115 aaPredicted RBP9.72□□□□□ -0.85
NME1NME1 ECM16Q04217 1267 aaKnown RBP9.72□□□□□ -0.85
NME1NME1 RGC1Q06108 1083 aaKnown RBP9.72□□□□□ -0.85
NME1NME1 URN1Q06525 465 aaKnown RBP9.72□□□□□ -0.85
NME1NME1 YKL033W-AQ86ZR7 236 aa9.72□□□□□ -0.85
NME1NME1 APA1P16550 321 aaKnown RBP9.71□□□□□ -0.86
NME1NME1 CDS1P38221 457 aa9.71□□□□□ -0.86
NME1NME1 SFB3P38810 929 aa9.71□□□□□ -0.86
NME1NME1 SWD1P39706 426 aa9.71□□□□□ -0.86
NME1NME1 TAH11P47112 604 aa9.71□□□□□ -0.86
NME1NME1 YNR071CP53757 342 aa9.71□□□□□ -0.86
NME1NME1 FDC1Q03034 503 aa9.71□□□□□ -0.86
NME1NME1 DIN7Q12086 430 aa9.71□□□□□ -0.86
NME1NME1 DBP10Q12389 995 aaKnown RBP9.71□□□□□ -0.86
NME1NME1 TUF1P02992 437 aaKnown RBP9.7□□□□□ -0.86
NME1NME1 SUL1P38359 859 aa9.7□□□□□ -0.86
NME1NME1 RFX1P48743 811 aa9.7□□□□□ -0.86
NME1NME1 TRI1Q05024 226 aa9.7□□□□□ -0.86
NME1NME1 PSR2Q07949 397 aa9.7□□□□□ -0.86
NME1NME1 YLR040CQ07988 224 aa9.7□□□□□ -0.86
NME1NME1 MCH5Q08777 521 aa9.7□□□□□ -0.86
NME1NME1 PPR1P07272 904 aaPredicted RBP9.69□□□□□ -0.86
NME1NME1 TUP1P16649 713 aa9.69□□□□□ -0.86
NME1NME1 PMI40P29952 429 aaKnown RBP9.69□□□□□ -0.86
NME1NME1 YKL222CP35995 705 aa9.69□□□□□ -0.86
NME1NME1 HRB1P38922 454 aaKnown RBP RIP-Chip data9.69□□□□□ -0.86not detected
NME1NME1 SIR3P06701 978 aa9.68□□□□□ -0.86
NME1NME1 SEC18P18759 758 aaKnown RBP9.68□□□□□ -0.86
NME1NME1 DBF20P32328 564 aa9.68□□□□□ -0.86
NME1NME1 NTH1P32356 751 aa9.68□□□□□ -0.86
NME1NME1 APM3P38153 483 aa9.68□□□□□ -0.86
NME1NME1 YLF2P38746 405 aa9.68□□□□□ -0.86
NME1NME1 MAD3P47074 515 aa9.68□□□□□ -0.86
NME1NME1 YAP1802P53309 568 aa9.68□□□□□ -0.86
NME1NME1 MOT3P54785 490 aaKnown RBP9.68□□□□□ -0.86
NME1NME1 SAP185P40856 1058 aa9.67□□□□□ -0.86
NME1NME1 IMA5P40884 581 aa9.67□□□□□ -0.86
NME1NME1 URA3P03962 267 aa9.66□□□□□ -0.86
NME1NME1 PHO11P35842 467 aa9.66□□□□□ -0.86
NME1NME1 PHO12P38693 467 aa9.66□□□□□ -0.86
NME1NME1 YDL183CP48569 320 aa9.66□□□□□ -0.86
NME1NME1 ESC8Q08119 714 aa9.66□□□□□ -0.86
NME1NME1 MSM1P22438 575 aa9.65□□□□□ -0.86
NME1NME1 ARG1P22768 420 aa9.65□□□□□ -0.86
NME1NME1 TMN3P40071 706 aa9.65□□□□□ -0.86
NME1NME1 MPS3P47069 682 aa9.65□□□□□ -0.86
NME1NME1 TEL2P53038 688 aa9.65□□□□□ -0.86
NME1NME1 SEC12P11655 471 aa9.64□□□□□ -0.87
NME1NME1 TRM2P33753 639 aa9.64□□□□□ -0.87
NME1NME1 EHT1P38295 451 aa9.64□□□□□ -0.87
NME1NME1 IRC24P40580 263 aa9.64□□□□□ -0.87
NME1NME1 FHN1P53279 174 aa9.64□□□□□ -0.87
NME1NME1 YOL073CQ08232 322 aa9.64□□□□□ -0.87
NME1NME1 YCR015CP25616 317 aa9.63□□□□□ -0.87
NME1NME1 RIA1P53893 1110 aa9.63□□□□□ -0.87
NME1NME1 TIM50Q02776 476 aa9.63□□□□□ -0.87
NME1NME1 BUD21Q08492 214 aaPredicted RBP9.63□□□□□ -0.87
NME1NME1 YEL025CP39991 1188 aa9.62□□□□□ -0.87
NME1NME1 ABF1P14164 731 aa9.61□□□□□ -0.87
NME1NME1 SWE1P32944 819 aa9.61□□□□□ -0.87
NME1NME1 PPS1P38148 807 aa9.61□□□□□ -0.87
NME1NME1 CTP1P38152 299 aa9.61□□□□□ -0.87
NME1NME1 RPT2P40327 437 aaKnown RBP9.61□□□□□ -0.87
NME1NME1 UBA2P52488 636 aa9.61□□□□□ -0.87
NME1NME1 BLS1Q06071 122 aa9.61□□□□□ -0.87
NME1NME1 MLH3Q12083 715 aa9.61□□□□□ -0.87
NME1NME1 PHO5P00635 467 aa9.6□□□□□ -0.87
NME1NME1 THR1P17423 357 aaKnown RBP9.6□□□□□ -0.87
NME1NME1 MSS1P32559 526 aaPredicted RBP9.6□□□□□ -0.87
NME1NME1 PPE1P38796 400 aa9.6□□□□□ -0.87
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms