RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 SYNE3Q6ZMZ3 975 aa14.28□□□□□ -0.12
NPC1-202ENST00000540608 CCDC150Q8NCX0 1101 aa14.28□□□□□ -0.12
NPC1-202ENST00000540608 ERO1AQ96HE7 468 aa14.28□□□□□ -0.12
NPC1-202ENST00000540608 XPO4Q9C0E2 1151 aaKnown RBP14.28□□□□□ -0.12
NPC1-202ENST00000540608 AKAP2Q9Y2D5 859 aa14.28□□□□□ -0.12
NPC1-202ENST00000540608 KIF20AO95235 890 aa14.27□□□□□ -0.12
NPC1-202ENST00000540608 CMA1P23946 247 aa14.27□□□□□ -0.12
NPC1-202ENST00000540608 HAND2P61296 217 aa14.27□□□□□ -0.12
NPC1-202ENST00000540608 TTC39AQ5SRH9 613 aa14.27□□□□□ -0.12
NPC1-202ENST00000540608 NCOA7Q8NI08 942 aa14.27□□□□□ -0.12
NPC1-202ENST00000540608 FBXO3Q9UK99 471 aa14.27□□□□□ -0.12
NPC1-202ENST00000540608 NWD2Q9ULI1 1742 aa14.27□□□□□ -0.13
NPC1-202ENST00000540608 WDR19Q8NEZ3 1342 aa14.27□□□□□ -0.13
NPC1-202ENST00000540608 GOLGA8BA8MQT2 603 aa14.27□□□□□ -0.13
NPC1-202ENST00000540608 TPM4P67936 248 aa14.27□□□□□ -0.13
NPC1-202ENST00000540608 ANO1Q5XXA6 986 aa14.27□□□□□ -0.13
NPC1-202ENST00000540608 ZNF397Q8NF99 534 aaPredicted RBP14.27□□□□□ -0.13
NPC1-202ENST00000540608 XAGE2Q96GT9 111 aa14.27□□□□□ -0.13
NPC1-202ENST00000540608 IFNKQ9P0W0 207 aa14.27□□□□□ -0.13
NPC1-202ENST00000540608 COL5A2P05997 1499 aaPredicted RBP14.26□□□□□ -0.13
NPC1-202ENST00000540608 CPLX1O14810 134 aa14.26□□□□□ -0.13
NPC1-202ENST00000540608 KCNJ6P48051 423 aa14.26□□□□□ -0.13
NPC1-202ENST00000540608 NKX1-1Q15270 411 aaPredicted RBP14.26□□□□□ -0.13
NPC1-202ENST00000540608 AXDND1Q5T1B0 1012 aaPredicted RBP14.26□□□□□ -0.13
NPC1-202ENST00000540608 GORABQ5T7V8 394 aa14.26□□□□□ -0.13
NPC1-202ENST00000540608 ZNF335Q9H4Z2 1342 aaPredicted RBP14.26□□□□□ -0.13
NPC1-202ENST00000540608 PAPPAQ13219 1627 aa14.26□□□□□ -0.13
NPC1-202ENST00000540608 SMC2O95347 1197 aa14.26□□□□□ -0.13
NPC1-202ENST00000540608 SLU7O95391 586 aaKnown RBP14.26□□□□□ -0.13
NPC1-202ENST00000540608 ANTXR2P58335 489 aa14.26□□□□□ -0.13
NPC1-202ENST00000540608 NCAPHQ15003 741 aa14.26□□□□□ -0.13
NPC1-202ENST00000540608 CCDC57Q2TAC2 916 aa14.26□□□□□ -0.13
NPC1-202ENST00000540608 E4F1Q66K89 784 aaPredicted RBP14.26□□□□□ -0.13
NPC1-202ENST00000540608 ARMCX5Q6P1M9 558 aa14.26□□□□□ -0.13
NPC1-202ENST00000540608 APPBP2Q92624 585 aa14.26□□□□□ -0.13
NPC1-202ENST00000540608 PSDA5PKW4 1024 aaPredicted RBP14.25□□□□□ -0.13
NPC1-202ENST00000540608 KIF28PB7ZC32 967 aa14.25□□□□□ -0.13
NPC1-202ENST00000540608 ZNF213O14771 459 aa14.25□□□□□ -0.13
NPC1-202ENST00000540608 ADORA1P30542 326 aa14.25□□□□□ -0.13
NPC1-202ENST00000540608 KIF23Q02241 960 aaPredicted RBP14.25□□□□□ -0.13
NPC1-202ENST00000540608 TMC6Q7Z403 805 aa14.25□□□□□ -0.13
NPC1-202ENST00000540608 TIGD1Q96MW7 591 aa14.25□□□□□ -0.13
NPC1-202ENST00000540608 TUBB4AP04350 444 aa14.25□□□□□ -0.13
NPC1-202ENST00000540608 IL2RBP14784 551 aa14.25□□□□□ -0.13
NPC1-202ENST00000540608 RALYLQ86SE5 291 aaKnown RBP14.25□□□□□ -0.13
NPC1-202ENST00000540608 PUS7LQ9H0K6 701 aaKnown RBP14.25□□□□□ -0.13
NPC1-202ENST00000540608 IKBKBO14920 756 aa14.24□□□□□ -0.13
NPC1-202ENST00000540608 PFKFB1P16118 471 aa14.24□□□□□ -0.13
NPC1-202ENST00000540608 SFPQP23246 707 aaKnown RBP eCLIP14.24□□□□□ -0.13
NPC1-202ENST00000540608 SLC39A14Q15043 492 aa14.24□□□□□ -0.13
NPC1-202ENST00000540608 KMT5BQ4FZB7 885 aa14.24□□□□□ -0.13
NPC1-202ENST00000540608 PPP1R13BQ96KQ4 1090 aa14.24□□□□□ -0.13
NPC1-202ENST00000540608 GJB4Q9NTQ9 266 aa14.24□□□□□ -0.13
NPC1-202ENST00000540608 TNS2Q63HR2 1409 aa14.24□□□□□ -0.13
NPC1-202ENST00000540608 BIN1O00499 593 aa14.24□□□□□ -0.13
NPC1-202ENST00000540608 GABPB1Q06547 395 aaPredicted RBP14.24□□□□□ -0.13
NPC1-202ENST00000540608 ISCA1Q9BUE6 129 aa14.24□□□□□ -0.13
NPC1-202ENST00000540608 ZNF330Q9Y3S2 320 aaPredicted RBP14.24□□□□□ -0.13
NPC1-202ENST00000540608 ABCC12Q96J65 1359 aa14.24□□□□□ -0.13
NPC1-202ENST00000540608 SHANK3Q9BYB0 1731 aa14.24□□□□□ -0.13
NPC1-202ENST00000540608 WDHD1O75717 1129 aaPredicted RBP14.23□□□□□ -0.13
NPC1-202ENST00000540608 ZAP70P43403 619 aa14.23□□□□□ -0.13
NPC1-202ENST00000540608 SCARF1Q14162 830 aa14.23□□□□□ -0.13
NPC1-202ENST00000540608 L2HGDHQ9H9P8 463 aa14.23□□□□□ -0.13
NPC1-202ENST00000540608 NRDCO43847 1150 aa14.23□□□□□ -0.13
NPC1-202ENST00000540608 CCDC85AQ96PX6 553 aaPredicted RBP14.23□□□□□ -0.13
NPC1-202ENST00000540608 STRN4Q9NRL3 753 aa14.23□□□□□ -0.13
NPC1-202ENST00000540608 DDX60Q8IY21 1712 aaKnown RBP14.23□□□□□ -0.13
NPC1-202ENST00000540608 GPAA1O43292 621 aa14.22□□□□□ -0.13
NPC1-202ENST00000540608 RAB11FIP4Q86YS3 637 aa14.22□□□□□ -0.13
NPC1-202ENST00000540608 CARD10Q9BWT7 1032 aa14.22□□□□□ -0.13
NPC1-202ENST00000540608 BCL11BQ9C0K0 894 aaPredicted RBP14.22□□□□□ -0.13
NPC1-202ENST00000540608 FAM53CQ9NYF3 392 aa14.22□□□□□ -0.13
NPC1-202ENST00000540608 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.22□□□□□ -0.131e-6■■■□□ 17.2
NPC1-202ENST00000540608 TUBE1Q9UJT0 475 aa14.22□□□□□ -0.13
NPC1-202ENST00000540608 V9GYY5 206 aaPredicted RBP14.22□□□□□ -0.13
NPC1-202ENST00000540608 FANCCQ00597 558 aa14.22□□□□□ -0.13
NPC1-202ENST00000540608 TCIRG1Q13488 830 aa14.22□□□□□ -0.13
NPC1-202ENST00000540608 HPSEQ9Y251 543 aa14.22□□□□□ -0.13
NPC1-202ENST00000540608 PPP6R2O75170 966 aa14.22□□□□□ -0.13
NPC1-202ENST00000540608 SYKP43405 635 aa14.22□□□□□ -0.13
NPC1-202ENST00000540608 ELF2Q15723 593 aa14.22□□□□□ -0.13
NPC1-202ENST00000540608 LTBP4Q8N2S1 1624 aa14.21□□□□□ -0.13
NPC1-202ENST00000540608 ZMYM6O95789 1325 aa14.21□□□□□ -0.13
NPC1-202ENST00000540608 MARCKSP29966 332 aaPredicted RBP14.21□□□□□ -0.13
NPC1-202ENST00000540608 TRDNQ13061 729 aa14.21□□□□□ -0.13
NPC1-202ENST00000540608 CCDC93Q567U6 631 aa14.21□□□□□ -0.13
NPC1-202ENST00000540608 FBXO38Q6PIJ6 1188 aa14.21□□□□□ -0.13
NPC1-202ENST00000540608 FAM89AQ96GI7 184 aa14.21□□□□□ -0.13
NPC1-202ENST00000540608 HSD3B7Q9H2F3 369 aa14.21□□□□□ -0.13
NPC1-202ENST00000540608 SOS2Q07890 1332 aaPredicted RBP14.21□□□□□ -0.13
NPC1-202ENST00000540608 C4AP0C0L4 1744 aa14.21□□□□□ -0.13
NPC1-202ENST00000540608 C4BP0C0L5 1744 aa14.21□□□□□ -0.13
NPC1-202ENST00000540608 FAM237AA0A1B0GTK4 181 aa14.21□□□□□ -0.14
NPC1-202ENST00000540608 CDKL5O76039 1030 aa14.21□□□□□ -0.14
NPC1-202ENST00000540608 LMOD1P29536 600 aaPredicted RBP14.21□□□□□ -0.14
NPC1-202ENST00000540608 TRIM28Q13263 835 aaKnown RBP14.21□□□□□ -0.14
NPC1-202ENST00000540608 HSP90AB3PQ58FF7 597 aa14.21□□□□□ -0.14
NPC1-202ENST00000540608 KRT222Q8N1A0 295 aa14.21□□□□□ -0.14
NPC1-202ENST00000540608 ALG1Q9BT22 464 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms