RNA–Protein interactions for RNA: ENST00000506611.1

TRIO-208, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 526 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-208ENST00000506611 ZDHHC13Q8IUH4 622 aa7.85□□□□□ -1.15
TRIO-208ENST00000506611 IVNS1ABPQ9Y6Y0 642 aa7.85□□□□□ -1.15
TRIO-208ENST00000506611 SART1O43290 800 aaKnown RBP7.84□□□□□ -1.15
TRIO-208ENST00000506611 TGFB1P01137 390 aa7.84□□□□□ -1.15
TRIO-208ENST00000506611 MAOBP27338 520 aa7.84□□□□□ -1.15
TRIO-208ENST00000506611 EXOSC6Q5RKV6 272 aaKnown RBP7.84□□□□□ -1.15
TRIO-208ENST00000506611 NUTM2GQ5VZR2 741 aa7.84□□□□□ -1.15
TRIO-208ENST00000506611 BEND4Q6ZU67 534 aa7.84□□□□□ -1.15
TRIO-208ENST00000506611 SLC51AQ86UW1 340 aa7.84□□□□□ -1.15
TRIO-208ENST00000506611 FAM83CQ9BQN1 747 aa7.84□□□□□ -1.15
TRIO-208ENST00000506611 TMEM238LA0A1B0GVL6 79 aa7.83□□□□□ -1.16
TRIO-208ENST00000506611 PRR19A6NJB7 356 aa7.83□□□□□ -1.16
TRIO-208ENST00000506611 TREHO43280 583 aa7.83□□□□□ -1.16
TRIO-208ENST00000506611 RNF43Q68DV7 783 aa7.83□□□□□ -1.16
TRIO-208ENST00000506611 CLEC10AQ8IUN9 316 aa7.83□□□□□ -1.16
TRIO-208ENST00000506611 C12orf50Q8NA57 414 aaPredicted RBP7.83□□□□□ -1.16
TRIO-208ENST00000506611 C2CD4AQ8NCU7 369 aaPredicted RBP7.83□□□□□ -1.16
TRIO-208ENST00000506611 GADD45BO75293 160 aaPredicted RBP7.82□□□□□ -1.16
TRIO-208ENST00000506611 MAP4P27816 1152 aaKnown RBP7.82□□□□□ -1.16
TRIO-208ENST00000506611 MAPK1P28482 360 aa7.82□□□□□ -1.16
TRIO-208ENST00000506611 CD97P48960 835 aa7.82□□□□□ -1.16
TRIO-208ENST00000506611 PTPN12Q05209 780 aaKnown RBP7.82□□□□□ -1.16
TRIO-208ENST00000506611 SHISA5Q8N114 240 aa7.82□□□□□ -1.16
TRIO-208ENST00000506611 SETDB2Q96T68 719 aa7.82□□□□□ -1.16
TRIO-208ENST00000506611 KCNF1Q9H3M0 494 aa7.82□□□□□ -1.16
TRIO-208ENST00000506611 CYP4F12Q9HCS2 524 aa7.82□□□□□ -1.16
TRIO-208ENST00000506611 HIF3AQ9Y2N7 669 aa7.82□□□□□ -1.16
TRIO-208ENST00000506611 ABCC9O60706 1549 aa7.82□□□□□ -1.16
TRIO-208ENST00000506611 SSTR4P31391 388 aa7.81□□□□□ -1.16
TRIO-208ENST00000506611 POU4F3Q15319 338 aa7.81□□□□□ -1.16
TRIO-208ENST00000506611 ENOX2Q16206 610 aaKnown RBP7.81□□□□□ -1.16
TRIO-208ENST00000506611 CDPF1Q6NVV7 123 aa7.81□□□□□ -1.16
TRIO-208ENST00000506611 DBNDD2Q9BQY9 259 aa7.81□□□□□ -1.16
TRIO-208ENST00000506611 PNMA6FA0A0J9YX94 578 aa7.8□□□□□ -1.16
TRIO-208ENST00000506611 GSC2O15499 205 aa7.8□□□□□ -1.16
TRIO-208ENST00000506611 GAS2O43903 313 aaKnown RBP7.8□□□□□ -1.16
TRIO-208ENST00000506611 CYP11A1P05108 521 aa7.8□□□□□ -1.16
TRIO-208ENST00000506611 ADH5P11766 374 aa7.8□□□□□ -1.16
TRIO-208ENST00000506611 ZNF157P51786 506 aaPredicted RBP7.8□□□□□ -1.16
TRIO-208ENST00000506611 SOX4Q06945 474 aaPredicted RBP7.8□□□□□ -1.16
TRIO-208ENST00000506611 SHKBP1Q8TBC3 707 aa7.79□□□□□ -1.16
TRIO-208ENST00000506611 FBLIM1Q8WUP2 373 aa7.79□□□□□ -1.16
TRIO-208ENST00000506611 ACTL7BQ9Y614 415 aa7.79□□□□□ -1.16
TRIO-208ENST00000506611 FCGRTP55899 365 aa7.78□□□□□ -1.16
TRIO-208ENST00000506611 KCNA1Q09470 495 aa7.78□□□□□ -1.16
TRIO-208ENST00000506611 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.78□□□□□ -1.16
TRIO-208ENST00000506611 RPS26P11Q5JNZ5 115 aaPredicted RBP7.78□□□□□ -1.16
TRIO-208ENST00000506611 WDR89Q96FK6 387 aaPredicted RBP7.78□□□□□ -1.16
TRIO-208ENST00000506611 MFSD14AQ96MC6 490 aa7.78□□□□□ -1.16
TRIO-208ENST00000506611 BCO2Q9BYV7 579 aa7.78□□□□□ -1.16
TRIO-208ENST00000506611 TRAK1Q9UPV9 953 aa7.78□□□□□ -1.16
TRIO-208ENST00000506611 KIAA1324LA8MWY0 1029 aaPredicted RBP7.77□□□□□ -1.17
TRIO-208ENST00000506611 ADAMTS4O75173 837 aa7.77□□□□□ -1.17
TRIO-208ENST00000506611 PLCB3Q01970 1234 aa7.77□□□□□ -1.17
TRIO-208ENST00000506611 FMR1Q06787 632 aaKnown RBP eCLIP7.77□□□□□ -1.17
TRIO-208ENST00000506611 NXPE4Q6UWF7 544 aa7.77□□□□□ -1.17
TRIO-208ENST00000506611 EZH1Q92800 747 aaPredicted RBP7.77□□□□□ -1.17
TRIO-208ENST00000506611 WDR18Q9BV38 432 aa7.77□□□□□ -1.17
TRIO-208ENST00000506611 TRAIPQ9BWF2 469 aa7.77□□□□□ -1.17
TRIO-208ENST00000506611 FAM105AQ9NUU6 356 aa7.77□□□□□ -1.17
TRIO-208ENST00000506611 ADMP35318 185 aa7.76□□□□□ -1.17
TRIO-208ENST00000506611 AKAP4Q5JQC9 854 aa7.76□□□□□ -1.17
TRIO-208ENST00000506611 C3orf58Q8NDZ4 430 aa7.76□□□□□ -1.17
TRIO-208ENST00000506611 STK35Q8TDR2 534 aa7.76□□□□□ -1.17
TRIO-208ENST00000506611 CORO1BQ9BR76 489 aa7.76□□□□□ -1.17
TRIO-208ENST00000506611 GSX1Q9H4S2 264 aaPredicted RBP7.76□□□□□ -1.17
TRIO-208ENST00000506611 CCDC86Q9H6F5 360 aaKnown RBP7.76□□□□□ -1.17
TRIO-208ENST00000506611 WWC3Q9ULE0 1092 aa7.76□□□□□ -1.17
TRIO-208ENST00000506611 PPP1R9AQ9ULJ8 1098 aa7.76□□□□□ -1.17
TRIO-208ENST00000506611 FAM95CA0A1B0GW59 222 aa7.75□□□□□ -1.17
TRIO-208ENST00000506611 AOC2O75106 756 aa7.75□□□□□ -1.17
TRIO-208ENST00000506611 F13BP05160 661 aa7.75□□□□□ -1.17
TRIO-208ENST00000506611 RXRBP28702 533 aa7.75□□□□□ -1.17
TRIO-208ENST00000506611 HOXA10P31260 410 aaPredicted RBP7.75□□□□□ -1.17
TRIO-208ENST00000506611 DTHD1Q6ZMT9 781 aa7.75□□□□□ -1.17
TRIO-208ENST00000506611 PDZD3Q86UT5 571 aa7.75□□□□□ -1.17
TRIO-208ENST00000506611 GATA6Q92908 595 aa7.75□□□□□ -1.17
TRIO-208ENST00000506611 ASB16Q96NS5 453 aa7.75□□□□□ -1.17
TRIO-208ENST00000506611 ZC3H12CQ9C0D7 883 aaKnown RBP7.75□□□□□ -1.17
TRIO-208ENST00000506611 PCMTD2Q9NV79 361 aa7.75□□□□□ -1.17
TRIO-208ENST00000506611 NLRP2Q9NX02 1062 aa7.75□□□□□ -1.17
TRIO-208ENST00000506611 WDR64B1ANS9 1081 aa7.74□□□□□ -1.17
TRIO-208ENST00000506611 ZNF862O60290 1169 aa7.74□□□□□ -1.17
TRIO-208ENST00000506611 EIF4EBP3O60516 100 aaPredicted RBP7.74□□□□□ -1.17
TRIO-208ENST00000506611 USP11P51784 963 aa7.74□□□□□ -1.17
TRIO-208ENST00000506611 AP3B2Q13367 1082 aa7.74□□□□□ -1.17
TRIO-208ENST00000506611 NBPF11Q86T75 865 aa7.74□□□□□ -1.17
TRIO-208ENST00000506611 FBXL6Q8N531 539 aa7.74□□□□□ -1.17
TRIO-208ENST00000506611 KRTAP4-8Q9BYQ9 185 aa7.74□□□□□ -1.17
TRIO-208ENST00000506611 SEMA6CQ9H3T2 930 aa7.74□□□□□ -1.17
TRIO-208ENST00000506611 COBLO75128 1261 aa7.73□□□□□ -1.17
TRIO-208ENST00000506611 LIG1P18858 919 aa7.73□□□□□ -1.17
TRIO-208ENST00000506611 SPINK2P20155 84 aa7.73□□□□□ -1.17
TRIO-208ENST00000506611 MAPK8P45983 427 aa7.73□□□□□ -1.17
TRIO-208ENST00000506611 NFKBIBQ15653 356 aa7.73□□□□□ -1.17
TRIO-208ENST00000506611 OSBPL7Q9BZF2 842 aa7.73□□□□□ -1.17
TRIO-208ENST00000506611 ACSS3Q9H6R3 686 aa7.73□□□□□ -1.17
TRIO-208ENST00000506611 PRKAG2Q9UGJ0 569 aa7.73□□□□□ -1.17
TRIO-208ENST00000506611 AP4E1Q9UPM8 1137 aa7.73□□□□□ -1.17
TRIO-208ENST00000506611 PCDHGC5Q9Y5F6 944 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms