RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 KCNJ6P48051 423 aa9.74□□□□□ -0.85
CSTF3-208ENST00000528865 NDUFA8P51970 172 aa9.74□□□□□ -0.85
CSTF3-208ENST00000528865 FOSBP53539 338 aa9.74□□□□□ -0.85
CSTF3-208ENST00000528865 CCZ1BP86790 482 aa9.74□□□□□ -0.85
CSTF3-208ENST00000528865 CCZ1P86791 482 aaPredicted RBP9.74□□□□□ -0.85
CSTF3-208ENST00000528865 SF3A1Q15459 793 aaKnown RBP9.74□□□□□ -0.85
CSTF3-208ENST00000528865 OTUD7BQ6GQQ9 843 aa9.74□□□□□ -0.85
CSTF3-208ENST00000528865 NYAP1Q6ZVC0 841 aa9.74□□□□□ -0.85
CSTF3-208ENST00000528865 RALYLQ86SE5 291 aaKnown RBP9.74□□□□□ -0.85
CSTF3-208ENST00000528865 NLRP10Q86W26 655 aa9.74□□□□□ -0.85
CSTF3-208ENST00000528865 DNAJC10Q8IXB1 793 aa9.74□□□□□ -0.85
CSTF3-208ENST00000528865 FAM89AQ96GI7 184 aa9.74□□□□□ -0.85
CSTF3-208ENST00000528865 NBPF3Q9H094 633 aa9.74□□□□□ -0.85
CSTF3-208ENST00000528865 TUBE1Q9UJT0 475 aa9.74□□□□□ -0.85
CSTF3-208ENST00000528865 ZMYM6O95789 1325 aa9.74□□□□□ -0.85
CSTF3-208ENST00000528865 A0A1B0GVL5 298 aa9.73□□□□□ -0.85
CSTF3-208ENST00000528865 TCRBV5S4A2TA0A5A2 114 aa9.73□□□□□ -0.85
CSTF3-208ENST00000528865 ANKRD18BA2A2Z9 1011 aa9.73□□□□□ -0.85
CSTF3-208ENST00000528865 GOLGA8BA8MQT2 603 aa9.73□□□□□ -0.85
CSTF3-208ENST00000528865 KIF28PB7ZC32 967 aa9.73□□□□□ -0.85
CSTF3-208ENST00000528865 CDKL5O76039 1030 aa9.73□□□□□ -0.85
CSTF3-208ENST00000528865 ZNF202O95125 648 aa9.73□□□□□ -0.85
CSTF3-208ENST00000528865 STARD3NLO95772 234 aa9.73□□□□□ -0.85
CSTF3-208ENST00000528865 TUBB4AP04350 444 aa9.73□□□□□ -0.85
CSTF3-208ENST00000528865 FGFR2P21802 821 aa9.73□□□□□ -0.85
CSTF3-208ENST00000528865 ARID4AP29374 1257 aaPredicted RBP9.73□□□□□ -0.85
CSTF3-208ENST00000528865 MCAMP43121 646 aa9.73□□□□□ -0.85
CSTF3-208ENST00000528865 HAND2P61296 217 aa9.73□□□□□ -0.85
CSTF3-208ENST00000528865 NCAPHQ15003 741 aa9.73□□□□□ -0.85
CSTF3-208ENST00000528865 PTPAQ15257 358 aa9.73□□□□□ -0.85
CSTF3-208ENST00000528865 TPD52L1Q16890 204 aaPredicted RBP9.73□□□□□ -0.85
CSTF3-208ENST00000528865 TAF7LQ5H9L4 462 aa9.73□□□□□ -0.85
CSTF3-208ENST00000528865 SYNE3Q6ZMZ3 975 aa9.73□□□□□ -0.85
CSTF3-208ENST00000528865 NBPF11Q86T75 865 aa9.73□□□□□ -0.85
CSTF3-208ENST00000528865 PDCL2Q8N4E4 241 aa9.73□□□□□ -0.85
CSTF3-208ENST00000528865 PIGBQ92521 554 aa9.73□□□□□ -0.85
CSTF3-208ENST00000528865 TMEM87BQ96K49 555 aa9.73□□□□□ -0.85
CSTF3-208ENST00000528865 SDF4Q9BRK5 362 aa9.73□□□□□ -0.85
CSTF3-208ENST00000528865 TMOD3Q9NYL9 352 aa9.73□□□□□ -0.85
CSTF3-208ENST00000528865 NAP1L2Q9ULW6 460 aaPredicted RBP9.73□□□□□ -0.85
CSTF3-208ENST00000528865 ANGEL1Q9UNK9 670 aaKnown RBP9.73□□□□□ -0.85
CSTF3-208ENST00000528865 HPSEQ9Y251 543 aa9.73□□□□□ -0.85
CSTF3-208ENST00000528865 DDX60Q8IY21 1712 aaKnown RBP9.73□□□□□ -0.85
CSTF3-208ENST00000528865 SHANK3Q9BYB0 1731 aa9.73□□□□□ -0.85
CSTF3-208ENST00000528865 ERVV-1B6SEH8 477 aa9.72□□□□□ -0.85
CSTF3-208ENST00000528865 KIF2AO00139 706 aaPredicted RBP9.72□□□□□ -0.85
CSTF3-208ENST00000528865 CPLX1O14810 134 aa9.72□□□□□ -0.85
CSTF3-208ENST00000528865 IKBKBO14920 756 aa9.72□□□□□ -0.85
CSTF3-208ENST00000528865 MYO1BO43795 1136 aa9.72□□□□□ -0.85
CSTF3-208ENST00000528865 WDHD1O75717 1129 aaPredicted RBP9.72□□□□□ -0.85
CSTF3-208ENST00000528865 PDE8BO95263 885 aa9.72□□□□□ -0.85
CSTF3-208ENST00000528865 SLC3A2P08195 630 aaKnown RBP9.72□□□□□ -0.85
CSTF3-208ENST00000528865 SKILP12757 684 aa9.72□□□□□ -0.85
CSTF3-208ENST00000528865 ITGA6P23229 1130 aa9.72□□□□□ -0.85
CSTF3-208ENST00000528865 U2AF2P26368 475 aaKnown RBP eCLIP9.72□□□□□ -0.85
CSTF3-208ENST00000528865 LIFRP42702 1097 aa9.72□□□□□ -0.85
CSTF3-208ENST00000528865 TRDNQ13061 729 aa9.72□□□□□ -0.85
CSTF3-208ENST00000528865 ARID5BQ14865 1188 aa9.72□□□□□ -0.85
CSTF3-208ENST00000528865 NTRK3Q16288 839 aa9.72□□□□□ -0.85
CSTF3-208ENST00000528865 HLFQ16534 295 aa9.72□□□□□ -0.85
CSTF3-208ENST00000528865 METTL24Q5JXM2 366 aa9.72□□□□□ -0.85
CSTF3-208ENST00000528865 CEP135Q66GS9 1140 aa9.72□□□□□ -0.85
CSTF3-208ENST00000528865 CYB5R4Q7L1T6 521 aa9.72□□□□□ -0.85
CSTF3-208ENST00000528865 SGMS1Q86VZ5 419 aa9.72□□□□□ -0.85
CSTF3-208ENST00000528865 CCAR2Q8N163 923 aaKnown RBP9.72□□□□□ -0.85
CSTF3-208ENST00000528865 AOPEPQ8N6M6 819 aa9.72□□□□□ -0.85
CSTF3-208ENST00000528865 IGDCC4Q8TDY8 1250 aa9.72□□□□□ -0.85
CSTF3-208ENST00000528865 AK7Q96M32 723 aa9.72□□□□□ -0.85
CSTF3-208ENST00000528865 STRBPQ96SI9 672 aaKnown RBP9.72□□□□□ -0.85
CSTF3-208ENST00000528865 FEZ1Q99689 392 aa9.72□□□□□ -0.85
CSTF3-208ENST00000528865 MTA3Q9BTC8 594 aa9.72□□□□□ -0.85
CSTF3-208ENST00000528865 PIH1D3Q9NQM4 214 aaKnown RBP9.72□□□□□ -0.85
CSTF3-208ENST00000528865 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.72□□□□□ -0.85
CSTF3-208ENST00000528865 FAM217BQ9NTX9 383 aaPredicted RBP9.72□□□□□ -0.85
CSTF3-208ENST00000528865 STK36Q9NRP7 1315 aa9.72□□□□□ -0.85
CSTF3-208ENST00000528865 NID2Q14112 1375 aa9.72□□□□□ -0.85
CSTF3-208ENST00000528865 AKAP11Q9UKA4 1901 aa9.72□□□□□ -0.85
CSTF3-208ENST00000528865 PSDA5PKW4 1024 aaPredicted RBP9.71□□□□□ -0.86
CSTF3-208ENST00000528865 PATL2C9JE40 543 aaKnown RBP9.71□□□□□ -0.86
CSTF3-208ENST00000528865 PDE8AO60658 829 aa9.71□□□□□ -0.86
CSTF3-208ENST00000528865 POLR3DP05423 398 aaPredicted RBP9.71□□□□□ -0.86
CSTF3-208ENST00000528865 PFKFB1P16118 471 aa9.71□□□□□ -0.86
CSTF3-208ENST00000528865 CTSWP56202 376 aa9.71□□□□□ -0.86
CSTF3-208ENST00000528865 NCBP1Q09161 790 aaKnown RBP9.71□□□□□ -0.86
CSTF3-208ENST00000528865 PTPN14Q15678 1187 aa9.71□□□□□ -0.86
CSTF3-208ENST00000528865 KRT40Q6A162 431 aa9.71□□□□□ -0.86
CSTF3-208ENST00000528865 CPLX2Q6PUV4 134 aaKnown RBP9.71□□□□□ -0.86
CSTF3-208ENST00000528865 LDHAL6AQ6ZMR3 332 aa9.71□□□□□ -0.86
CSTF3-208ENST00000528865 TBC1D10CQ8IV04 446 aa9.71□□□□□ -0.86
CSTF3-208ENST00000528865 JMYQ8N9B5 988 aa9.71□□□□□ -0.86
CSTF3-208ENST00000528865 CCDC150Q8NCX0 1101 aa9.71□□□□□ -0.86
CSTF3-208ENST00000528865 CCDC112Q8NEF3 446 aa9.71□□□□□ -0.86
CSTF3-208ENST00000528865 NKX2-3Q8TAU0 364 aa9.71□□□□□ -0.86
CSTF3-208ENST00000528865 MAP3K14Q99558 947 aa9.71□□□□□ -0.86
CSTF3-208ENST00000528865 ALG1Q9BT22 464 aa9.71□□□□□ -0.86
CSTF3-208ENST00000528865 GREM2Q9H772 168 aa9.71□□□□□ -0.86
CSTF3-208ENST00000528865 ASAP1Q9ULH1 1129 aa9.71□□□□□ -0.86
CSTF3-208ENST00000528865 C4AP0C0L4 1744 aa9.7□□□□□ -0.86
CSTF3-208ENST00000528865 C4BP0C0L5 1744 aa9.7□□□□□ -0.86
CSTF3-208ENST00000528865 A0A087WWV3 80 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms